RNA–Protein interactions for RNA: ENST00000540373.1

CADM1-208, Transcript of cell adhesion molecule 1, humanhuman

TSL 2

Gene CADM1, Length 335 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-208ENST00000540373 AKNAQ7Z591 1439 aa13.86□□□□□ -0.19
CADM1-208ENST00000540373 RICTORQ6R327 1708 aa13.86□□□□□ -0.19
CADM1-208ENST00000540373 KDM4FA0A1W2PPD8 638 aa13.85□□□□□ -0.19
CADM1-208ENST00000540373 CDC42BPAQ5VT25 1732 aa13.84□□□□□ -0.19
CADM1-208ENST00000540373 CFAP74Q9C0B2 1584 aa13.83□□□□□ -0.2
CADM1-208ENST00000540373 PREX2Q70Z35 1606 aa13.81□□□□□ -0.2
CADM1-208ENST00000540373 DENND4BO75064 1496 aaPredicted RBP13.8□□□□□ -0.2
CADM1-208ENST00000540373 VPS8Q8N3P4 1428 aa13.8□□□□□ -0.2
CADM1-208ENST00000540373 EFCAB2Q5VUJ9 269 aa13.79□□□□□ -0.2
CADM1-208ENST00000540373 SCAPERQ9BY12 1400 aa13.79□□□□□ -0.2
CADM1-208ENST00000540373 ADGRL1O94910 1474 aa13.79□□□□□ -0.2
CADM1-208ENST00000540373 ARHGAP5Q13017 1502 aa13.79□□□□□ -0.2
CADM1-208ENST00000540373 SIGLEC1Q9BZZ2 1709 aa13.77□□□□□ -0.21
CADM1-208ENST00000540373 ARHGEF12Q9NZN5 1544 aa13.77□□□□□ -0.21
CADM1-208ENST00000540373 GPATCH8Q9UKJ3 1502 aaKnown RBP13.77□□□□□ -0.21
CADM1-208ENST00000540373 TIAM1Q13009 1591 aa13.76□□□□□ -0.21
CADM1-208ENST00000540373 ZMYM4Q5VZL5 1548 aa13.75□□□□□ -0.21
CADM1-208ENST00000540373 POGZQ7Z3K3 1410 aa13.75□□□□□ -0.21
CADM1-208ENST00000540373 MTUS2Q5JR59 1369 aa13.75□□□□□ -0.21
CADM1-208ENST00000540373 YEATS2Q9ULM3 1422 aa13.74□□□□□ -0.21
CADM1-208ENST00000540373 SAMD9LQ8IVG5 1584 aa13.74□□□□□ -0.21
CADM1-208ENST00000540373 EHBP1L1Q8N3D4 1523 aa13.74□□□□□ -0.21
CADM1-208ENST00000540373 ITSN2Q9NZM3 1697 aa13.73□□□□□ -0.21
CADM1-208ENST00000540373 AFAP1Q8N556 730 aa13.73□□□□□ -0.21
CADM1-208ENST00000540373 ABCC1P33527 1531 aa13.73□□□□□ -0.21
CADM1-208ENST00000540373 KANK4Q5T7N3 995 aaPredicted RBP13.72□□□□□ -0.21
CADM1-208ENST00000540373 ARHGEF40Q8TER5 1519 aa13.72□□□□□ -0.21
CADM1-208ENST00000540373 TRAPPC8Q9Y2L5 1435 aa13.72□□□□□ -0.21
CADM1-208ENST00000540373 KDM5CP41229 1560 aa13.71□□□□□ -0.22
CADM1-208ENST00000540373 ZFYVE16Q7Z3T8 1539 aa13.7□□□□□ -0.22
CADM1-208ENST00000540373 MAP3K1Q13233 1512 aa13.69□□□□□ -0.22
CADM1-208ENST00000540373 LRRC9Q6ZRR7 1453 aa13.69□□□□□ -0.22
CADM1-208ENST00000540373 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
CADM1-208ENST00000540373 SUPT6HQ7KZ85 1726 aaKnown RBP13.69□□□□□ -0.22
CADM1-208ENST00000540373 CCNB3Q8WWL7 1395 aa13.69□□□□□ -0.22
CADM1-208ENST00000540373 ADAMTSL3P82987 1691 aa13.69□□□□□ -0.22
CADM1-208ENST00000540373 NCOA2Q15596 1464 aa13.68□□□□□ -0.22
CADM1-208ENST00000540373 MAGI2Q86UL8 1455 aa13.68□□□□□ -0.22
CADM1-208ENST00000540373 ZNF644Q9H582 1327 aaPredicted RBP13.68□□□□□ -0.22
CADM1-208ENST00000540373 ZNF518AQ6AHZ1 1483 aa13.67□□□□□ -0.22
CADM1-208ENST00000540373 BCORL1Q5H9F3 1711 aa13.67□□□□□ -0.22
CADM1-208ENST00000540373 HNRNPMP52272 730 aaKnown RBP eCLIP13.67□□□□□ -0.22
CADM1-208ENST00000540373 CFDP1Q9UEE9 299 aaPredicted RBP13.67□□□□□ -0.22
CADM1-208ENST00000540373 SYCP2Q9BX26 1530 aa13.67□□□□□ -0.22
CADM1-208ENST00000540373 KIDINS220Q9ULH0 1771 aa13.67□□□□□ -0.22
CADM1-208ENST00000540373 ABCA6Q8N139 1617 aa13.65□□□□□ -0.22
CADM1-208ENST00000540373 MLH3Q9UHC1 1453 aa13.65□□□□□ -0.22
CADM1-208ENST00000540373 HECW2Q9P2P5 1572 aa13.65□□□□□ -0.22
CADM1-208ENST00000540373 DIP2CQ9Y2E4 1556 aa13.65□□□□□ -0.22
CADM1-208ENST00000540373 ATP10AO60312 1499 aa13.64□□□□□ -0.23
CADM1-208ENST00000540373 KIAA1107Q9UPP5 1409 aa13.64□□□□□ -0.23
CADM1-208ENST00000540373 MBD5Q9P267 1494 aa13.63□□□□□ -0.23
CADM1-208ENST00000540373 MADDQ8WXG6 1647 aa13.62□□□□□ -0.23
CADM1-208ENST00000540373 ARID4BQ4LE39 1312 aaPredicted RBP13.62□□□□□ -0.23
CADM1-208ENST00000540373 C9orf84Q5VXU9 1444 aa13.6□□□□□ -0.23
CADM1-208ENST00000540373 INO80Q9ULG1 1556 aaPredicted RBP13.59□□□□□ -0.23
CADM1-208ENST00000540373 PLEKHH2Q8IVE3 1493 aa13.59□□□□□ -0.23
CADM1-208ENST00000540373 REREQ9P2R6 1566 aa13.58□□□□□ -0.23
CADM1-208ENST00000540373 PTPRMP28827 1452 aa13.58□□□□□ -0.24
CADM1-208ENST00000540373 CAMSAP2Q08AD1 1489 aa13.58□□□□□ -0.24
CADM1-208ENST00000540373 RIMS1Q86UR5 1692 aaKnown RBP13.58□□□□□ -0.24
CADM1-208ENST00000540373 MLECQ14165 292 aa13.57□□□□□ -0.24
CADM1-208ENST00000540373 MYT1LQ9UL68 1186 aa13.57□□□□□ -0.24
CADM1-208ENST00000540373 SPAG9O60271 1321 aaKnown RBP13.57□□□□□ -0.24
CADM1-208ENST00000540373 ATP7AQ04656 1500 aa13.56□□□□□ -0.24
CADM1-208ENST00000540373 MYOM3Q5VTT5 1437 aa13.56□□□□□ -0.24
CADM1-208ENST00000540373 FER1L4A9Z1Z3 1794 aa13.55□□□□□ -0.24
CADM1-208ENST00000540373 POTEDQ86YR6 584 aa13.55□□□□□ -0.24
CADM1-208ENST00000540373 APLP2Q06481 763 aa13.54□□□□□ -0.24
CADM1-208ENST00000540373 AGLP35573 1532 aa13.54□□□□□ -0.24
CADM1-208ENST00000540373 ARHGEF5Q12774 1597 aa13.53□□□□□ -0.24
CADM1-208ENST00000540373 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
CADM1-208ENST00000540373 MIA2Q96PC5 1412 aa13.52□□□□□ -0.25
CADM1-208ENST00000540373 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
CADM1-208ENST00000540373 CCDC141Q6ZP82 1450 aa13.51□□□□□ -0.25
CADM1-208ENST00000540373 PTPN23Q9H3S7 1636 aa13.5□□□□□ -0.25
CADM1-208ENST00000540373 A2MP01023 1474 aa13.5□□□□□ -0.25
CADM1-208ENST00000540373 RTEL1-TNFRSF6BF6WH68 1400 aa13.5□□□□□ -0.25
CADM1-208ENST00000540373 CEBPAP49715 358 aaPredicted RBP13.48□□□□□ -0.25
CADM1-208ENST00000540373 RSPH4AQ5TD94 716 aa13.48□□□□□ -0.25
CADM1-208ENST00000540373 MAST1Q9Y2H9 1570 aa13.47□□□□□ -0.25
CADM1-208ENST00000540373 PPARGC1BQ86YN6 1023 aaKnown RBP13.47□□□□□ -0.25
CADM1-208ENST00000540373 TCOF1Q13428 1488 aaKnown RBP13.47□□□□□ -0.25
CADM1-208ENST00000540373 FGD6Q6ZV73 1430 aa13.47□□□□□ -0.25
CADM1-208ENST00000540373 C3P01024 1663 aa13.46□□□□□ -0.26
CADM1-208ENST00000540373 CROCC2H7BZ55 1655 aa13.45□□□□□ -0.26
CADM1-208ENST00000540373 ABCC5O15440 1437 aa13.45□□□□□ -0.26
CADM1-208ENST00000540373 DHX29Q7Z478 1369 aaKnown RBP13.45□□□□□ -0.26
CADM1-208ENST00000540373 DNMT1P26358 1616 aaKnown RBP13.43□□□□□ -0.26
CADM1-208ENST00000540373 TSPY4P0CV99 314 aa13.43□□□□□ -0.26
CADM1-208ENST00000540373 TSPY10P0CW01 314 aa13.43□□□□□ -0.26
CADM1-208ENST00000540373 CLTCQ00610 1675 aaKnown RBP13.43□□□□□ -0.26
CADM1-208ENST00000540373 LMTK3Q96Q04 1460 aa13.42□□□□□ -0.26
CADM1-208ENST00000540373 DAPK1P53355 1430 aa13.41□□□□□ -0.26
CADM1-208ENST00000540373 GGT6Q6P531 493 aa13.41□□□□□ -0.26
CADM1-208ENST00000540373 MROH2AA6NES4 1674 aa13.4□□□□□ -0.26
CADM1-208ENST00000540373 KIF3BO15066 747 aa13.39□□□□□ -0.27
CADM1-208ENST00000540373 MAPK8IP2Q13387 824 aaPredicted RBP13.39□□□□□ -0.27
CADM1-208ENST00000540373 SETD1BQ9UPS6 1966 aaKnown RBP13.38□□□□□ -0.27
CADM1-208ENST00000540373 SHANK2Q9UPX8 1470 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms