RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-206ENST00000541836 ILF3Q12906 894 aaKnown RBP eCLIP12.55□□□□□ -0.41e-28■■■■■ 92.7
NPIPA1-206ENST00000541836 RBFOX2O43251 390 aaKnown RBP eCLIP11.56□□□□□ -0.566e-23■■■■■ 39.7
NPIPA1-206ENST00000541836 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.51□□□□□ -0.257e-19■■■■■ 168.9
NPIPA1-206ENST00000541836 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.95□□□□□ -0.026e-13■□□□□ 10.4
NPIPA1-206ENST00000541836 GTF2F1P35269 517 aaKnown RBP eCLIP16.57■□□□□ 0.241e-12■■■■■ 90.4
NPIPA1-206ENST00000541836 PCBP1Q15365 356 aaKnown RBP eCLIP13.33□□□□□ -0.281e-12■■■■■ 65.4
NPIPA1-206ENST00000541836 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.09□□□□□ -0.313e-12■■■■■ 43.9
NPIPA1-206ENST00000541836 EIF3DO15371 548 aaKnown RBP eCLIP14.57□□□□□ -0.081e-11■□□□□ 8.9
NPIPA1-206ENST00000541836 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.59□□□□□ -0.073e-10■■■■■ 153.8
NPIPA1-206ENST00000541836 ZRANB2O95218 330 aaKnown RBP eCLIP15.94■□□□□ 0.148e-10■■■■■ 54.6
NPIPA1-206ENST00000541836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.57■□□□□ 0.44e-9■■□□□ 12.3
NPIPA1-206ENST00000541836 ZNF622Q969S3 477 aaKnown RBP eCLIP15.07■□□□□ 08e-9■□□□□ 9.9
NPIPA1-206ENST00000541836 U2AF2P26368 475 aaKnown RBP eCLIP16.47■□□□□ 0.233e-8■■□□□ 11.5
NPIPA1-206ENST00000541836 HNRNPKP61978 463 aaKnown RBP eCLIP11.63□□□□□ -0.553e-8■■■■■ 54.9
NPIPA1-206ENST00000541836 PCBP2Q15366 365 aaKnown RBP eCLIP13.31□□□□□ -0.284e-8■■■■■ 149.6
NPIPA1-206ENST00000541836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.81■□□□□ 0.64e-8■■■■□ 26
NPIPA1-206ENST00000541836 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.03□□□□□ -0.89e-8■■□□□ 13.4
NPIPA1-206ENST00000541836 PPIGQ13427 754 aaKnown RBP eCLIP13.23□□□□□ -0.293e-7■■■□□ 14.6
NPIPA1-206ENST00000541836 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.585e-7■■■■□ 22.4
NPIPA1-206ENST00000541836 EFTUD2Q15029 972 aaKnown RBP eCLIP14.43□□□□□ -0.18e-7■□□□□ 11.3
NPIPA1-206ENST00000541836 U2AF1Q01081 240 aaKnown RBP eCLIP17.11■□□□□ 0.339e-7■□□□□ 9.2
NPIPA1-206ENST00000541836 PTBP1P26599 531 aaKnown RBP eCLIP12.96□□□□□ -0.331e-6■■■■□ 22.6
NPIPA1-206ENST00000541836 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.99■□□□□ 0.152e-6■□□□□ 10.8
NPIPA1-206ENST00000541836 FXR2P51116 673 aaKnown RBP eCLIP14.87□□□□□ -0.032e-6■■■■■ 30.9
NPIPA1-206ENST00000541836 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.852e-6■□□□□ 9.6
NPIPA1-206ENST00000541836 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.44■□□□□ 0.063e-6■■■■□ 22
NPIPA1-206ENST00000541836 RBM15Q96T37 977 aaKnown RBP eCLIP14.54□□□□□ -0.084e-6■■□□□ 13.1
NPIPA1-206ENST00000541836 SF3B4Q15427 424 aaKnown RBP eCLIP13.66□□□□□ -0.226e-6■□□□□ 8.6
NPIPA1-206ENST00000541836 METAP2P50579 478 aaKnown RBP eCLIP15.59■□□□□ 0.098e-6■■□□□ 13.7
NPIPA1-206ENST00000541836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.3■□□□□ 0.361e-5■■■■□ 25.8
Retrieved 30 of 30 RNA–protein pairs in 549 ms