RNA–Protein interactions for RNA: ENST00000540606.5

ATE1-208, Transcript of arginyltransferase 1, humanhuman

TSL 2 BASIC

Gene ATE1, Length 5,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATE1-208ENST00000540606 RTF1Q92541 710 aaKnown RBP17.05■□□□□ 0.32
ATE1-208ENST00000540606 CSB-PGBD3P0DP91 1061 aa17.04■□□□□ 0.32
ATE1-208ENST00000540606 U2AF1L5P0DN76 240 aaPredicted RBP17.04■□□□□ 0.32
ATE1-208ENST00000540606 U2AF1Q01081 240 aaKnown RBP eCLIP17.04■□□□□ 0.32
ATE1-208ENST00000540606 CHMP4BQ9H444 224 aaKnown RBP17.04■□□□□ 0.32
ATE1-208ENST00000540606 MS4A1P11836 297 aa17.03■□□□□ 0.32
ATE1-208ENST00000540606 NUP155O75694 1391 aa17.03■□□□□ 0.32
ATE1-208ENST00000540606 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
ATE1-208ENST00000540606 ANP32EQ9BTT0 268 aa17.02■□□□□ 0.31
ATE1-208ENST00000540606 NUTM2FA1L443 756 aa17.01■□□□□ 0.31
ATE1-208ENST00000540606 HNRNPMP52272 730 aaKnown RBP eCLIP17■□□□□ 0.312e-7■■■■■ 29.2
ATE1-208ENST00000540606 MPHOSPH9Q99550 1183 aa17■□□□□ 0.31
ATE1-208ENST00000540606 CARMIL2Q6F5E8 1435 aa17■□□□□ 0.31
ATE1-208ENST00000540606 HSP90AB1P08238 724 aaKnown RBP16.99■□□□□ 0.31
ATE1-208ENST00000540606 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
ATE1-208ENST00000540606 DNTTIP2Q5QJE6 756 aaKnown RBP16.97■□□□□ 0.31
ATE1-208ENST00000540606 ISY1Q9ULR0 285 aaKnown RBP16.97■□□□□ 0.31
ATE1-208ENST00000540606 TIMELESSQ9UNS1 1208 aa16.96■□□□□ 0.31
ATE1-208ENST00000540606 CCDC9Q9Y3X0 531 aaKnown RBP16.95■□□□□ 0.3
ATE1-208ENST00000540606 SPRYD3Q8NCJ5 442 aa16.95■□□□□ 0.3
ATE1-208ENST00000540606 PDS5BQ9NTI5 1447 aa16.94■□□□□ 0.3
ATE1-208ENST00000540606 GLIPR1L2Q4G1C9 344 aa16.94■□□□□ 0.3
ATE1-208ENST00000540606 ARHGAP35Q9NRY4 1499 aa16.93■□□□□ 0.3
ATE1-208ENST00000540606 ROCK2O75116 1388 aaKnown RBP16.93■□□□□ 0.3
ATE1-208ENST00000540606 WASHC2CQ9Y4E1 1318 aa16.92■□□□□ 0.3
ATE1-208ENST00000540606 KTN1Q86UP2 1357 aaKnown RBP16.91■□□□□ 0.3
ATE1-208ENST00000540606 VPS8Q8N3P4 1428 aa16.91■□□□□ 0.3
ATE1-208ENST00000540606 CCDC88BA6NC98 1476 aa16.9■□□□□ 0.3
ATE1-208ENST00000540606 GOLGA6L4A6NEF3 574 aa16.9■□□□□ 0.3
ATE1-208ENST00000540606 NGDNQ8NEJ9 315 aaKnown RBP16.9■□□□□ 0.3
ATE1-208ENST00000540606 LTV1Q96GA3 475 aaPredicted RBP16.9■□□□□ 0.3
ATE1-208ENST00000540606 JPH4Q96JJ6 628 aa16.9■□□□□ 0.3
ATE1-208ENST00000540606 SPAG9O60271 1321 aaKnown RBP16.89■□□□□ 0.29
ATE1-208ENST00000540606 L3MBTL2Q969R5 705 aa16.89■□□□□ 0.29
ATE1-208ENST00000540606 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
ATE1-208ENST00000540606 ANKRD30AQ9BXX3 1397 aa16.88■□□□□ 0.29
ATE1-208ENST00000540606 RAB3GAP2Q9H2M9 1393 aa16.88■□□□□ 0.29
ATE1-208ENST00000540606 IPO8O15397 1037 aaKnown RBP16.87■□□□□ 0.29
ATE1-208ENST00000540606 EID1Q9Y6B2 187 aa16.87■□□□□ 0.29
ATE1-208ENST00000540606 ITPRIPQ8IWB1 547 aa16.86■□□□□ 0.29
ATE1-208ENST00000540606 TRAK1Q9UPV9 953 aa16.86■□□□□ 0.29
ATE1-208ENST00000540606 MROH2BQ7Z745 1585 aa16.86■□□□□ 0.29
ATE1-208ENST00000540606 CYB5RLQ6IPT4 315 aa16.86■□□□□ 0.29
ATE1-208ENST00000540606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.86■□□□□ 0.291e-6■■■□□ 14.9
ATE1-208ENST00000540606 HSCBQ8IWL3 235 aa16.85■□□□□ 0.29
ATE1-208ENST00000540606 CLUAP1Q96AJ1 413 aa16.85■□□□□ 0.29
ATE1-208ENST00000540606 CCER2I3L3R5 266 aa16.85■□□□□ 0.29
ATE1-208ENST00000540606 NOP58Q9Y2X3 529 aaKnown RBP16.84■□□□□ 0.29
ATE1-208ENST00000540606 CHMP3Q9Y3E7 222 aa16.83■□□□□ 0.29
ATE1-208ENST00000540606 CCDC146Q8IYE0 955 aa16.83■□□□□ 0.29
ATE1-208ENST00000540606 RTN4Q9NQC3 1192 aaKnown RBP16.83■□□□□ 0.29
ATE1-208ENST00000540606 TERF2IPQ9NYB0 399 aa16.83■□□□□ 0.28
ATE1-208ENST00000540606 RCAN3Q9UKA8 241 aa16.83■□□□□ 0.28
ATE1-208ENST00000540606 FMN1Q68DA7 1419 aa16.83■□□□□ 0.28
ATE1-208ENST00000540606 MCCP23508 829 aa16.82■□□□□ 0.28
ATE1-208ENST00000540606 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
ATE1-208ENST00000540606 STK31Q9BXU1 1019 aa16.82■□□□□ 0.28
ATE1-208ENST00000540606 AMPHP49418 695 aa16.81■□□□□ 0.28
ATE1-208ENST00000540606 KIAA1211Q6ZU35 1233 aa16.81■□□□□ 0.28
ATE1-208ENST00000540606 SLC4A10Q6U841 1118 aa16.81■□□□□ 0.28
ATE1-208ENST00000540606 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
ATE1-208ENST00000540606 CLSTN1O94985 981 aa16.8■□□□□ 0.28
ATE1-208ENST00000540606 CALD1Q05682 793 aaKnown RBP16.8■□□□□ 0.28
ATE1-208ENST00000540606 RALBP1Q15311 655 aa16.79■□□□□ 0.28
ATE1-208ENST00000540606 SMC4Q9NTJ3 1288 aa16.79■□□□□ 0.28
ATE1-208ENST00000540606 GORABQ5T7V8 394 aa16.79■□□□□ 0.28
ATE1-208ENST00000540606 GNL2Q13823 731 aaKnown RBP16.77■□□□□ 0.27
ATE1-208ENST00000540606 ERICH6BQ5W0A0 696 aa16.77■□□□□ 0.27
ATE1-208ENST00000540606 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
ATE1-208ENST00000540606 TAF7LQ5H9L4 462 aa16.75■□□□□ 0.27
ATE1-208ENST00000540606 ELL2O00472 640 aaPredicted RBP16.75■□□□□ 0.27
ATE1-208ENST00000540606 RWDD1Q9H446 243 aaPredicted RBP16.75■□□□□ 0.27
ATE1-208ENST00000540606 RRP7AQ9Y3A4 280 aaKnown RBP16.75■□□□□ 0.27
ATE1-208ENST00000540606 AMER1Q5JTC6 1135 aaPredicted RBP16.74■□□□□ 0.27
ATE1-208ENST00000540606 ST20-MTHFSA0A0A6YYL1 179 aa16.74■□□□□ 0.27
ATE1-208ENST00000540606 RSPH4AQ5TD94 716 aa16.74■□□□□ 0.27
ATE1-208ENST00000540606 SLKQ9H2G2 1235 aaPredicted RBP16.73■□□□□ 0.27
ATE1-208ENST00000540606 NAP1L5Q96NT1 182 aaPredicted RBP16.73■□□□□ 0.27
ATE1-208ENST00000540606 NRDCO43847 1150 aa16.72■□□□□ 0.27
ATE1-208ENST00000540606 GTF2E1P29083 439 aaPredicted RBP16.72■□□□□ 0.27
ATE1-208ENST00000540606 EIF3AQ14152 1382 aaKnown RBP16.71■□□□□ 0.27
ATE1-208ENST00000540606 GOLGA6L6A8MZA4 724 aa16.71■□□□□ 0.27
ATE1-208ENST00000540606 TRIM6-TRIM34B2RNG4 842 aa16.71■□□□□ 0.27
ATE1-208ENST00000540606 NLRP13Q86W25 1043 aa16.71■□□□□ 0.27
ATE1-208ENST00000540606 TMX4Q9H1E5 349 aaPredicted RBP16.71■□□□□ 0.27
ATE1-208ENST00000540606 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
ATE1-208ENST00000540606 MFAP1P55081 439 aaKnown RBP16.68■□□□□ 0.26
ATE1-208ENST00000540606 BCL2L13Q9BXK5 485 aa16.68■□□□□ 0.26
ATE1-208ENST00000540606 CHMP4AQ9BY43 222 aa16.68■□□□□ 0.26
ATE1-208ENST00000540606 DRC7Q8IY82 874 aa16.67■□□□□ 0.26
ATE1-208ENST00000540606 PANK3Q9H999 370 aa16.67■□□□□ 0.26
ATE1-208ENST00000540606 GZF1Q9H116 711 aaPredicted RBP16.66■□□□□ 0.26
ATE1-208ENST00000540606 RBM19Q9Y4C8 960 aaKnown RBP16.66■□□□□ 0.26
ATE1-208ENST00000540606 NOL8Q76FK4 1167 aaKnown RBP16.66■□□□□ 0.26
ATE1-208ENST00000540606 MINK1Q8N4C8 1332 aaPredicted RBP16.66■□□□□ 0.26
ATE1-208ENST00000540606 FRAT2O75474 233 aaPredicted RBP16.66■□□□□ 0.26
ATE1-208ENST00000540606 CFAP44Q96MT7 982 aa16.65■□□□□ 0.26
ATE1-208ENST00000540606 RAPGEF2Q9Y4G8 1499 aa16.65■□□□□ 0.26
ATE1-208ENST00000540606 HMMRO75330 724 aa16.65■□□□□ 0.26
ATE1-208ENST00000540606 G3V3G9 751 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms