RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 ITSN2Q9NZM3 1697 aa30.55■■■□□ 2.48
DDX55-207ENST00000540763 APLP2Q06481 763 aa30.54■■■□□ 2.48
DDX55-207ENST00000540763 ARHGAP5Q13017 1502 aa30.51■■■□□ 2.47
DDX55-207ENST00000540763 NCOA2Q15596 1464 aa30.49■■■□□ 2.47
DDX55-207ENST00000540763 GPATCH8Q9UKJ3 1502 aaKnown RBP30.48■■■□□ 2.47
DDX55-207ENST00000540763 AKNAQ7Z591 1439 aa30.47■■■□□ 2.47
DDX55-207ENST00000540763 CCNB3Q8WWL7 1395 aa30.46■■■□□ 2.47
DDX55-207ENST00000540763 COL17A1Q9UMD9 1497 aaPredicted RBP30.45■■■□□ 2.47
DDX55-207ENST00000540763 EFCAB2Q5VUJ9 269 aa30.43■■■□□ 2.46
DDX55-207ENST00000540763 KANK4Q5T7N3 995 aaPredicted RBP30.42■■■□□ 2.46
DDX55-207ENST00000540763 RICTORQ6R327 1708 aa30.41■■■□□ 2.46
DDX55-207ENST00000540763 ADGRL1O94910 1474 aa30.4■■■□□ 2.46
DDX55-207ENST00000540763 FRMPD1Q5SYB0 1578 aa30.38■■■□□ 2.45
DDX55-207ENST00000540763 ABCC1P33527 1531 aa30.37■■■□□ 2.45
DDX55-207ENST00000540763 DENND4BO75064 1496 aaPredicted RBP30.37■■■□□ 2.45
DDX55-207ENST00000540763 SAMD9LQ8IVG5 1584 aa30.37■■■□□ 2.45
DDX55-207ENST00000540763 PLEKHH2Q8IVE3 1493 aa30.32■■■□□ 2.44
DDX55-207ENST00000540763 SCAPERQ9BY12 1400 aa30.31■■■□□ 2.44
DDX55-207ENST00000540763 ZMYM4Q5VZL5 1548 aa30.31■■■□□ 2.44
DDX55-207ENST00000540763 POGZQ7Z3K3 1410 aa30.3■■■□□ 2.44
DDX55-207ENST00000540763 CFDP1Q9UEE9 299 aaPredicted RBP30.3■■■□□ 2.44
DDX55-207ENST00000540763 MYOM3Q5VTT5 1437 aa30.29■■■□□ 2.44
DDX55-207ENST00000540763 ZNF518AQ6AHZ1 1483 aa30.27■■■□□ 2.44
DDX55-207ENST00000540763 KIAA1107Q9UPP5 1409 aa30.27■■■□□ 2.44
DDX55-207ENST00000540763 KDM5CP41229 1560 aa30.26■■■□□ 2.43
DDX55-207ENST00000540763 MIA2Q96PC5 1412 aa30.26■■■□□ 2.43
DDX55-207ENST00000540763 SYCP2Q9BX26 1530 aa30.24■■■□□ 2.43
DDX55-207ENST00000540763 ARHGEF12Q9NZN5 1544 aa30.22■■■□□ 2.43
DDX55-207ENST00000540763 CAMSAP2Q08AD1 1489 aa30.21■■■□□ 2.43
DDX55-207ENST00000540763 MAGI2Q86UL8 1455 aa30.21■■■□□ 2.43
DDX55-207ENST00000540763 RAPGEF3O95398 923 aa30.21■■■□□ 2.43
DDX55-207ENST00000540763 ZNF777Q9ULD5 760 aaPredicted RBP30.18■■■□□ 2.42
DDX55-207ENST00000540763 ARHGEF40Q8TER5 1519 aa30.17■■■□□ 2.42
DDX55-207ENST00000540763 HECW2Q9P2P5 1572 aa30.17■■■□□ 2.42
DDX55-207ENST00000540763 ARHGEF5Q12774 1597 aa30.15■■■□□ 2.42
DDX55-207ENST00000540763 PTPN23Q9H3S7 1636 aa30.14■■■□□ 2.42
DDX55-207ENST00000540763 TRAPPC8Q9Y2L5 1435 aa30.14■■■□□ 2.42
DDX55-207ENST00000540763 FGD6Q6ZV73 1430 aa30.13■■■□□ 2.41
DDX55-207ENST00000540763 MBD5Q9P267 1494 aa30.13■■■□□ 2.41
DDX55-207ENST00000540763 ZFYVE16Q7Z3T8 1539 aa30.13■■■□□ 2.41
DDX55-207ENST00000540763 MLH3Q9UHC1 1453 aa30.12■■■□□ 2.41
DDX55-207ENST00000540763 TCOF1Q13428 1488 aaKnown RBP30.11■■■□□ 2.41
DDX55-207ENST00000540763 ZNF644Q9H582 1327 aaPredicted RBP30.1■■■□□ 2.41
DDX55-207ENST00000540763 INO80Q9ULG1 1556 aaPredicted RBP30.08■■■□□ 2.41
DDX55-207ENST00000540763 KIDINS220Q9ULH0 1771 aa30.08■■■□□ 2.41
DDX55-207ENST00000540763 CCDC141Q6ZP82 1450 aa30.07■■■□□ 2.4
DDX55-207ENST00000540763 AFAP1Q8N556 730 aa30.07■■■□□ 2.4
DDX55-207ENST00000540763 HNRNPMP52272 730 aaKnown RBP eCLIP30.06■■■□□ 2.4
DDX55-207ENST00000540763 RSPH4AQ5TD94 716 aa30.06■■■□□ 2.4
DDX55-207ENST00000540763 ATP7AQ04656 1500 aa30.02■■■□□ 2.4
DDX55-207ENST00000540763 CROCC2H7BZ55 1655 aa30.02■■■□□ 2.4
DDX55-207ENST00000540763 ABCA6Q8N139 1617 aa30.02■■■□□ 2.4
DDX55-207ENST00000540763 YEATS2Q9ULM3 1422 aa30.02■■■□□ 2.4
DDX55-207ENST00000540763 DIP2CQ9Y2E4 1556 aa30.02■■■□□ 2.4
DDX55-207ENST00000540763 REREQ9P2R6 1566 aa30.01■■■□□ 2.39
DDX55-207ENST00000540763 DNMT1P26358 1616 aaKnown RBP30■■■□□ 2.39
DDX55-207ENST00000540763 MAST1Q9Y2H9 1570 aa29.99■■■□□ 2.39
DDX55-207ENST00000540763 RTEL1-TNFRSF6BF6WH68 1400 aa29.99■■■□□ 2.39
DDX55-207ENST00000540763 SPAG9O60271 1321 aaKnown RBP29.97■■■□□ 2.39
DDX55-207ENST00000540763 ATP10AO60312 1499 aa29.97■■■□□ 2.39
DDX55-207ENST00000540763 C9orf84Q5VXU9 1444 aa29.96■■■□□ 2.39
DDX55-207ENST00000540763 ADGBQ8N7X0 1667 aa29.95■■■□□ 2.39
DDX55-207ENST00000540763 SHANK2Q9UPX8 1470 aa29.94■■■□□ 2.38
DDX55-207ENST00000540763 PPARGC1BQ86YN6 1023 aaKnown RBP29.92■■■□□ 2.38
DDX55-207ENST00000540763 SIGLEC1Q9BZZ2 1709 aa29.91■■■□□ 2.38
DDX55-207ENST00000540763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.9■■■□□ 2.38
DDX55-207ENST00000540763 PLXNC1O60486 1568 aa29.89■■■□□ 2.38
DDX55-207ENST00000540763 DAPK1P53355 1430 aa29.88■■■□□ 2.37
DDX55-207ENST00000540763 MYT1LQ9UL68 1186 aa29.88■■■□□ 2.37
DDX55-207ENST00000540763 RRBP1Q9P2E9 1410 aaKnown RBP29.88■■■□□ 2.37
DDX55-207ENST00000540763 ABCC5O15440 1437 aa29.87■■■□□ 2.37
DDX55-207ENST00000540763 TSPY4P0CV99 314 aa29.86■■■□□ 2.37
DDX55-207ENST00000540763 TSPY10P0CW01 314 aa29.86■■■□□ 2.37
DDX55-207ENST00000540763 AGLP35573 1532 aa29.86■■■□□ 2.37
DDX55-207ENST00000540763 BCORL1Q5H9F3 1711 aa29.85■■■□□ 2.37
DDX55-207ENST00000540763 ILDR1Q86SU0 546 aaPredicted RBP29.82■■■□□ 2.36
DDX55-207ENST00000540763 A2MP01023 1474 aa29.8■■■□□ 2.36
DDX55-207ENST00000540763 FAM50AQ14320 339 aaKnown RBP29.8■■■□□ 2.36
DDX55-207ENST00000540763 ADAMTSL3P82987 1691 aa29.79■■■□□ 2.36
DDX55-207ENST00000540763 ADGRL2O95490 1459 aa29.76■■■□□ 2.35
DDX55-207ENST00000540763 PTPRMP28827 1452 aa29.73■■■□□ 2.35
DDX55-207ENST00000540763 ARID4BQ4LE39 1312 aaPredicted RBP29.72■■■□□ 2.35
DDX55-207ENST00000540763 EIF2AK4Q9P2K8 1649 aaKnown RBP29.72■■■□□ 2.35
DDX55-207ENST00000540763 DHX29Q7Z478 1369 aaKnown RBP29.72■■■□□ 2.35
DDX55-207ENST00000540763 DUOX2Q9NRD8 1548 aa29.71■■■□□ 2.35
DDX55-207ENST00000540763 FER1L4A9Z1Z3 1794 aa29.69■■■□□ 2.34
DDX55-207ENST00000540763 ANKRD30AQ9BXX3 1397 aa29.68■■■□□ 2.34
DDX55-207ENST00000540763 MADDQ8WXG6 1647 aa29.67■■■□□ 2.34
DDX55-207ENST00000540763 NCOA1Q15788 1441 aa29.66■■■□□ 2.34
DDX55-207ENST00000540763 KIF15Q9NS87 1388 aa29.64■■■□□ 2.34
DDX55-207ENST00000540763 ROCK1Q13464 1354 aa29.64■■■□□ 2.33
DDX55-207ENST00000540763 PTPRKQ15262 1439 aa29.63■■■□□ 2.33
DDX55-207ENST00000540763 ERBINQ96RT1 1412 aa29.63■■■□□ 2.33
DDX55-207ENST00000540763 RNF17Q9BXT8 1623 aaKnown RBP29.63■■■□□ 2.33
DDX55-207ENST00000540763 FAM135AQ9P2D6 1515 aa29.61■■■□□ 2.33
DDX55-207ENST00000540763 RIMS1Q86UR5 1692 aaKnown RBP29.6■■■□□ 2.33
DDX55-207ENST00000540763 CHIC2Q9UKJ5 165 aa29.57■■■□□ 2.32
DDX55-207ENST00000540763 MROH2AA6NES4 1674 aa29.56■■■□□ 2.32
DDX55-207ENST00000540763 DEPDC5O75140 1603 aa29.55■■■□□ 2.32
DDX55-207ENST00000540763 RRP7BPQ9NSQ0 103 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms