RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 PTPRMP28827 1452 aa27.25■■□□□ 1.95
PSMD3-204ENST00000540504 CASKIN1Q8WXD9 1431 aa27.25■■□□□ 1.95
PSMD3-204ENST00000540504 CCDC18Q5T9S5 1454 aa27.25■■□□□ 1.95
PSMD3-204ENST00000540504 ZFYVE16Q7Z3T8 1539 aa27.24■■□□□ 1.95
PSMD3-204ENST00000540504 POGZQ7Z3K3 1410 aa27.24■■□□□ 1.95
PSMD3-204ENST00000540504 PCF11O94913 1555 aaKnown RBP27.22■■□□□ 1.95
PSMD3-204ENST00000540504 MADDQ8WXG6 1647 aa27.19■■□□□ 1.94
PSMD3-204ENST00000540504 YEATS2Q9ULM3 1422 aa27.19■■□□□ 1.94
PSMD3-204ENST00000540504 ARHGAP5Q13017 1502 aa27.17■■□□□ 1.94
PSMD3-204ENST00000540504 FYCO1Q9BQS8 1478 aa27.17■■□□□ 1.94
PSMD3-204ENST00000540504 ZNF518AQ6AHZ1 1483 aa27.13■■□□□ 1.93
PSMD3-204ENST00000540504 CDC42BPBQ9Y5S2 1711 aa27.11■■□□□ 1.93
PSMD3-204ENST00000540504 ATP10AO60312 1499 aa27.1■■□□□ 1.93
PSMD3-204ENST00000540504 RIMS1Q86UR5 1692 aaKnown RBP27.1■■□□□ 1.93
PSMD3-204ENST00000540504 SIGLEC1Q9BZZ2 1709 aa27.09■■□□□ 1.93
PSMD3-204ENST00000540504 PREX2Q70Z35 1606 aa27.08■■□□□ 1.93
PSMD3-204ENST00000540504 KDM5CP41229 1560 aa27.08■■□□□ 1.93
PSMD3-204ENST00000540504 C9orf84Q5VXU9 1444 aa27.07■■□□□ 1.92
PSMD3-204ENST00000540504 AFAP1Q8N556 730 aa27.03■■□□□ 1.92
PSMD3-204ENST00000540504 CDC42BPAQ5VT25 1732 aa27.01■■□□□ 1.91
PSMD3-204ENST00000540504 ABCC1P33527 1531 aa27■■□□□ 1.91
PSMD3-204ENST00000540504 FER1L4A9Z1Z3 1794 aa26.99■■□□□ 1.91
PSMD3-204ENST00000540504 MLH3Q9UHC1 1453 aa26.99■■□□□ 1.91
PSMD3-204ENST00000540504 MLECQ14165 292 aa26.98■■□□□ 1.91
PSMD3-204ENST00000540504 ARHGEF12Q9NZN5 1544 aa26.98■■□□□ 1.91
PSMD3-204ENST00000540504 ITSN2Q9NZM3 1697 aa26.97■■□□□ 1.91
PSMD3-204ENST00000540504 LMTK3Q96Q04 1460 aa26.96■■□□□ 1.91
PSMD3-204ENST00000540504 MYT1LQ9UL68 1186 aa26.96■■□□□ 1.91
PSMD3-204ENST00000540504 REREQ9P2R6 1566 aa26.96■■□□□ 1.91
PSMD3-204ENST00000540504 DIP2CQ9Y2E4 1556 aa26.95■■□□□ 1.9
PSMD3-204ENST00000540504 TRAPPC8Q9Y2L5 1435 aa26.94■■□□□ 1.9
PSMD3-204ENST00000540504 ILDR1Q86SU0 546 aaPredicted RBP26.93■■□□□ 1.9
PSMD3-204ENST00000540504 GPATCH8Q9UKJ3 1502 aaKnown RBP26.91■■□□□ 1.9
PSMD3-204ENST00000540504 ABCA6Q8N139 1617 aa26.9■■□□□ 1.9
PSMD3-204ENST00000540504 MTUS2Q5JR59 1369 aa26.89■■□□□ 1.9
PSMD3-204ENST00000540504 CEP162Q5TB80 1403 aa26.88■■□□□ 1.89
PSMD3-204ENST00000540504 SAMD9LQ8IVG5 1584 aa26.88■■□□□ 1.89
PSMD3-204ENST00000540504 PLPPR3Q6T4P5 718 aa26.87■■□□□ 1.89
PSMD3-204ENST00000540504 AGLP35573 1532 aa26.86■■□□□ 1.89
PSMD3-204ENST00000540504 ZNF777Q9ULD5 760 aaPredicted RBP26.86■■□□□ 1.89
PSMD3-204ENST00000540504 KIDINS220Q9ULH0 1771 aa26.86■■□□□ 1.89
PSMD3-204ENST00000540504 CCNB3Q8WWL7 1395 aa26.84■■□□□ 1.89
PSMD3-204ENST00000540504 PLEKHH2Q8IVE3 1493 aa26.84■■□□□ 1.89
PSMD3-204ENST00000540504 KIAA1107Q9UPP5 1409 aa26.83■■□□□ 1.89
PSMD3-204ENST00000540504 CFDP1Q9UEE9 299 aaPredicted RBP26.83■■□□□ 1.89
PSMD3-204ENST00000540504 SYCP2Q9BX26 1530 aa26.82■■□□□ 1.88
PSMD3-204ENST00000540504 EHBP1L1Q8N3D4 1523 aa26.8■■□□□ 1.88
PSMD3-204ENST00000540504 HNRNPMP52272 730 aaKnown RBP eCLIP26.78■■□□□ 1.88
PSMD3-204ENST00000540504 PREX1Q8TCU6 1659 aa26.77■■□□□ 1.88
PSMD3-204ENST00000540504 SPAG9O60271 1321 aaKnown RBP26.77■■□□□ 1.88
PSMD3-204ENST00000540504 HSPA2P54652 639 aa26.77■■□□□ 1.88
PSMD3-204ENST00000540504 CEBPAP49715 358 aaPredicted RBP26.75■■□□□ 1.87
PSMD3-204ENST00000540504 ESF1Q9H501 851 aaKnown RBP26.74■■□□□ 1.87
PSMD3-204ENST00000540504 SETD1BQ9UPS6 1966 aaKnown RBP26.74■■□□□ 1.87
PSMD3-204ENST00000540504 TIAM1Q13009 1591 aa26.74■■□□□ 1.87
PSMD3-204ENST00000540504 ATP7AQ04656 1500 aa26.72■■□□□ 1.87
PSMD3-204ENST00000540504 CNTLNQ9NXG0 1405 aa26.71■■□□□ 1.87
PSMD3-204ENST00000540504 INO80Q9ULG1 1556 aaPredicted RBP26.7■■□□□ 1.86
PSMD3-204ENST00000540504 C3P01024 1663 aa26.69■■□□□ 1.86
PSMD3-204ENST00000540504 UHRF1BP1Q6BDS2 1440 aa26.67■■□□□ 1.86
PSMD3-204ENST00000540504 FBXO41Q8TF61 875 aa26.66■■□□□ 1.86
PSMD3-204ENST00000540504 SUPT6HQ7KZ85 1726 aaKnown RBP26.65■■□□□ 1.86
PSMD3-204ENST00000540504 PLXNC1O60486 1568 aa26.64■■□□□ 1.86
PSMD3-204ENST00000540504 A2MP01023 1474 aa26.64■■□□□ 1.86
PSMD3-204ENST00000540504 MBD5Q9P267 1494 aa26.63■■□□□ 1.85
PSMD3-204ENST00000540504 ZNF644Q9H582 1327 aaPredicted RBP26.63■■□□□ 1.85
PSMD3-204ENST00000540504 MROH2AA6NES4 1674 aa26.62■■□□□ 1.85
PSMD3-204ENST00000540504 VPS8Q8N3P4 1428 aa26.62■■□□□ 1.85
PSMD3-204ENST00000540504 NCOA2Q15596 1464 aa26.62■■□□□ 1.85
PSMD3-204ENST00000540504 ADGBQ8N7X0 1667 aa26.61■■□□□ 1.85
PSMD3-204ENST00000540504 LOC105371045A0A1W2PR82 267 aa26.61■■□□□ 1.85
PSMD3-204ENST00000540504 RTEL1-TNFRSF6BF6WH68 1400 aa26.6■■□□□ 1.85
PSMD3-204ENST00000540504 DMRT2Q9Y5R5 561 aa26.57■■□□□ 1.84
PSMD3-204ENST00000540504 RSPH4AQ5TD94 716 aa26.56■■□□□ 1.84
PSMD3-204ENST00000540504 NPATQ14207 1427 aa26.55■■□□□ 1.84
PSMD3-204ENST00000540504 PPP6R1Q9UPN7 881 aa26.54■■□□□ 1.84
PSMD3-204ENST00000540504 ZMYM3Q14202 1370 aa26.54■■□□□ 1.84
PSMD3-204ENST00000540504 STRCQ7RTU9 1775 aa26.53■■□□□ 1.84
PSMD3-204ENST00000540504 CAMSAP2Q08AD1 1489 aa26.53■■□□□ 1.84
PSMD3-204ENST00000540504 CCDC141Q6ZP82 1450 aa26.52■■□□□ 1.84
PSMD3-204ENST00000540504 LRRC9Q6ZRR7 1453 aa26.52■■□□□ 1.84
PSMD3-204ENST00000540504 MAP3K1Q13233 1512 aa26.51■■□□□ 1.83
PSMD3-204ENST00000540504 CLTCQ00610 1675 aaKnown RBP26.5■■□□□ 1.83
PSMD3-204ENST00000540504 GGT6Q6P531 493 aa26.5■■□□□ 1.83
PSMD3-204ENST00000540504 DHX29Q7Z478 1369 aaKnown RBP26.48■■□□□ 1.83
PSMD3-204ENST00000540504 ARHGEF5Q12774 1597 aa26.46■■□□□ 1.83
PSMD3-204ENST00000540504 CERKQ8TCT0 537 aa26.46■■□□□ 1.83
PSMD3-204ENST00000540504 PTPRTO14522 1441 aa26.44■■□□□ 1.82
PSMD3-204ENST00000540504 TSPY4P0CV99 314 aa26.42■■□□□ 1.82
PSMD3-204ENST00000540504 TSPY10P0CW01 314 aa26.42■■□□□ 1.82
PSMD3-204ENST00000540504 PTPRKQ15262 1439 aa26.4■■□□□ 1.82
PSMD3-204ENST00000540504 NCOA1Q15788 1441 aa26.39■■□□□ 1.82
PSMD3-204ENST00000540504 FAM135AQ9P2D6 1515 aa26.39■■□□□ 1.82
PSMD3-204ENST00000540504 KIF3BO15066 747 aa26.38■■□□□ 1.81
PSMD3-204ENST00000540504 KANK4Q5T7N3 995 aaPredicted RBP26.38■■□□□ 1.81
PSMD3-204ENST00000540504 MIA2Q96PC5 1412 aa26.38■■□□□ 1.81
PSMD3-204ENST00000540504 ZNF142P52746 1687 aaPredicted RBP26.37■■□□□ 1.81
PSMD3-204ENST00000540504 MYO3AQ8NEV4 1616 aa26.36■■□□□ 1.81
PSMD3-204ENST00000540504 CAMSAP1Q5T5Y3 1602 aa26.36■■□□□ 1.81
PSMD3-204ENST00000540504 MYOM3Q5VTT5 1437 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms