RNA–Protein interactions for RNA: ENST00000540585.1

NHLRC4-202, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC4, Length 2,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-202ENST00000540585 SETD5Q9C0A6 1442 aa32.22■■■□□ 2.75
NHLRC4-202ENST00000540585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.15■■■□□ 2.748e-6■□□□□ 10.5
NHLRC4-202ENST00000540585 DIP2BQ9P265 1576 aa32.15■■■□□ 2.74
NHLRC4-202ENST00000540585 ABCC10Q5T3U5 1492 aa32.15■■■□□ 2.74
NHLRC4-202ENST00000540585 TTC37Q6PGP7 1564 aa32.14■■■□□ 2.74
NHLRC4-202ENST00000540585 ABCA9Q8IUA7 1624 aa32.11■■■□□ 2.73
NHLRC4-202ENST00000540585 PTPN23Q9H3S7 1636 aa32.11■■■□□ 2.73
NHLRC4-202ENST00000540585 GLI2P10070 1586 aa32.09■■■□□ 2.73
NHLRC4-202ENST00000540585 DIEXFQ68CQ4 756 aaKnown RBP32.09■■■□□ 2.73
NHLRC4-202ENST00000540585 KIF13AQ9H1H9 1805 aa32.09■■■□□ 2.73
NHLRC4-202ENST00000540585 FAM69CQ0P6D2 419 aa32.05■■■□□ 2.72
NHLRC4-202ENST00000540585 TCOF1Q13428 1488 aaKnown RBP32.04■■■□□ 2.72
NHLRC4-202ENST00000540585 CDC42BPAQ5VT25 1732 aa32.03■■■□□ 2.72
NHLRC4-202ENST00000540585 MAP3K4Q9Y6R4 1608 aa32.02■■■□□ 2.72
NHLRC4-202ENST00000540585 MYO5CQ9NQX4 1742 aa32.01■■■□□ 2.71
NHLRC4-202ENST00000540585 PTPRKQ15262 1439 aa32.01■■■□□ 2.71
NHLRC4-202ENST00000540585 GPATCH8Q9UKJ3 1502 aaKnown RBP32■■■□□ 2.71
NHLRC4-202ENST00000540585 MIA2Q96PC5 1412 aa31.98■■■□□ 2.71
NHLRC4-202ENST00000540585 PREX2Q70Z35 1606 aa31.97■■■□□ 2.71
NHLRC4-202ENST00000540585 ITSN2Q9NZM3 1697 aa31.97■■■□□ 2.71
NHLRC4-202ENST00000540585 CD109Q6YHK3 1445 aa31.96■■■□□ 2.71
NHLRC4-202ENST00000540585 CDC42BPBQ9Y5S2 1711 aa31.96■■■□□ 2.71
NHLRC4-202ENST00000540585 HFM1A2PYH4 1435 aa31.95■■■□□ 2.71
NHLRC4-202ENST00000540585 ZNF316A6NFI3 1004 aaPredicted RBP31.94■■■□□ 2.7
NHLRC4-202ENST00000540585 PLCH2O75038 1416 aa31.94■■■□□ 2.7
NHLRC4-202ENST00000540585 TRHP20396 242 aaPredicted RBP31.91■■■□□ 2.7
NHLRC4-202ENST00000540585 TSPOAP1O95153 1857 aa31.89■■■□□ 2.7
NHLRC4-202ENST00000540585 ARAP3Q8WWN8 1544 aa31.89■■■□□ 2.7
NHLRC4-202ENST00000540585 ARHGAP5Q13017 1502 aa31.88■■■□□ 2.69
NHLRC4-202ENST00000540585 PPRC1Q5VV67 1664 aaKnown RBP31.88■■■□□ 2.69
NHLRC4-202ENST00000540585 CFDP1Q9UEE9 299 aaPredicted RBP31.86■■■□□ 2.69
NHLRC4-202ENST00000540585 NAIPQ13075 1403 aa31.85■■■□□ 2.69
NHLRC4-202ENST00000540585 FANCAO15360 1455 aa31.82■■■□□ 2.68
NHLRC4-202ENST00000540585 EFCAB2Q5VUJ9 269 aa31.79■■■□□ 2.68
NHLRC4-202ENST00000540585 SAMD9LQ8IVG5 1584 aa31.79■■■□□ 2.68
NHLRC4-202ENST00000540585 GCC2Q8IWJ2 1684 aa31.78■■■□□ 2.68
NHLRC4-202ENST00000540585 ZNF777Q9ULD5 760 aaPredicted RBP31.78■■■□□ 2.68
NHLRC4-202ENST00000540585 AKNAQ7Z591 1439 aa31.78■■■□□ 2.68
NHLRC4-202ENST00000540585 ZNF644Q9H582 1327 aaPredicted RBP31.77■■■□□ 2.68
NHLRC4-202ENST00000540585 CFAP74Q9C0B2 1584 aa31.76■■■□□ 2.67
NHLRC4-202ENST00000540585 CAMSAP2Q08AD1 1489 aa31.75■■■□□ 2.67
NHLRC4-202ENST00000540585 TEX14Q8IWB6 1497 aa31.74■■■□□ 2.67
NHLRC4-202ENST00000540585 NEO1Q92859 1461 aa31.73■■■□□ 2.67
NHLRC4-202ENST00000540585 DNMT1P26358 1616 aaKnown RBP31.72■■■□□ 2.67
NHLRC4-202ENST00000540585 ABCC1P33527 1531 aa31.69■■■□□ 2.66
NHLRC4-202ENST00000540585 DAPK1P53355 1430 aa31.69■■■□□ 2.66
NHLRC4-202ENST00000540585 CHIC2Q9UKJ5 165 aa31.68■■■□□ 2.66
NHLRC4-202ENST00000540585 RRP7BPQ9NSQ0 103 aa31.66■■■□□ 2.66
NHLRC4-202ENST00000540585 SYCP2Q9BX26 1530 aa31.66■■■□□ 2.66
NHLRC4-202ENST00000540585 ADGRL1O94910 1474 aa31.66■■■□□ 2.66
NHLRC4-202ENST00000540585 ARHGEF12Q9NZN5 1544 aa31.66■■■□□ 2.66
NHLRC4-202ENST00000540585 PLEKHH2Q8IVE3 1493 aa31.65■■■□□ 2.66
NHLRC4-202ENST00000540585 ABCC5O15440 1437 aa31.63■■■□□ 2.65
NHLRC4-202ENST00000540585 KIAA1107Q9UPP5 1409 aa31.63■■■□□ 2.65
NHLRC4-202ENST00000540585 HNRNPMP52272 730 aaKnown RBP eCLIP31.61■■■□□ 2.65
NHLRC4-202ENST00000540585 MBD5Q9P267 1494 aa31.61■■■□□ 2.65
NHLRC4-202ENST00000540585 ROCK1Q13464 1354 aa31.61■■■□□ 2.65
NHLRC4-202ENST00000540585 SIN3AQ96ST3 1273 aa31.61■■■□□ 2.65
NHLRC4-202ENST00000540585 SCAPERQ9BY12 1400 aa31.61■■■□□ 2.65
NHLRC4-202ENST00000540585 KDM6BO15054 1643 aa31.58■■■□□ 2.65
NHLRC4-202ENST00000540585 ARHGEF5Q12774 1597 aa31.57■■■□□ 2.64
NHLRC4-202ENST00000540585 TRAPPC8Q9Y2L5 1435 aa31.55■■■□□ 2.64
NHLRC4-202ENST00000540585 TIMELESSQ9UNS1 1208 aa31.54■■■□□ 2.64
NHLRC4-202ENST00000540585 DENND4BO75064 1496 aaPredicted RBP31.52■■■□□ 2.64
NHLRC4-202ENST00000540585 POGZQ7Z3K3 1410 aa31.51■■■□□ 2.64
NHLRC4-202ENST00000540585 CCDC141Q6ZP82 1450 aa31.51■■■□□ 2.64
NHLRC4-202ENST00000540585 COL17A1Q9UMD9 1497 aaPredicted RBP31.51■■■□□ 2.64
NHLRC4-202ENST00000540585 CROCC2H7BZ55 1655 aa31.51■■■□□ 2.63
NHLRC4-202ENST00000540585 RICTORQ6R327 1708 aa31.51■■■□□ 2.63
NHLRC4-202ENST00000540585 FRMPD1Q5SYB0 1578 aa31.49■■■□□ 2.63
NHLRC4-202ENST00000540585 AFAP1Q8N556 730 aa31.48■■■□□ 2.63
NHLRC4-202ENST00000540585 ADGBQ8N7X0 1667 aa31.48■■■□□ 2.63
NHLRC4-202ENST00000540585 ZNF518AQ6AHZ1 1483 aa31.48■■■□□ 2.63
NHLRC4-202ENST00000540585 RAPGEF3O95398 923 aa31.47■■■□□ 2.63
NHLRC4-202ENST00000540585 RSPH4AQ5TD94 716 aa31.47■■■□□ 2.63
NHLRC4-202ENST00000540585 KDM5CP41229 1560 aa31.44■■■□□ 2.62
NHLRC4-202ENST00000540585 TRIM52Q96A61 297 aa31.42■■■□□ 2.62
NHLRC4-202ENST00000540585 ADGRL2O95490 1459 aa31.41■■■□□ 2.62
NHLRC4-202ENST00000540585 SHANK2Q9UPX8 1470 aa31.41■■■□□ 2.62
NHLRC4-202ENST00000540585 C9orf84Q5VXU9 1444 aa31.39■■■□□ 2.62
NHLRC4-202ENST00000540585 MAST1Q9Y2H9 1570 aa31.39■■■□□ 2.62
NHLRC4-202ENST00000540585 TSPY4P0CV99 314 aa31.38■■■□□ 2.61
NHLRC4-202ENST00000540585 TSPY10P0CW01 314 aa31.38■■■□□ 2.61
NHLRC4-202ENST00000540585 NCOA1Q15788 1441 aa31.37■■■□□ 2.61
NHLRC4-202ENST00000540585 TONSLQ96HA7 1378 aa31.37■■■□□ 2.61
NHLRC4-202ENST00000540585 ZMYM4Q5VZL5 1548 aa31.36■■■□□ 2.61
NHLRC4-202ENST00000540585 INO80Q9ULG1 1556 aaPredicted RBP31.36■■■□□ 2.61
NHLRC4-202ENST00000540585 SPAG9O60271 1321 aaKnown RBP31.36■■■□□ 2.61
NHLRC4-202ENST00000540585 ZFYVE16Q7Z3T8 1539 aa31.35■■■□□ 2.61
NHLRC4-202ENST00000540585 HECW2Q9P2P5 1572 aa31.35■■■□□ 2.61
NHLRC4-202ENST00000540585 KIDINS220Q9ULH0 1771 aa31.33■■■□□ 2.61
NHLRC4-202ENST00000540585 ATP7AQ04656 1500 aa31.33■■■□□ 2.61
NHLRC4-202ENST00000540585 MLH3Q9UHC1 1453 aa31.33■■■□□ 2.61
NHLRC4-202ENST00000540585 PPP1R15AO75807 674 aaPredicted RBP31.32■■■□□ 2.6
NHLRC4-202ENST00000540585 MPHOSPH9Q99550 1183 aa31.32■■■□□ 2.6
NHLRC4-202ENST00000540585 RTEL1-TNFRSF6BF6WH68 1400 aa31.31■■■□□ 2.6
NHLRC4-202ENST00000540585 ANKRD30AQ9BXX3 1397 aa31.3■■■□□ 2.6
NHLRC4-202ENST00000540585 PLXNC1O60486 1568 aa31.27■■■□□ 2.6
NHLRC4-202ENST00000540585 MYT1LQ9UL68 1186 aa31.26■■■□□ 2.59
NHLRC4-202ENST00000540585 MAGI2Q86UL8 1455 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms