RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 CARMIL2Q6F5E8 1435 aa29.93■■■□□ 2.38
LSM14A-202ENST00000540746 DDX10Q13206 875 aaKnown RBP29.9■■■□□ 2.38
LSM14A-202ENST00000540746 TRIM52Q96A61 297 aa29.9■■■□□ 2.38
LSM14A-202ENST00000540746 ROCK1Q13464 1354 aa29.89■■■□□ 2.38
LSM14A-202ENST00000540746 KIF14Q15058 1648 aa29.87■■■□□ 2.37
LSM14A-202ENST00000540746 ADCY10Q96PN6 1610 aa29.85■■■□□ 2.37
LSM14A-202ENST00000540746 MPHOSPH9Q99550 1183 aa29.84■■■□□ 2.37
LSM14A-202ENST00000540746 GPATCH8Q9UKJ3 1502 aaKnown RBP29.82■■■□□ 2.36
LSM14A-202ENST00000540746 ITSN2Q9NZM3 1697 aa29.81■■■□□ 2.36
LSM14A-202ENST00000540746 ABCA8O94911 1581 aa29.81■■■□□ 2.36
LSM14A-202ENST00000540746 KCNH8Q96L42 1107 aa29.81■■■□□ 2.36
LSM14A-202ENST00000540746 CAMSAP2Q08AD1 1489 aa29.81■■■□□ 2.36
LSM14A-202ENST00000540746 CFDP1Q9UEE9 299 aaPredicted RBP29.78■■■□□ 2.36
LSM14A-202ENST00000540746 FOXD1Q16676 465 aa29.76■■■□□ 2.35
LSM14A-202ENST00000540746 ATP10BO94823 1461 aa29.72■■■□□ 2.35
LSM14A-202ENST00000540746 ZNF777Q9ULD5 760 aaPredicted RBP29.68■■■□□ 2.34
LSM14A-202ENST00000540746 ANKRD30BQ9BXX2 1392 aa29.68■■■□□ 2.34
LSM14A-202ENST00000540746 CROCC2H7BZ55 1655 aa29.68■■■□□ 2.34
LSM14A-202ENST00000540746 ADGBQ8N7X0 1667 aa29.68■■■□□ 2.34
LSM14A-202ENST00000540746 NCOA1Q15788 1441 aa29.68■■■□□ 2.34
LSM14A-202ENST00000540746 CDC42BPAQ5VT25 1732 aa29.68■■■□□ 2.34
LSM14A-202ENST00000540746 ABCC10Q5T3U5 1492 aa29.66■■■□□ 2.34
LSM14A-202ENST00000540746 PLEKHD1A6NEE1 506 aa29.66■■■□□ 2.34
LSM14A-202ENST00000540746 L3MBTL2Q969R5 705 aa29.63■■■□□ 2.33
LSM14A-202ENST00000540746 CHD1O14646 1710 aa29.63■■■□□ 2.33
LSM14A-202ENST00000540746 ADGRL2O95490 1459 aa29.63■■■□□ 2.33
LSM14A-202ENST00000540746 RPRD2Q5VT52 1461 aaKnown RBP29.61■■■□□ 2.33
LSM14A-202ENST00000540746 SLC4A1APQ9BWU0 796 aaKnown RBP29.6■■■□□ 2.33
LSM14A-202ENST00000540746 PZPP20742 1482 aa29.6■■■□□ 2.33
LSM14A-202ENST00000540746 PTPRGP23470 1445 aa29.58■■■□□ 2.33
LSM14A-202ENST00000540746 TEX14Q8IWB6 1497 aa29.55■■■□□ 2.32
LSM14A-202ENST00000540746 HSPA5P11021 654 aaKnown RBP29.54■■■□□ 2.32
LSM14A-202ENST00000540746 ANP32CO43423 234 aa29.52■■■□□ 2.32
LSM14A-202ENST00000540746 ANKRD30AQ9BXX3 1397 aa29.52■■■□□ 2.32
LSM14A-202ENST00000540746 CCER2I3L3R5 266 aa29.49■■■□□ 2.31
LSM14A-202ENST00000540746 SHROOM2Q13796 1616 aa29.49■■■□□ 2.31
LSM14A-202ENST00000540746 PELP1Q8IZL8 1130 aaKnown RBP29.49■■■□□ 2.31
LSM14A-202ENST00000540746 WASHC2AQ641Q2 1341 aa29.47■■■□□ 2.31
LSM14A-202ENST00000540746 SHANK2Q9UPX8 1470 aa29.47■■■□□ 2.31
LSM14A-202ENST00000540746 NBPF8Q3BBV2 869 aa29.47■■■□□ 2.31
LSM14A-202ENST00000540746 ANKRD50Q9ULJ7 1429 aa29.46■■■□□ 2.31
LSM14A-202ENST00000540746 EIF4G2P78344 907 aaKnown RBP eCLIP29.46■■■□□ 2.311e-21■■■□□ 15
LSM14A-202ENST00000540746 C9orf84Q5VXU9 1444 aa29.46■■■□□ 2.31
LSM14A-202ENST00000540746 KIAA1107Q9UPP5 1409 aa29.42■■■□□ 2.3
LSM14A-202ENST00000540746 CDC42BPBQ9Y5S2 1711 aa29.41■■■□□ 2.3
LSM14A-202ENST00000540746 ERCC6L2Q5T890 1561 aa29.4■■■□□ 2.3
LSM14A-202ENST00000540746 MBD5Q9P267 1494 aa29.39■■■□□ 2.3
LSM14A-202ENST00000540746 HNRNPMP52272 730 aaKnown RBP eCLIP29.39■■■□□ 2.292e-8■■■□□ 15.5
LSM14A-202ENST00000540746 ARHGEF5Q12774 1597 aa29.38■■■□□ 2.29
LSM14A-202ENST00000540746 PKD2Q13563 968 aa29.37■■■□□ 2.29
LSM14A-202ENST00000540746 PREX2Q70Z35 1606 aa29.37■■■□□ 2.29
LSM14A-202ENST00000540746 SAMD9LQ8IVG5 1584 aa29.37■■■□□ 2.29
LSM14A-202ENST00000540746 SUPT16HQ9Y5B9 1047 aaKnown RBP29.35■■■□□ 2.29
LSM14A-202ENST00000540746 C11orf95C9JLR9 678 aaPredicted RBP29.35■■■□□ 2.29
LSM14A-202ENST00000540746 TSPY4P0CV99 314 aa29.34■■■□□ 2.29
LSM14A-202ENST00000540746 TSPY10P0CW01 314 aa29.34■■■□□ 2.29
LSM14A-202ENST00000540746 SPATA31E1Q6ZUB1 1445 aa29.31■■■□□ 2.28
LSM14A-202ENST00000540746 NUP155O75694 1391 aa29.3■■■□□ 2.28
LSM14A-202ENST00000540746 TTC37Q6PGP7 1564 aa29.3■■■□□ 2.28
LSM14A-202ENST00000540746 KIF15Q9NS87 1388 aa29.3■■■□□ 2.28
LSM14A-202ENST00000540746 KDM5DQ9BY66 1539 aa29.28■■■□□ 2.28
LSM14A-202ENST00000540746 CCDC141Q6ZP82 1450 aa29.28■■■□□ 2.28
LSM14A-202ENST00000540746 ABCC2Q92887 1545 aa29.27■■■□□ 2.28
LSM14A-202ENST00000540746 CCDC7Q96M83 1385 aa29.27■■■□□ 2.28
LSM14A-202ENST00000540746 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.26■■■□□ 2.274e-9■■□□□ 12.8
LSM14A-202ENST00000540746 CNTLNQ9NXG0 1405 aa29.25■■■□□ 2.27
LSM14A-202ENST00000540746 SYCP2Q9BX26 1530 aa29.22■■■□□ 2.27
LSM14A-202ENST00000540746 POLR1AO95602 1720 aaPredicted RBP29.2■■■□□ 2.27
LSM14A-202ENST00000540746 ARHGAP5Q13017 1502 aa29.2■■■□□ 2.26
LSM14A-202ENST00000540746 CLASP1Q7Z460 1538 aa29.19■■■□□ 2.26
LSM14A-202ENST00000540746 RSPH4AQ5TD94 716 aa29.17■■■□□ 2.26
LSM14A-202ENST00000540746 KIF7Q2M1P5 1343 aa29.16■■■□□ 2.26
LSM14A-202ENST00000540746 MYO5CQ9NQX4 1742 aa29.16■■■□□ 2.26
LSM14A-202ENST00000540746 ZNF326Q5BKZ1 582 aaKnown RBP29.13■■■□□ 2.25
LSM14A-202ENST00000540746 MAST1Q9Y2H9 1570 aa29.13■■■□□ 2.25
LSM14A-202ENST00000540746 FAM135AQ9P2D6 1515 aa29.11■■■□□ 2.25
LSM14A-202ENST00000540746 ZCCHC11Q5TAX3 1644 aaKnown RBP29.11■■■□□ 2.25
LSM14A-202ENST00000540746 UHRF1BP1Q6BDS2 1440 aa29.1■■■□□ 2.25
LSM14A-202ENST00000540746 BCORL1Q5H9F3 1711 aa29.08■■■□□ 2.25
LSM14A-202ENST00000540746 USP47Q96K76 1375 aa29.08■■■□□ 2.25
LSM14A-202ENST00000540746 ARHGEF12Q9NZN5 1544 aa29.08■■■□□ 2.25
LSM14A-202ENST00000540746 KDM5CP41229 1560 aa29.07■■■□□ 2.24
LSM14A-202ENST00000540746 CCDC184Q52MB2 194 aa29.06■■■□□ 2.24
LSM14A-202ENST00000540746 PRKRIP1Q9H875 184 aaPredicted RBP29.06■■■□□ 2.24
LSM14A-202ENST00000540746 UHRF1BP1LA0JNW5 1464 aa29.06■■■□□ 2.24
LSM14A-202ENST00000540746 RALGAPBQ86X10 1494 aa29.04■■■□□ 2.24
LSM14A-202ENST00000540746 UNC13BO14795 1591 aa29.03■■■□□ 2.24
LSM14A-202ENST00000540746 PLXNC1O60486 1568 aa29.03■■■□□ 2.24
LSM14A-202ENST00000540746 PLEKHH2Q8IVE3 1493 aa29.03■■■□□ 2.24
LSM14A-202ENST00000540746 PLCH2O75038 1416 aa29.01■■■□□ 2.23
LSM14A-202ENST00000540746 HNRNPUQ00839 825 aaKnown RBP eCLIP28.98■■■□□ 2.23
LSM14A-202ENST00000540746 FKBP8Q14318 412 aa28.98■■■□□ 2.23
LSM14A-202ENST00000540746 KDM2AQ9Y2K7 1162 aa28.96■■■□□ 2.23
LSM14A-202ENST00000540746 DCAF11Q8TEB1 546 aa28.95■■■□□ 2.23
LSM14A-202ENST00000540746 PLA2R1Q13018 1463 aa28.94■■■□□ 2.22
LSM14A-202ENST00000540746 IQGAP3Q86VI3 1631 aa28.93■■■□□ 2.22
LSM14A-202ENST00000540746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.92■■■□□ 2.223e-8■■□□□ 12.4
LSM14A-202ENST00000540746 ABCC1P33527 1531 aa28.92■■■□□ 2.22
LSM14A-202ENST00000540746 DUOX2Q9NRD8 1548 aa28.92■■■□□ 2.22
LSM14A-202ENST00000540746 CARD11Q9BXL7 1154 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms