RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, humanhuman

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-209ENST00000542896 EFCAB2Q5VUJ9 269 aa42.68■■■■■ 4.42
PDCD2-209ENST00000542896 RIMS1Q86UR5 1692 aaKnown RBP42.62■■■■■ 4.41
PDCD2-209ENST00000542896 TROQ12816 1431 aaPredicted RBP42.61■■■■■ 4.41
PDCD2-209ENST00000542896 PCF11O94913 1555 aaKnown RBP42.58■■■■■ 4.41
PDCD2-209ENST00000542896 CLIP1P30622 1438 aa42.58■■■■■ 4.41
PDCD2-209ENST00000542896 MYO5CQ9NQX4 1742 aa42.57■■■■■ 4.41
PDCD2-209ENST00000542896 KIF14Q15058 1648 aa42.57■■■■■ 4.41
PDCD2-209ENST00000542896 MLECQ14165 292 aa42.57■■■■■ 4.41
PDCD2-209ENST00000542896 PLPPR3Q6T4P5 718 aa42.57■■■■■ 4.41
PDCD2-209ENST00000542896 LMTK3Q96Q04 1460 aa42.54■■■■■ 4.4
PDCD2-209ENST00000542896 SIGLEC1Q9BZZ2 1709 aa42.51■■■■■ 4.4
PDCD2-209ENST00000542896 ARHGAP5Q13017 1502 aa42.5■■■■■ 4.39
PDCD2-209ENST00000542896 ATP10AO60312 1499 aa42.49■■■■■ 4.39
PDCD2-209ENST00000542896 C9orf84Q5VXU9 1444 aa42.46■■■■■ 4.39
PDCD2-209ENST00000542896 ZNF518AQ6AHZ1 1483 aa42.43■■■■■ 4.38
PDCD2-209ENST00000542896 LRRIQ1Q96JM4 1722 aa42.41■■■■■ 4.38
PDCD2-209ENST00000542896 CASKIN1Q8WXD9 1431 aa42.41■■■■■ 4.38
PDCD2-209ENST00000542896 AFAP1Q8N556 730 aa42.4■■■■■ 4.38
PDCD2-209ENST00000542896 MYT1LQ9UL68 1186 aa42.39■■■■■ 4.38
PDCD2-209ENST00000542896 CCDC18Q5T9S5 1454 aa42.38■■■■■ 4.38
PDCD2-209ENST00000542896 HSPA2P54652 639 aa42.38■■■■■ 4.37
PDCD2-209ENST00000542896 FBXO41Q8TF61 875 aa42.36■■■■■ 4.37
PDCD2-209ENST00000542896 FER1L4A9Z1Z3 1794 aa42.34■■■■■ 4.37
PDCD2-209ENST00000542896 ARHGEF12Q9NZN5 1544 aa42.32■■■■■ 4.37
PDCD2-209ENST00000542896 KDM5CP41229 1560 aa42.31■■■■■ 4.36
PDCD2-209ENST00000542896 CDC42BPBQ9Y5S2 1711 aa42.25■■■■■ 4.35
PDCD2-209ENST00000542896 PREX2Q70Z35 1606 aa42.22■■■■■ 4.35
PDCD2-209ENST00000542896 FYCO1Q9BQS8 1478 aa42.22■■■■■ 4.35
PDCD2-209ENST00000542896 MLH3Q9UHC1 1453 aa42.19■■■■■ 4.34
PDCD2-209ENST00000542896 CEBPAP49715 358 aaPredicted RBP42.19■■■■■ 4.34
PDCD2-209ENST00000542896 TRAPPC8Q9Y2L5 1435 aa42.19■■■■■ 4.34
PDCD2-209ENST00000542896 DIP2CQ9Y2E4 1556 aa42.18■■■■■ 4.34
PDCD2-209ENST00000542896 ABCC1P33527 1531 aa42.17■■■■■ 4.34
PDCD2-209ENST00000542896 REREQ9P2R6 1566 aa42.12■■■■■ 4.33
PDCD2-209ENST00000542896 ABCA6Q8N139 1617 aa42.1■■■■■ 4.33
PDCD2-209ENST00000542896 ZNF777Q9ULD5 760 aaPredicted RBP42.09■■■■■ 4.33
PDCD2-209ENST00000542896 ITSN2Q9NZM3 1697 aa42.08■■■■■ 4.33
PDCD2-209ENST00000542896 CDC42BPAQ5VT25 1732 aa42.04■■■■■ 4.32
PDCD2-209ENST00000542896 ESF1Q9H501 851 aaKnown RBP42.03■■■■■ 4.32
PDCD2-209ENST00000542896 PREX1Q8TCU6 1659 aa42.02■■■■■ 4.32
PDCD2-209ENST00000542896 AGLP35573 1532 aa42.01■■■■■ 4.32
PDCD2-209ENST00000542896 GPATCH8Q9UKJ3 1502 aaKnown RBP41.98■■■■■ 4.31
PDCD2-209ENST00000542896 UHRF1BP1Q6BDS2 1440 aa41.97■■■■■ 4.31
PDCD2-209ENST00000542896 KIDINS220Q9ULH0 1771 aa41.94■■■■■ 4.3
PDCD2-209ENST00000542896 SAMD9LQ8IVG5 1584 aa41.93■■■■■ 4.3
PDCD2-209ENST00000542896 HNRNPMP52272 730 aaKnown RBP eCLIP41.92■■■■■ 4.3
PDCD2-209ENST00000542896 SYCP2Q9BX26 1530 aa41.91■■■■■ 4.3
PDCD2-209ENST00000542896 CFDP1Q9UEE9 299 aaPredicted RBP41.91■■■■■ 4.3
PDCD2-209ENST00000542896 SPAG9O60271 1321 aaKnown RBP41.91■■■■■ 4.3
PDCD2-209ENST00000542896 CERKQ8TCT0 537 aa41.9■■■■■ 4.3
PDCD2-209ENST00000542896 CCNB3Q8WWL7 1395 aa41.89■■■■■ 4.3
PDCD2-209ENST00000542896 MTUS2Q5JR59 1369 aa41.88■■■■■ 4.3
PDCD2-209ENST00000542896 DMRT2Q9Y5R5 561 aa41.85■■■■■ 4.29
PDCD2-209ENST00000542896 CNTLNQ9NXG0 1405 aa41.84■■■■■ 4.29
PDCD2-209ENST00000542896 KIAA1107Q9UPP5 1409 aa41.83■■■■■ 4.29
PDCD2-209ENST00000542896 PLEKHH2Q8IVE3 1493 aa41.83■■■■■ 4.29
PDCD2-209ENST00000542896 C3P01024 1663 aa41.83■■■■■ 4.29
PDCD2-209ENST00000542896 SETD1BQ9UPS6 1966 aaKnown RBP41.81■■■■■ 4.28
PDCD2-209ENST00000542896 ATP7AQ04656 1500 aa41.74■■■■■ 4.27
PDCD2-209ENST00000542896 STRCQ7RTU9 1775 aa41.71■■■■■ 4.27
PDCD2-209ENST00000542896 A2MP01023 1474 aa41.67■■■■■ 4.26
PDCD2-209ENST00000542896 EHBP1L1Q8N3D4 1523 aa41.67■■■■■ 4.26
PDCD2-209ENST00000542896 INO80Q9ULG1 1556 aaPredicted RBP41.67■■■■■ 4.26
PDCD2-209ENST00000542896 CEP162Q5TB80 1403 aa41.66■■■■■ 4.26
PDCD2-209ENST00000542896 SUPT6HQ7KZ85 1726 aaKnown RBP41.66■■■■■ 4.26
PDCD2-209ENST00000542896 ZMYM3Q14202 1370 aa41.65■■■■■ 4.26
PDCD2-209ENST00000542896 ZNF644Q9H582 1327 aaPredicted RBP41.65■■■■■ 4.26
PDCD2-209ENST00000542896 TIAM1Q13009 1591 aa41.63■■■■■ 4.25
PDCD2-209ENST00000542896 NPATQ14207 1427 aa41.62■■■■■ 4.25
PDCD2-209ENST00000542896 PTPRTO14522 1441 aa41.61■■■■■ 4.25
PDCD2-209ENST00000542896 PLXNC1O60486 1568 aa41.6■■■■■ 4.25
PDCD2-209ENST00000542896 GGT6Q6P531 493 aa41.6■■■■■ 4.25
PDCD2-209ENST00000542896 MROH2AA6NES4 1674 aa41.6■■■■■ 4.25
PDCD2-209ENST00000542896 MBD5Q9P267 1494 aa41.53■■■■■ 4.24
PDCD2-209ENST00000542896 NCOA1Q15788 1441 aa41.53■■■■■ 4.24
PDCD2-209ENST00000542896 CLTCQ00610 1675 aaKnown RBP41.49■■■■■ 4.23
PDCD2-209ENST00000542896 PPP6R1Q9UPN7 881 aa41.48■■■■■ 4.23
PDCD2-209ENST00000542896 RTEL1-TNFRSF6BF6WH68 1400 aa41.47■■■■■ 4.23
PDCD2-209ENST00000542896 ADGBQ8N7X0 1667 aa41.46■■■■■ 4.23
PDCD2-209ENST00000542896 CAMSAP1Q5T5Y3 1602 aa41.44■■■■■ 4.22
PDCD2-209ENST00000542896 NCOA2Q15596 1464 aa41.43■■■■■ 4.22
PDCD2-209ENST00000542896 PTPRKQ15262 1439 aa41.42■■■■■ 4.22
PDCD2-209ENST00000542896 DHX29Q7Z478 1369 aaKnown RBP41.4■■■■■ 4.22
PDCD2-209ENST00000542896 CCDC141Q6ZP82 1450 aa41.37■■■■■ 4.21
PDCD2-209ENST00000542896 RSPH4AQ5TD94 716 aa41.36■■■■■ 4.21
PDCD2-209ENST00000542896 NCKAP5LQ9HCH0 1330 aa41.36■■■■■ 4.21
PDCD2-209ENST00000542896 CAMSAP2Q08AD1 1489 aa41.35■■■■■ 4.21
PDCD2-209ENST00000542896 LTBP4Q8N2S1 1624 aa41.33■■■■■ 4.21
PDCD2-209ENST00000542896 MYO3AQ8NEV4 1616 aa41.33■■■■■ 4.21
PDCD2-209ENST00000542896 KIF3BO15066 747 aa41.31■■■■■ 4.2
PDCD2-209ENST00000542896 CEP170BQ9Y4F5 1589 aaPredicted RBP41.29■■■■■ 4.2
PDCD2-209ENST00000542896 PKD2Q13563 968 aa41.28■■■■■ 4.2
PDCD2-209ENST00000542896 ZNF142P52746 1687 aaPredicted RBP41.28■■■■■ 4.2
PDCD2-209ENST00000542896 PLA2R1Q13018 1463 aa41.28■■■■■ 4.2
PDCD2-209ENST00000542896 VPS8Q8N3P4 1428 aa41.25■■■■■ 4.19
PDCD2-209ENST00000542896 LOC105371045A0A1W2PR82 267 aa41.24■■■■■ 4.19
PDCD2-209ENST00000542896 TSPY4P0CV99 314 aa41.22■■■■■ 4.19
PDCD2-209ENST00000542896 TSPY10P0CW01 314 aa41.22■■■■■ 4.19
PDCD2-209ENST00000542896 IQSEC2Q5JU85 1478 aa41.21■■■■■ 4.19
PDCD2-209ENST00000542896 TCOF1Q13428 1488 aaKnown RBP41.19■■■■■ 4.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms