RNA–Protein interactions for RNA: ENST00000540210.5

CCAR1-212, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 1 (best)

Gene CCAR1, Length 3,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-212ENST00000540210 POGZQ7Z3K3 1410 aa6.35□□□□□ -1.39
CCAR1-212ENST00000540210 PLEKHD1A6NEE1 506 aa6.35□□□□□ -1.39
CCAR1-212ENST00000540210 FAM135AQ9P2D6 1515 aa6.35□□□□□ -1.39
CCAR1-212ENST00000540210 PLEKHH2Q8IVE3 1493 aa6.35□□□□□ -1.39
CCAR1-212ENST00000540210 AKNAQ7Z591 1439 aa6.35□□□□□ -1.39
CCAR1-212ENST00000540210 ZFYVE16Q7Z3T8 1539 aa6.34□□□□□ -1.39
CCAR1-212ENST00000540210 HECW2Q9P2P5 1572 aa6.33□□□□□ -1.4
CCAR1-212ENST00000540210 AGLP35573 1532 aa6.33□□□□□ -1.4
CCAR1-212ENST00000540210 ADGRL1O94910 1474 aa6.33□□□□□ -1.4
CCAR1-212ENST00000540210 ZNF518AQ6AHZ1 1483 aa6.33□□□□□ -1.4
CCAR1-212ENST00000540210 MLH3Q9UHC1 1453 aa6.33□□□□□ -1.4
CCAR1-212ENST00000540210 CEP162Q5TB80 1403 aa6.33□□□□□ -1.4
CCAR1-212ENST00000540210 MSH5O43196 834 aa6.32□□□□□ -1.4
CCAR1-212ENST00000540210 KIAA1107Q9UPP5 1409 aa6.32□□□□□ -1.4
CCAR1-212ENST00000540210 UBTFP17480 764 aaKnown RBP6.32□□□□□ -1.4
CCAR1-212ENST00000540210 SUPT6HQ7KZ85 1726 aaKnown RBP6.31□□□□□ -1.4
CCAR1-212ENST00000540210 PLPPR3Q6T4P5 718 aa6.31□□□□□ -1.4
CCAR1-212ENST00000540210 TIAM1Q13009 1591 aa6.31□□□□□ -1.4
CCAR1-212ENST00000540210 INO80Q9ULG1 1556 aaPredicted RBP6.31□□□□□ -1.4
CCAR1-212ENST00000540210 FOXD1Q16676 465 aa6.31□□□□□ -1.4
CCAR1-212ENST00000540210 MROH2AA6NES4 1674 aa6.31□□□□□ -1.4
CCAR1-212ENST00000540210 APLP2Q06481 763 aa6.31□□□□□ -1.4
CCAR1-212ENST00000540210 ARHGEF12Q9NZN5 1544 aa6.31□□□□□ -1.4
CCAR1-212ENST00000540210 VPS8Q8N3P4 1428 aa6.3□□□□□ -1.4
CCAR1-212ENST00000540210 ARHGEF5Q12774 1597 aa6.3□□□□□ -1.4
CCAR1-212ENST00000540210 DIP2CQ9Y2E4 1556 aa6.3□□□□□ -1.4
CCAR1-212ENST00000540210 C9orf84Q5VXU9 1444 aa6.3□□□□□ -1.4
CCAR1-212ENST00000540210 SAMD9LQ8IVG5 1584 aa6.3□□□□□ -1.4
CCAR1-212ENST00000540210 ADGBQ8N7X0 1667 aa6.3□□□□□ -1.4
CCAR1-212ENST00000540210 ARHGAP5Q13017 1502 aa6.3□□□□□ -1.4
CCAR1-212ENST00000540210 PLXNC1O60486 1568 aa6.3□□□□□ -1.4
CCAR1-212ENST00000540210 MAST1Q9Y2H9 1570 aa6.3□□□□□ -1.4
CCAR1-212ENST00000540210 P3H3Q8IVL6 736 aa6.29□□□□□ -1.4
CCAR1-212ENST00000540210 ATP10AO60312 1499 aa6.29□□□□□ -1.4
CCAR1-212ENST00000540210 CACNB1Q02641 598 aaPredicted RBP6.29□□□□□ -1.4
CCAR1-212ENST00000540210 GPATCH8Q9UKJ3 1502 aaKnown RBP6.29□□□□□ -1.4
CCAR1-212ENST00000540210 ABCA6Q8N139 1617 aa6.28□□□□□ -1.4
CCAR1-212ENST00000540210 KIDINS220Q9ULH0 1771 aa6.28□□□□□ -1.4
CCAR1-212ENST00000540210 EFCAB2Q5VUJ9 269 aa6.28□□□□□ -1.4
CCAR1-212ENST00000540210 RTEL1-TNFRSF6BF6WH68 1400 aa6.28□□□□□ -1.4
CCAR1-212ENST00000540210 FER1L4A9Z1Z3 1794 aa6.27□□□□□ -1.41
CCAR1-212ENST00000540210 SIGLEC1Q9BZZ2 1709 aa6.27□□□□□ -1.41
CCAR1-212ENST00000540210 TTBK1Q5TCY1 1321 aaPredicted RBP6.27□□□□□ -1.41
CCAR1-212ENST00000540210 SCAPERQ9BY12 1400 aa6.27□□□□□ -1.41
CCAR1-212ENST00000540210 KDM4FA0A1W2PPD8 638 aa6.27□□□□□ -1.41
CCAR1-212ENST00000540210 MADDQ8WXG6 1647 aa6.27□□□□□ -1.41
CCAR1-212ENST00000540210 KCNH8Q96L42 1107 aa6.27□□□□□ -1.41
CCAR1-212ENST00000540210 EIF2AK4Q9P2K8 1649 aaKnown RBP6.26□□□□□ -1.41
CCAR1-212ENST00000540210 ATP7AQ04656 1500 aa6.25□□□□□ -1.41
CCAR1-212ENST00000540210 MIA2Q96PC5 1412 aa6.25□□□□□ -1.41
CCAR1-212ENST00000540210 CROCC2H7BZ55 1655 aa6.25□□□□□ -1.41
CCAR1-212ENST00000540210 LRRC9Q6ZRR7 1453 aa6.25□□□□□ -1.41
CCAR1-212ENST00000540210 POTEHQ6S545 545 aa6.25□□□□□ -1.41
CCAR1-212ENST00000540210 CNTLNQ9NXG0 1405 aa6.25□□□□□ -1.41
CCAR1-212ENST00000540210 SYCP2Q9BX26 1530 aa6.24□□□□□ -1.41
CCAR1-212ENST00000540210 PTPRMP28827 1452 aa6.24□□□□□ -1.41
CCAR1-212ENST00000540210 SHANK2Q9UPX8 1470 aa6.24□□□□□ -1.41
CCAR1-212ENST00000540210 RIMS1Q86UR5 1692 aaKnown RBP6.24□□□□□ -1.41
CCAR1-212ENST00000540210 PREX1Q8TCU6 1659 aa6.24□□□□□ -1.41
CCAR1-212ENST00000540210 EHMT2Q96KQ7 1210 aa6.24□□□□□ -1.41
CCAR1-212ENST00000540210 ZC3H13Q5T200 1668 aaKnown RBP6.24□□□□□ -1.41
CCAR1-212ENST00000540210 MBD5Q9P267 1494 aa6.24□□□□□ -1.41
CCAR1-212ENST00000540210 RNF17Q9BXT8 1623 aaKnown RBP6.24□□□□□ -1.41
CCAR1-212ENST00000540210 NCOA2Q15596 1464 aa6.23□□□□□ -1.41
CCAR1-212ENST00000540210 MTUS2Q5JR59 1369 aa6.23□□□□□ -1.41
CCAR1-212ENST00000540210 TCOF1Q13428 1488 aaKnown RBP6.23□□□□□ -1.41
CCAR1-212ENST00000540210 YEATS2Q9ULM3 1422 aa6.23□□□□□ -1.41
CCAR1-212ENST00000540210 ZNF142P52746 1687 aaPredicted RBP6.23□□□□□ -1.41
CCAR1-212ENST00000540210 CCNB3Q8WWL7 1395 aa6.23□□□□□ -1.41
CCAR1-212ENST00000540210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.22□□□□□ -1.41
CCAR1-212ENST00000540210 HNRNPUL2Q1KMD3 747 aaKnown RBP6.22□□□□□ -1.41
CCAR1-212ENST00000540210 RSPH4AQ5TD94 716 aa6.22□□□□□ -1.41
CCAR1-212ENST00000540210 CCDC141Q6ZP82 1450 aa6.22□□□□□ -1.41
CCAR1-212ENST00000540210 PPP6R1Q9UPN7 881 aa6.22□□□□□ -1.41
CCAR1-212ENST00000540210 CAMSAP2Q08AD1 1489 aa6.22□□□□□ -1.41
CCAR1-212ENST00000540210 RTN4Q9NQC3 1192 aaKnown RBP6.22□□□□□ -1.41
CCAR1-212ENST00000540210 KDM5DQ9BY66 1539 aa6.22□□□□□ -1.41
CCAR1-212ENST00000540210 TRAPPC8Q9Y2L5 1435 aa6.22□□□□□ -1.41
CCAR1-212ENST00000540210 NPATQ14207 1427 aa6.21□□□□□ -1.42
CCAR1-212ENST00000540210 NCBP3Q53F19 620 aaKnown RBP6.21□□□□□ -1.42
CCAR1-212ENST00000540210 C3P01024 1663 aa6.2□□□□□ -1.42
CCAR1-212ENST00000540210 MYOM3Q5VTT5 1437 aa6.2□□□□□ -1.42
CCAR1-212ENST00000540210 DNMT1P26358 1616 aaKnown RBP6.2□□□□□ -1.42
CCAR1-212ENST00000540210 RAPGEF3O95398 923 aa6.19□□□□□ -1.42
CCAR1-212ENST00000540210 A2MP01023 1474 aa6.19□□□□□ -1.42
CCAR1-212ENST00000540210 DEPDC5O75140 1603 aa6.19□□□□□ -1.42
CCAR1-212ENST00000540210 LMTK3Q96Q04 1460 aa6.18□□□□□ -1.42
CCAR1-212ENST00000540210 SETD1BQ9UPS6 1966 aaKnown RBP6.18□□□□□ -1.42
CCAR1-212ENST00000540210 PTPN23Q9H3S7 1636 aa6.18□□□□□ -1.42
CCAR1-212ENST00000540210 ARID3CA6NKF2 412 aa6.18□□□□□ -1.42
CCAR1-212ENST00000540210 ADGRL2O95490 1459 aa6.18□□□□□ -1.42
CCAR1-212ENST00000540210 KDM5AP29375 1690 aaKnown RBP6.17□□□□□ -1.42
CCAR1-212ENST00000540210 DUOX2Q9NRD8 1548 aa6.17□□□□□ -1.42
CCAR1-212ENST00000540210 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.17□□□□□ -1.42
CCAR1-212ENST00000540210 MYT1Q01538 1121 aa6.17□□□□□ -1.42
CCAR1-212ENST00000540210 PRDM15P57071 1507 aaPredicted RBP6.17□□□□□ -1.42
CCAR1-212ENST00000540210 DHX29Q7Z478 1369 aaKnown RBP6.16□□□□□ -1.42
CCAR1-212ENST00000540210 CFDP1Q9UEE9 299 aaPredicted RBP6.16□□□□□ -1.42
CCAR1-212ENST00000540210 LMTK2Q8IWU2 1503 aa6.16□□□□□ -1.42
CCAR1-212ENST00000540210 ERBINQ96RT1 1412 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms