RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-206ENST00000541836 KIF7Q2M1P5 1343 aa18.5■□□□□ 0.55
NPIPA1-206ENST00000541836 MPHOSPH9Q99550 1183 aa18.49■□□□□ 0.55
NPIPA1-206ENST00000541836 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
NPIPA1-206ENST00000541836 NBPF8Q3BBV2 869 aa18.47■□□□□ 0.55
NPIPA1-206ENST00000541836 HECW1Q76N89 1606 aa18.47■□□□□ 0.55
NPIPA1-206ENST00000541836 RNF123Q5XPI4 1314 aa18.46■□□□□ 0.54
NPIPA1-206ENST00000541836 SUPT6HQ7KZ85 1726 aaKnown RBP18.45■□□□□ 0.54
NPIPA1-206ENST00000541836 CTTNBP2Q8WZ74 1663 aa18.45■□□□□ 0.54
NPIPA1-206ENST00000541836 IL27Q8NEV9 243 aa18.44■□□□□ 0.54
NPIPA1-206ENST00000541836 SALL2Q9Y467 1007 aaPredicted RBP18.43■□□□□ 0.54
NPIPA1-206ENST00000541836 CUL7Q14999 1698 aa18.43■□□□□ 0.54
NPIPA1-206ENST00000541836 KIF21AQ7Z4S6 1674 aa18.43■□□□□ 0.54
NPIPA1-206ENST00000541836 NPM2Q86SE8 214 aaKnown RBP18.43■□□□□ 0.54
NPIPA1-206ENST00000541836 KDM6BO15054 1643 aa18.43■□□□□ 0.54
NPIPA1-206ENST00000541836 LRRIQ1Q96JM4 1722 aa18.43■□□□□ 0.54
NPIPA1-206ENST00000541836 GAPVD1Q14C86 1478 aa18.42■□□□□ 0.54
NPIPA1-206ENST00000541836 POLR3GLQ9BT43 218 aa18.41■□□□□ 0.54
NPIPA1-206ENST00000541836 GCC2Q8IWJ2 1684 aa18.41■□□□□ 0.54
NPIPA1-206ENST00000541836 EHBP1L1Q8N3D4 1523 aa18.41■□□□□ 0.54
NPIPA1-206ENST00000541836 RTN4Q9NQC3 1192 aaKnown RBP18.4■□□□□ 0.54
NPIPA1-206ENST00000541836 SPATA31E1Q6ZUB1 1445 aa18.39■□□□□ 0.53
NPIPA1-206ENST00000541836 GRIN2BQ13224 1484 aa18.39■□□□□ 0.53
NPIPA1-206ENST00000541836 UGGT2Q9NYU1 1516 aa18.39■□□□□ 0.53
NPIPA1-206ENST00000541836 LAS1LQ9Y4W2 734 aaKnown RBP18.36■□□□□ 0.53
NPIPA1-206ENST00000541836 ABCA5Q8WWZ7 1642 aa18.36■□□□□ 0.53
NPIPA1-206ENST00000541836 RPRD2Q5VT52 1461 aaKnown RBP18.35■□□□□ 0.53
NPIPA1-206ENST00000541836 DHX29Q7Z478 1369 aaKnown RBP18.35■□□□□ 0.53
NPIPA1-206ENST00000541836 NEFMP07197 916 aa18.35■□□□□ 0.53
NPIPA1-206ENST00000541836 ANKRD30BQ9BXX2 1392 aa18.35■□□□□ 0.53
NPIPA1-206ENST00000541836 TEX14Q8IWB6 1497 aa18.34■□□□□ 0.53
NPIPA1-206ENST00000541836 MAGI3Q5TCQ9 1506 aa18.34■□□□□ 0.53
NPIPA1-206ENST00000541836 TCOF1Q13428 1488 aaKnown RBP18.34■□□□□ 0.53
NPIPA1-206ENST00000541836 ARHGEF11O15085 1522 aa18.33■□□□□ 0.53
NPIPA1-206ENST00000541836 SAMD9Q5K651 1589 aa18.32■□□□□ 0.52
NPIPA1-206ENST00000541836 POLR1AO95602 1720 aaPredicted RBP18.32■□□□□ 0.52
NPIPA1-206ENST00000541836 THOC2Q8NI27 1593 aaKnown RBP18.32■□□□□ 0.52
NPIPA1-206ENST00000541836 TMC1Q8TDI8 760 aa18.31■□□□□ 0.52
NPIPA1-206ENST00000541836 PNISRQ8TF01 805 aaKnown RBP18.31■□□□□ 0.52
NPIPA1-206ENST00000541836 ARID3CA6NKF2 412 aa18.3■□□□□ 0.52
NPIPA1-206ENST00000541836 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
NPIPA1-206ENST00000541836 TCERG1O14776 1098 aaKnown RBP18.29■□□□□ 0.52
NPIPA1-206ENST00000541836 PDE4AP27815 886 aa18.29■□□□□ 0.52
NPIPA1-206ENST00000541836 EXOC6Q8TAG9 804 aa18.29■□□□□ 0.52
NPIPA1-206ENST00000541836 ZNF326Q5BKZ1 582 aaKnown RBP18.28■□□□□ 0.52
NPIPA1-206ENST00000541836 USP35Q9P2H5 1018 aa18.28■□□□□ 0.52
NPIPA1-206ENST00000541836 MIA2Q96PC5 1412 aa18.27■□□□□ 0.52
NPIPA1-206ENST00000541836 RRP1P56182 461 aaKnown RBP18.27■□□□□ 0.51
NPIPA1-206ENST00000541836 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
NPIPA1-206ENST00000541836 TARBP1Q13395 1621 aaKnown RBP18.25■□□□□ 0.51
NPIPA1-206ENST00000541836 USP47Q96K76 1375 aa18.25■□□□□ 0.51
NPIPA1-206ENST00000541836 BACH2Q9BYV9 841 aa18.24■□□□□ 0.51
NPIPA1-206ENST00000541836 ERCC6Q03468 1493 aa18.24■□□□□ 0.51
NPIPA1-206ENST00000541836 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.23■□□□□ 0.51
NPIPA1-206ENST00000541836 PPM1GO15355 546 aaPredicted RBP18.22■□□□□ 0.51
NPIPA1-206ENST00000541836 BCORL1Q5H9F3 1711 aa18.22■□□□□ 0.51
NPIPA1-206ENST00000541836 RCAN3Q9UKA8 241 aa18.21■□□□□ 0.51
NPIPA1-206ENST00000541836 WDR62O43379 1518 aa18.21■□□□□ 0.51
NPIPA1-206ENST00000541836 WASHC2CQ9Y4E1 1318 aa18.19■□□□□ 0.5
NPIPA1-206ENST00000541836 MS4A1P11836 297 aa18.18■□□□□ 0.5
NPIPA1-206ENST00000541836 ZNF608Q9ULD9 1512 aaPredicted RBP18.17■□□□□ 0.5
NPIPA1-206ENST00000541836 DAPK1P53355 1430 aa18.17■□□□□ 0.5
NPIPA1-206ENST00000541836 EPRSP07814 1512 aaKnown RBP18.17■□□□□ 0.5
NPIPA1-206ENST00000541836 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
NPIPA1-206ENST00000541836 ROCK1Q13464 1354 aa18.17■□□□□ 0.5
NPIPA1-206ENST00000541836 CDK13Q14004 1512 aaKnown RBP18.16■□□□□ 0.5
NPIPA1-206ENST00000541836 ARID4BQ4LE39 1312 aaPredicted RBP18.16■□□□□ 0.5
NPIPA1-206ENST00000541836 BRPF3Q9ULD4 1205 aa18.14■□□□□ 0.5
NPIPA1-206ENST00000541836 ZNF644Q9H582 1327 aaPredicted RBP18.14■□□□□ 0.49
NPIPA1-206ENST00000541836 KIF15Q9NS87 1388 aa18.14■□□□□ 0.49
NPIPA1-206ENST00000541836 ROCK2O75116 1388 aaKnown RBP18.14■□□□□ 0.49
NPIPA1-206ENST00000541836 PBRM1Q86U86 1689 aa18.13■□□□□ 0.49
NPIPA1-206ENST00000541836 ABCC5O15440 1437 aa18.13■□□□□ 0.49
NPIPA1-206ENST00000541836 BRD4O60885 1362 aaPredicted RBP18.13■□□□□ 0.49
NPIPA1-206ENST00000541836 MYBBP1AQ9BQG0 1328 aaKnown RBP18.13■□□□□ 0.49
NPIPA1-206ENST00000541836 SKAP1Q86WV1 359 aa18.13■□□□□ 0.49
NPIPA1-206ENST00000541836 MBD5Q9P267 1494 aa18.12■□□□□ 0.49
NPIPA1-206ENST00000541836 FBLN2P98095 1184 aa18.12■□□□□ 0.49
NPIPA1-206ENST00000541836 GSE1Q14687 1217 aa18.11■□□□□ 0.49
NPIPA1-206ENST00000541836 DDRGK1Q96HY6 314 aa18.11■□□□□ 0.49
NPIPA1-206ENST00000541836 KDM5CP41229 1560 aa18.1■□□□□ 0.49
NPIPA1-206ENST00000541836 PZPP20742 1482 aa18.09■□□□□ 0.49
NPIPA1-206ENST00000541836 IFT140Q96RY7 1462 aa18.09■□□□□ 0.49
NPIPA1-206ENST00000541836 PLIN1O60240 522 aa18.09■□□□□ 0.49
NPIPA1-206ENST00000541836 RALBP1Q15311 655 aa18.09■□□□□ 0.49
NPIPA1-206ENST00000541836 CARD11Q9BXL7 1154 aa18.09■□□□□ 0.49
NPIPA1-206ENST00000541836 IQGAP2Q13576 1575 aa18.09■□□□□ 0.49
NPIPA1-206ENST00000541836 NFKBIBQ15653 356 aa18.07■□□□□ 0.48
NPIPA1-206ENST00000541836 CDCA7LQ96GN5 454 aa18.07■□□□□ 0.48
NPIPA1-206ENST00000541836 SLC4A3P48751 1232 aa18.07■□□□□ 0.48
NPIPA1-206ENST00000541836 DNMT1P26358 1616 aaKnown RBP18.07■□□□□ 0.48
NPIPA1-206ENST00000541836 KIF14Q15058 1648 aa18.07■□□□□ 0.48
NPIPA1-206ENST00000541836 ADAMTS12P58397 1594 aa18.07■□□□□ 0.48
NPIPA1-206ENST00000541836 PDE3BQ13370 1112 aa18.06■□□□□ 0.48
NPIPA1-206ENST00000541836 PKD2Q13563 968 aa18.06■□□□□ 0.48
NPIPA1-206ENST00000541836 KIAA1107Q9UPP5 1409 aa18.05■□□□□ 0.48
NPIPA1-206ENST00000541836 ST20-MTHFSA0A0A6YYL1 179 aa18.05■□□□□ 0.48
NPIPA1-206ENST00000541836 CHMP7Q8WUX9 453 aaPredicted RBP18.04■□□□□ 0.48
NPIPA1-206ENST00000541836 CRBNQ96SW2 442 aa18.04■□□□□ 0.48
NPIPA1-206ENST00000541836 DAXXQ9UER7 740 aaPredicted RBP18.04■□□□□ 0.48
NPIPA1-206ENST00000541836 KTN1Q86UP2 1357 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms