RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 KDM4FA0A1W2PPD8 638 aa31.86■■■□□ 2.69
CACNA2D4-215ENST00000542340 RICTORQ6R327 1708 aa31.85■■■□□ 2.69
CACNA2D4-215ENST00000542340 PREX2Q70Z35 1606 aa31.84■■■□□ 2.69
CACNA2D4-215ENST00000542340 CDC42BPBQ9Y5S2 1711 aa31.83■■■□□ 2.69
CACNA2D4-215ENST00000542340 EHBP1L1Q8N3D4 1523 aa31.81■■■□□ 2.68
CACNA2D4-215ENST00000542340 POGZQ7Z3K3 1410 aa31.81■■■□□ 2.68
CACNA2D4-215ENST00000542340 GPATCH8Q9UKJ3 1502 aaKnown RBP31.8■■■□□ 2.68
CACNA2D4-215ENST00000542340 CDC42BPAQ5VT25 1732 aa31.78■■■□□ 2.68
CACNA2D4-215ENST00000542340 ZMYM4Q5VZL5 1548 aa31.78■■■□□ 2.68
CACNA2D4-215ENST00000542340 TIAM1Q13009 1591 aa31.77■■■□□ 2.68
CACNA2D4-215ENST00000542340 CCNB3Q8WWL7 1395 aa31.77■■■□□ 2.68
CACNA2D4-215ENST00000542340 MAGI2Q86UL8 1455 aa31.75■■■□□ 2.67
CACNA2D4-215ENST00000542340 MAP3K1Q13233 1512 aa31.73■■■□□ 2.67
CACNA2D4-215ENST00000542340 ZNF518AQ6AHZ1 1483 aa31.72■■■□□ 2.67
CACNA2D4-215ENST00000542340 CFDP1Q9UEE9 299 aaPredicted RBP31.71■■■□□ 2.67
CACNA2D4-215ENST00000542340 ARHGEF40Q8TER5 1519 aa31.7■■■□□ 2.66
CACNA2D4-215ENST00000542340 AFAP1Q8N556 730 aa31.69■■■□□ 2.66
CACNA2D4-215ENST00000542340 ABCC1P33527 1531 aa31.69■■■□□ 2.66
CACNA2D4-215ENST00000542340 ZNF777Q9ULD5 760 aaPredicted RBP31.68■■■□□ 2.66
CACNA2D4-215ENST00000542340 ZFYVE16Q7Z3T8 1539 aa31.68■■■□□ 2.66
CACNA2D4-215ENST00000542340 LRRC9Q6ZRR7 1453 aa31.66■■■□□ 2.66
CACNA2D4-215ENST00000542340 ARHGEF12Q9NZN5 1544 aa31.66■■■□□ 2.66
CACNA2D4-215ENST00000542340 YEATS2Q9ULM3 1422 aa31.66■■■□□ 2.66
CACNA2D4-215ENST00000542340 NCOA2Q15596 1464 aa31.64■■■□□ 2.66
CACNA2D4-215ENST00000542340 KDM5CP41229 1560 aa31.64■■■□□ 2.65
CACNA2D4-215ENST00000542340 SUPT6HQ7KZ85 1726 aaKnown RBP31.63■■■□□ 2.65
CACNA2D4-215ENST00000542340 SAMD9LQ8IVG5 1584 aa31.63■■■□□ 2.65
CACNA2D4-215ENST00000542340 TRAPPC8Q9Y2L5 1435 aa31.62■■■□□ 2.65
CACNA2D4-215ENST00000542340 APLP2Q06481 763 aa31.61■■■□□ 2.65
CACNA2D4-215ENST00000542340 KANK4Q5T7N3 995 aaPredicted RBP31.61■■■□□ 2.65
CACNA2D4-215ENST00000542340 PLEKHH2Q8IVE3 1493 aa31.6■■■□□ 2.65
CACNA2D4-215ENST00000542340 KIAA1107Q9UPP5 1409 aa31.6■■■□□ 2.65
CACNA2D4-215ENST00000542340 ITSN2Q9NZM3 1697 aa31.6■■■□□ 2.65
CACNA2D4-215ENST00000542340 ARID4BQ4LE39 1312 aaPredicted RBP31.59■■■□□ 2.65
CACNA2D4-215ENST00000542340 MLH3Q9UHC1 1453 aa31.57■■■□□ 2.64
CACNA2D4-215ENST00000542340 HNRNPMP52272 730 aaKnown RBP eCLIP31.56■■■□□ 2.64
CACNA2D4-215ENST00000542340 ATP10AO60312 1499 aa31.56■■■□□ 2.64
CACNA2D4-215ENST00000542340 SYCP2Q9BX26 1530 aa31.55■■■□□ 2.64
CACNA2D4-215ENST00000542340 MYT1LQ9UL68 1186 aa31.55■■■□□ 2.64
CACNA2D4-215ENST00000542340 HECW2Q9P2P5 1572 aa31.54■■■□□ 2.64
CACNA2D4-215ENST00000542340 ZNF644Q9H582 1327 aaPredicted RBP31.52■■■□□ 2.64
CACNA2D4-215ENST00000542340 C9orf84Q5VXU9 1444 aa31.5■■■□□ 2.63
CACNA2D4-215ENST00000542340 BCORL1Q5H9F3 1711 aa31.48■■■□□ 2.63
CACNA2D4-215ENST00000542340 ADAMTSL3P82987 1691 aa31.47■■■□□ 2.63
CACNA2D4-215ENST00000542340 SPAG9O60271 1321 aaKnown RBP31.46■■■□□ 2.63
CACNA2D4-215ENST00000542340 DIP2CQ9Y2E4 1556 aa31.45■■■□□ 2.63
CACNA2D4-215ENST00000542340 MBD5Q9P267 1494 aa31.44■■■□□ 2.62
CACNA2D4-215ENST00000542340 SIGLEC1Q9BZZ2 1709 aa31.44■■■□□ 2.62
CACNA2D4-215ENST00000542340 KIDINS220Q9ULH0 1771 aa31.42■■■□□ 2.62
CACNA2D4-215ENST00000542340 ABCA6Q8N139 1617 aa31.42■■■□□ 2.62
CACNA2D4-215ENST00000542340 REREQ9P2R6 1566 aa31.4■■■□□ 2.62
CACNA2D4-215ENST00000542340 CAMSAP2Q08AD1 1489 aa31.4■■■□□ 2.62
CACNA2D4-215ENST00000542340 RSPH4AQ5TD94 716 aa31.39■■■□□ 2.62
CACNA2D4-215ENST00000542340 MYOM3Q5VTT5 1437 aa31.39■■■□□ 2.62
CACNA2D4-215ENST00000542340 MIA2Q96PC5 1412 aa31.37■■■□□ 2.61
CACNA2D4-215ENST00000542340 ATP7AQ04656 1500 aa31.35■■■□□ 2.61
CACNA2D4-215ENST00000542340 MLECQ14165 292 aa31.35■■■□□ 2.61
CACNA2D4-215ENST00000542340 MADDQ8WXG6 1647 aa31.35■■■□□ 2.61
CACNA2D4-215ENST00000542340 PTPRMP28827 1452 aa31.34■■■□□ 2.61
CACNA2D4-215ENST00000542340 INO80Q9ULG1 1556 aaPredicted RBP31.34■■■□□ 2.61
CACNA2D4-215ENST00000542340 AGLP35573 1532 aa31.32■■■□□ 2.6
CACNA2D4-215ENST00000542340 CCDC141Q6ZP82 1450 aa31.32■■■□□ 2.6
CACNA2D4-215ENST00000542340 RTEL1-TNFRSF6BF6WH68 1400 aa31.31■■■□□ 2.6
CACNA2D4-215ENST00000542340 ARHGEF5Q12774 1597 aa31.27■■■□□ 2.6
CACNA2D4-215ENST00000542340 TSPY4P0CV99 314 aa31.24■■■□□ 2.59
CACNA2D4-215ENST00000542340 TSPY10P0CW01 314 aa31.24■■■□□ 2.59
CACNA2D4-215ENST00000542340 RIMS1Q86UR5 1692 aaKnown RBP31.24■■■□□ 2.59
CACNA2D4-215ENST00000542340 A2MP01023 1474 aa31.23■■■□□ 2.59
CACNA2D4-215ENST00000542340 FER1L4A9Z1Z3 1794 aa31.2■■■□□ 2.58
CACNA2D4-215ENST00000542340 PLXNC1O60486 1568 aa31.18■■■□□ 2.58
CACNA2D4-215ENST00000542340 FGD6Q6ZV73 1430 aa31.18■■■□□ 2.58
CACNA2D4-215ENST00000542340 ADGBQ8N7X0 1667 aa31.17■■■□□ 2.58
CACNA2D4-215ENST00000542340 PTPN23Q9H3S7 1636 aa31.15■■■□□ 2.58
CACNA2D4-215ENST00000542340 DHX29Q7Z478 1369 aaKnown RBP31.15■■■□□ 2.58
CACNA2D4-215ENST00000542340 TCOF1Q13428 1488 aaKnown RBP31.12■■■□□ 2.57
CACNA2D4-215ENST00000542340 ESF1Q9H501 851 aaKnown RBP31.11■■■□□ 2.57
CACNA2D4-215ENST00000542340 MAST1Q9Y2H9 1570 aa31.1■■■□□ 2.57
CACNA2D4-215ENST00000542340 PLPPR3Q6T4P5 718 aa31.08■■■□□ 2.57
CACNA2D4-215ENST00000542340 ABCC5O15440 1437 aa31.06■■■□□ 2.56
CACNA2D4-215ENST00000542340 CNTLNQ9NXG0 1405 aa31.06■■■□□ 2.56
CACNA2D4-215ENST00000542340 GGT6Q6P531 493 aa31.04■■■□□ 2.56
CACNA2D4-215ENST00000542340 PPP6R1Q9UPN7 881 aa31.04■■■□□ 2.56
CACNA2D4-215ENST00000542340 CEBPAP49715 358 aaPredicted RBP31.03■■■□□ 2.56
CACNA2D4-215ENST00000542340 SHANK2Q9UPX8 1470 aa31.01■■■□□ 2.56
CACNA2D4-215ENST00000542340 DAPK1P53355 1430 aa31.01■■■□□ 2.55
CACNA2D4-215ENST00000542340 KIF3BO15066 747 aa31■■■□□ 2.55
CACNA2D4-215ENST00000542340 DNMT1P26358 1616 aaKnown RBP30.99■■■□□ 2.55
CACNA2D4-215ENST00000542340 FAM50AQ14320 339 aaKnown RBP30.96■■■□□ 2.55
CACNA2D4-215ENST00000542340 PPARGC1BQ86YN6 1023 aaKnown RBP30.96■■■□□ 2.55
CACNA2D4-215ENST00000542340 CROCC2H7BZ55 1655 aa30.96■■■□□ 2.55
CACNA2D4-215ENST00000542340 LMTK3Q96Q04 1460 aa30.94■■■□□ 2.54
CACNA2D4-215ENST00000542340 ZMYM3Q14202 1370 aa30.93■■■□□ 2.54
CACNA2D4-215ENST00000542340 C3P01024 1663 aa30.93■■■□□ 2.54
CACNA2D4-215ENST00000542340 MROH2AA6NES4 1674 aa30.92■■■□□ 2.54
CACNA2D4-215ENST00000542340 DUOX2Q9NRD8 1548 aa30.9■■■□□ 2.54
CACNA2D4-215ENST00000542340 KIF15Q9NS87 1388 aa30.9■■■□□ 2.54
CACNA2D4-215ENST00000542340 RRP7BPQ9NSQ0 103 aa30.89■■■□□ 2.54
CACNA2D4-215ENST00000542340 CLTCQ00610 1675 aaKnown RBP30.88■■■□□ 2.53
CACNA2D4-215ENST00000542340 CHIC2Q9UKJ5 165 aa30.88■■■□□ 2.53
CACNA2D4-215ENST00000542340 ANKRD30AQ9BXX3 1397 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms