RNA–Protein interactions for RNA: ENST00000540373.1

CADM1-208, Transcript of cell adhesion molecule 1, humanhuman

TSL 2

Gene CADM1, Length 335 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-208ENST00000540373 NISCHQ9Y2I1 1504 aa21.22■□□□□ 0.99
CADM1-208ENST00000540373 AEBP2Q6ZN18 517 aaPredicted RBP19.54■□□□□ 0.72
CADM1-208ENST00000540373 CCDC180Q9P1Z9 1646 aa18.87■□□□□ 0.61
CADM1-208ENST00000540373 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
CADM1-208ENST00000540373 ABCC9O60706 1549 aa18.56■□□□□ 0.56
CADM1-208ENST00000540373 RB1CC1Q8TDY2 1594 aa17.78■□□□□ 0.44
CADM1-208ENST00000540373 NACADO15069 1562 aa17.74■□□□□ 0.43
CADM1-208ENST00000540373 DCAF8L2P0C7V8 631 aa17.73■□□□□ 0.43
CADM1-208ENST00000540373 ZCCHC6Q5VYS8 1495 aaKnown RBP17.65■□□□□ 0.42
CADM1-208ENST00000540373 MYO15BQ96JP2 1530 aa17.61■□□□□ 0.41
CADM1-208ENST00000540373 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.4
CADM1-208ENST00000540373 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.39
CADM1-208ENST00000540373 PABPN1Q86U42 306 aaKnown RBP eCLIP17.35■□□□□ 0.37
CADM1-208ENST00000540373 BICRAQ9NZM4 1560 aa17.35■□□□□ 0.37
CADM1-208ENST00000540373 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
CADM1-208ENST00000540373 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
CADM1-208ENST00000540373 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
CADM1-208ENST00000540373 EIF4G1Q04637 1599 aaKnown RBP16.83■□□□□ 0.28
CADM1-208ENST00000540373 CC2D2AQ9P2K1 1620 aa16.8■□□□□ 0.28
CADM1-208ENST00000540373 CECR2Q9BXF3 1484 aa16.66■□□□□ 0.26
CADM1-208ENST00000540373 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
CADM1-208ENST00000540373 SMARCA4P51532 1647 aa16.48■□□□□ 0.23
CADM1-208ENST00000540373 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
CADM1-208ENST00000540373 BAZ1AQ9NRL2 1556 aaPredicted RBP16.41■□□□□ 0.22
CADM1-208ENST00000540373 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
CADM1-208ENST00000540373 NCAPD3P42695 1498 aa16.4■□□□□ 0.22
CADM1-208ENST00000540373 MROH2BQ7Z745 1585 aa16.39■□□□□ 0.21
CADM1-208ENST00000540373 SMARCA2P51531 1590 aa16.33■□□□□ 0.2
CADM1-208ENST00000540373 PEG3Q9GZU2 1588 aa16.31■□□□□ 0.2
CADM1-208ENST00000540373 HMGXB3Q12766 1538 aa16.28■□□□□ 0.2
CADM1-208ENST00000540373 WIZO95785 1651 aa16.23■□□□□ 0.19
CADM1-208ENST00000540373 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
CADM1-208ENST00000540373 RSF1Q96T23 1441 aaPredicted RBP16.16■□□□□ 0.18
CADM1-208ENST00000540373 NESP48681 1621 aa16.08■□□□□ 0.17
CADM1-208ENST00000540373 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
CADM1-208ENST00000540373 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.14
CADM1-208ENST00000540373 ERCC6Q03468 1493 aa15.92■□□□□ 0.14
CADM1-208ENST00000540373 CADPSQ9ULU8 1353 aa15.9■□□□□ 0.14
CADM1-208ENST00000540373 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
CADM1-208ENST00000540373 CCDC88BA6NC98 1476 aa15.83■□□□□ 0.12
CADM1-208ENST00000540373 THOC2Q8NI27 1593 aaKnown RBP15.83■□□□□ 0.12
CADM1-208ENST00000540373 PDS5BQ9NTI5 1447 aa15.81■□□□□ 0.12
CADM1-208ENST00000540373 CFTRP13569 1480 aa15.8■□□□□ 0.12
CADM1-208ENST00000540373 CUX2O14529 1486 aa15.79■□□□□ 0.12
CADM1-208ENST00000540373 FANCD2Q9BXW9 1451 aa15.72■□□□□ 0.11
CADM1-208ENST00000540373 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
CADM1-208ENST00000540373 MRC2Q9UBG0 1479 aa15.68■□□□□ 0.1
CADM1-208ENST00000540373 CEP164Q9UPV0 1460 aa15.68■□□□□ 0.1
CADM1-208ENST00000540373 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
CADM1-208ENST00000540373 WDR62O43379 1518 aa15.66■□□□□ 0.1
CADM1-208ENST00000540373 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
CADM1-208ENST00000540373 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
CADM1-208ENST00000540373 DNAJC5Q9H3Z4 198 aa15.45■□□□□ 0.06
CADM1-208ENST00000540373 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
CADM1-208ENST00000540373 FOXD1Q16676 465 aa15.42■□□□□ 0.06
CADM1-208ENST00000540373 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
CADM1-208ENST00000540373 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
CADM1-208ENST00000540373 CUX1P39880 1505 aa15.37■□□□□ 0.05
CADM1-208ENST00000540373 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
CADM1-208ENST00000540373 IFT140Q96RY7 1462 aa15.35■□□□□ 0.05
CADM1-208ENST00000540373 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
CADM1-208ENST00000540373 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
CADM1-208ENST00000540373 FGD5Q6ZNL6 1462 aa15.3■□□□□ 0.04
CADM1-208ENST00000540373 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
CADM1-208ENST00000540373 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.03
CADM1-208ENST00000540373 SOGA1O94964 1423 aa15.26■□□□□ 0.03
CADM1-208ENST00000540373 SYNJ1O43426 1573 aa15.22■□□□□ 0.03
CADM1-208ENST00000540373 TDRD9Q8NDG6 1382 aaKnown RBP15.22■□□□□ 0.03
CADM1-208ENST00000540373 WDR97A6NE52 1622 aa15.21■□□□□ 0.03
CADM1-208ENST00000540373 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.03
CADM1-208ENST00000540373 TOP2BQ02880 1626 aa15.19■□□□□ 0.02
CADM1-208ENST00000540373 WRNQ14191 1432 aaPredicted RBP eCLIP15.18■□□□□ 0.02
CADM1-208ENST00000540373 OSCARQ8IYS5 282 aa15.14■□□□□ 0.01
CADM1-208ENST00000540373 CHD1O14646 1710 aa15.14■□□□□ 0.01
CADM1-208ENST00000540373 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
CADM1-208ENST00000540373 ABCA5Q8WWZ7 1642 aa15.11■□□□□ 0.01
CADM1-208ENST00000540373 PBRM1Q86U86 1689 aa15.1■□□□□ 0.01
CADM1-208ENST00000540373 GAPVD1Q14C86 1478 aa15.08■□□□□ 0.01
CADM1-208ENST00000540373 SNAPC4Q5SXM2 1469 aa15.08■□□□□ 0.01
CADM1-208ENST00000540373 GRIN2BQ13224 1484 aa15.07■□□□□ 0
CADM1-208ENST00000540373 MAGI1Q96QZ7 1491 aaPredicted RBP15.03■□□□□ -0
CADM1-208ENST00000540373 FBLN2P98095 1184 aa15.03■□□□□ -0
CADM1-208ENST00000540373 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
CADM1-208ENST00000540373 PLPPR3Q6T4P5 718 aa14.98□□□□□ -0.01
CADM1-208ENST00000540373 RIMBP3CA6NJZ7 1639 aa14.97□□□□□ -0.01
CADM1-208ENST00000540373 RIMBP3BA6NNM3 1639 aa14.97□□□□□ -0.01
CADM1-208ENST00000540373 RIMBP3Q9UFD9 1639 aa14.97□□□□□ -0.01
CADM1-208ENST00000540373 CHMP7Q8WUX9 453 aaPredicted RBP14.97□□□□□ -0.01
CADM1-208ENST00000540373 ADAMTS12P58397 1594 aa14.94□□□□□ -0.02
CADM1-208ENST00000540373 CLASP1Q7Z460 1538 aa14.94□□□□□ -0.02
CADM1-208ENST00000540373 ERICH3Q5RHP9 1530 aa14.93□□□□□ -0.02
CADM1-208ENST00000540373 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
CADM1-208ENST00000540373 GRIN2AQ12879 1464 aa14.9□□□□□ -0.02
CADM1-208ENST00000540373 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
CADM1-208ENST00000540373 FHAD1B1AJZ9 1412 aa14.89□□□□□ -0.03
CADM1-208ENST00000540373 CEP170Q5SW79 1584 aa14.87□□□□□ -0.03
CADM1-208ENST00000540373 IGF1RP08069 1367 aa14.86□□□□□ -0.03
CADM1-208ENST00000540373 NUP160Q12769 1436 aa14.84□□□□□ -0.03
CADM1-208ENST00000540373 KIF27Q86VH2 1401 aa14.84□□□□□ -0.03
CADM1-208ENST00000540373 RUSC2Q8N2Y8 1516 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms