RNA–Protein interactions for RNA: ENST00000542428.1

AC009509.3-201, humanhuman

BASIC

Gene AC009509.3, Length 314 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009509.3-201ENST00000542428 CROCC2H7BZ55 1655 aa16.45■□□□□ 0.22
AC009509.3-201ENST00000542428 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
AC009509.3-201ENST00000542428 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
AC009509.3-201ENST00000542428 KCNH8Q96L42 1107 aa16.44■□□□□ 0.22
AC009509.3-201ENST00000542428 GPATCH8Q9UKJ3 1502 aaKnown RBP16.42■□□□□ 0.22
AC009509.3-201ENST00000542428 KANK4Q5T7N3 995 aaPredicted RBP16.42■□□□□ 0.22
AC009509.3-201ENST00000542428 FANCAO15360 1455 aa16.42■□□□□ 0.22
AC009509.3-201ENST00000542428 PTPN23Q9H3S7 1636 aa16.41■□□□□ 0.22
AC009509.3-201ENST00000542428 NEO1Q92859 1461 aa16.4■□□□□ 0.22
AC009509.3-201ENST00000542428 PLCH2O75038 1416 aa16.39■□□□□ 0.21
AC009509.3-201ENST00000542428 APLP2Q06481 763 aa16.39■□□□□ 0.21
AC009509.3-201ENST00000542428 SYCP2Q9BX26 1530 aa16.39■□□□□ 0.21
AC009509.3-201ENST00000542428 CAMSAP2Q08AD1 1489 aa16.37■□□□□ 0.21
AC009509.3-201ENST00000542428 MYOM3Q5VTT5 1437 aa16.36■□□□□ 0.21
AC009509.3-201ENST00000542428 CCNB3Q8WWL7 1395 aa16.36■□□□□ 0.21
AC009509.3-201ENST00000542428 PHLDB1Q86UU1 1377 aa16.35■□□□□ 0.21
AC009509.3-201ENST00000542428 ADGRL1O94910 1474 aa16.35■□□□□ 0.21
AC009509.3-201ENST00000542428 KDM5CP41229 1560 aa16.34■□□□□ 0.21
AC009509.3-201ENST00000542428 ADGBQ8N7X0 1667 aa16.34■□□□□ 0.21
AC009509.3-201ENST00000542428 ZMYM4Q5VZL5 1548 aa16.33■□□□□ 0.2
AC009509.3-201ENST00000542428 HECW2Q9P2P5 1572 aa16.33■□□□□ 0.2
AC009509.3-201ENST00000542428 INO80Q9ULG1 1556 aaPredicted RBP16.33■□□□□ 0.2
AC009509.3-201ENST00000542428 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.2
AC009509.3-201ENST00000542428 ARHGEF5Q12774 1597 aa16.32■□□□□ 0.2
AC009509.3-201ENST00000542428 FGD6Q6ZV73 1430 aa16.31■□□□□ 0.2
AC009509.3-201ENST00000542428 AKNAQ7Z591 1439 aa16.31■□□□□ 0.2
AC009509.3-201ENST00000542428 ARHGEF12Q9NZN5 1544 aa16.3■□□□□ 0.2
AC009509.3-201ENST00000542428 TCOF1Q13428 1488 aaKnown RBP16.3■□□□□ 0.2
AC009509.3-201ENST00000542428 ARHGEF40Q8TER5 1519 aa16.29■□□□□ 0.2
AC009509.3-201ENST00000542428 POGZQ7Z3K3 1410 aa16.29■□□□□ 0.2
AC009509.3-201ENST00000542428 MIA2Q96PC5 1412 aa16.29■□□□□ 0.2
AC009509.3-201ENST00000542428 KIDINS220Q9ULH0 1771 aa16.29■□□□□ 0.2
AC009509.3-201ENST00000542428 ABCA6Q8N139 1617 aa16.29■□□□□ 0.2
AC009509.3-201ENST00000542428 COL17A1Q9UMD9 1497 aaPredicted RBP16.29■□□□□ 0.2
AC009509.3-201ENST00000542428 ZFYVE16Q7Z3T8 1539 aa16.28■□□□□ 0.2
AC009509.3-201ENST00000542428 PLEKHH2Q8IVE3 1493 aa16.28■□□□□ 0.2
AC009509.3-201ENST00000542428 PPARGC1BQ86YN6 1023 aaKnown RBP16.27■□□□□ 0.2
AC009509.3-201ENST00000542428 SIGLEC1Q9BZZ2 1709 aa16.26■□□□□ 0.19
AC009509.3-201ENST00000542428 MAST1Q9Y2H9 1570 aa16.26■□□□□ 0.19
AC009509.3-201ENST00000542428 DENND4BO75064 1496 aaPredicted RBP16.25■□□□□ 0.19
AC009509.3-201ENST00000542428 ZNF518AQ6AHZ1 1483 aa16.25■□□□□ 0.19
AC009509.3-201ENST00000542428 DIP2CQ9Y2E4 1556 aa16.24■□□□□ 0.19
AC009509.3-201ENST00000542428 CCDC141Q6ZP82 1450 aa16.23■□□□□ 0.19
AC009509.3-201ENST00000542428 PLXNC1O60486 1568 aa16.23■□□□□ 0.19
AC009509.3-201ENST00000542428 SCAPERQ9BY12 1400 aa16.23■□□□□ 0.19
AC009509.3-201ENST00000542428 ATP7AQ04656 1500 aa16.23■□□□□ 0.19
AC009509.3-201ENST00000542428 MBD5Q9P267 1494 aa16.22■□□□□ 0.19
AC009509.3-201ENST00000542428 RRBP1Q9P2E9 1410 aaKnown RBP16.21■□□□□ 0.19
AC009509.3-201ENST00000542428 KIAA1107Q9UPP5 1409 aa16.21■□□□□ 0.19
AC009509.3-201ENST00000542428 TRAPPC8Q9Y2L5 1435 aa16.21■□□□□ 0.19
AC009509.3-201ENST00000542428 CFDP1Q9UEE9 299 aaPredicted RBP16.21■□□□□ 0.19
AC009509.3-201ENST00000542428 EFCAB2Q5VUJ9 269 aa16.2■□□□□ 0.18
AC009509.3-201ENST00000542428 GCC2Q8IWJ2 1684 aa16.2■□□□□ 0.18
AC009509.3-201ENST00000542428 SHANK2Q9UPX8 1470 aa16.19■□□□□ 0.18
AC009509.3-201ENST00000542428 ZNF777Q9ULD5 760 aaPredicted RBP16.18■□□□□ 0.18
AC009509.3-201ENST00000542428 ZNF644Q9H582 1327 aaPredicted RBP16.18■□□□□ 0.18
AC009509.3-201ENST00000542428 DAPK1P53355 1430 aa16.16■□□□□ 0.18
AC009509.3-201ENST00000542428 REREQ9P2R6 1566 aa16.16■□□□□ 0.18
AC009509.3-201ENST00000542428 BCORL1Q5H9F3 1711 aa16.14■□□□□ 0.17
AC009509.3-201ENST00000542428 MLH3Q9UHC1 1453 aa16.14■□□□□ 0.17
AC009509.3-201ENST00000542428 YEATS2Q9ULM3 1422 aa16.13■□□□□ 0.17
AC009509.3-201ENST00000542428 MAGI2Q86UL8 1455 aa16.13■□□□□ 0.17
AC009509.3-201ENST00000542428 EIF2AK4Q9P2K8 1649 aaKnown RBP16.12■□□□□ 0.17
AC009509.3-201ENST00000542428 ABCC5O15440 1437 aa16.11■□□□□ 0.17
AC009509.3-201ENST00000542428 C9orf84Q5VXU9 1444 aa16.11■□□□□ 0.17
AC009509.3-201ENST00000542428 RAPGEF3O95398 923 aa16.11■□□□□ 0.17
AC009509.3-201ENST00000542428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.1■□□□□ 0.17
AC009509.3-201ENST00000542428 ADGRL2O95490 1459 aa16.1■□□□□ 0.17
AC009509.3-201ENST00000542428 HNRNPMP52272 730 aaKnown RBP eCLIP16.09■□□□□ 0.17
AC009509.3-201ENST00000542428 FER1L4A9Z1Z3 1794 aa16.08■□□□□ 0.17
AC009509.3-201ENST00000542428 DEPDC5O75140 1603 aa16.06■□□□□ 0.16
AC009509.3-201ENST00000542428 RNF17Q9BXT8 1623 aaKnown RBP16.06■□□□□ 0.16
AC009509.3-201ENST00000542428 RTEL1-TNFRSF6BF6WH68 1400 aa16.06■□□□□ 0.16
AC009509.3-201ENST00000542428 PTPRKQ15262 1439 aa16.06■□□□□ 0.16
AC009509.3-201ENST00000542428 AFAP1Q8N556 730 aa16.05■□□□□ 0.16
AC009509.3-201ENST00000542428 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
AC009509.3-201ENST00000542428 CEP152O94986 1710 aa16.04■□□□□ 0.16
AC009509.3-201ENST00000542428 MROH1Q8NDA8 1641 aa16.04■□□□□ 0.16
AC009509.3-201ENST00000542428 DUOX2Q9NRD8 1548 aa16.03■□□□□ 0.16
AC009509.3-201ENST00000542428 SPAG9O60271 1321 aaKnown RBP16.02■□□□□ 0.16
AC009509.3-201ENST00000542428 UNC13BO14795 1591 aa16.02■□□□□ 0.16
AC009509.3-201ENST00000542428 AGLP35573 1532 aa16.02■□□□□ 0.15
AC009509.3-201ENST00000542428 A2MP01023 1474 aa16.02■□□□□ 0.15
AC009509.3-201ENST00000542428 ZC3H13Q5T200 1668 aaKnown RBP16.02■□□□□ 0.15
AC009509.3-201ENST00000542428 MADDQ8WXG6 1647 aa16.01■□□□□ 0.15
AC009509.3-201ENST00000542428 ATP10AO60312 1499 aa16.01■□□□□ 0.15
AC009509.3-201ENST00000542428 ADAMTSL3P82987 1691 aa16.01■□□□□ 0.15
AC009509.3-201ENST00000542428 RIMS1Q86UR5 1692 aaKnown RBP16■□□□□ 0.15
AC009509.3-201ENST00000542428 CLTCQ00610 1675 aaKnown RBP15.99■□□□□ 0.15
AC009509.3-201ENST00000542428 PRDM15P57071 1507 aaPredicted RBP15.99■□□□□ 0.15
AC009509.3-201ENST00000542428 MROH2AA6NES4 1674 aa15.98■□□□□ 0.15
AC009509.3-201ENST00000542428 RSPH4AQ5TD94 716 aa15.97■□□□□ 0.15
AC009509.3-201ENST00000542428 KIF15Q9NS87 1388 aa15.97■□□□□ 0.15
AC009509.3-201ENST00000542428 ERBINQ96RT1 1412 aa15.96■□□□□ 0.15
AC009509.3-201ENST00000542428 NCOA1Q15788 1441 aa15.95■□□□□ 0.14
AC009509.3-201ENST00000542428 CAMSAP1Q5T5Y3 1602 aa15.95■□□□□ 0.14
AC009509.3-201ENST00000542428 ROCK1Q13464 1354 aa15.95■□□□□ 0.14
AC009509.3-201ENST00000542428 ANKRD30AQ9BXX3 1397 aa15.95■□□□□ 0.14
AC009509.3-201ENST00000542428 MYT1LQ9UL68 1186 aa15.94■□□□□ 0.14
AC009509.3-201ENST00000542428 C3P01024 1663 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms