RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 MMRN1Q13201 1228 aa12.23□□□□□ -0.45
MRE11-209ENST00000540013 COLQQ9Y215 455 aaPredicted RBP12.23□□□□□ -0.45
MRE11-209ENST00000540013 BOLA1Q9Y3E2 137 aa12.22□□□□□ -0.45
MRE11-209ENST00000540013 VSIG10Q8N0Z9 540 aa12.21□□□□□ -0.45
MRE11-209ENST00000540013 TSHZ2Q9NRE2 1034 aa12.21□□□□□ -0.45
MRE11-209ENST00000540013 DPY19L2Q6NUT2 758 aa12.2□□□□□ -0.46
MRE11-209ENST00000540013 MICALL2Q8IY33 904 aa12.18□□□□□ -0.46
MRE11-209ENST00000540013 SPNS2Q8IVW8 549 aa12.16□□□□□ -0.46
MRE11-209ENST00000540013 TMEM121BQ9BXQ6 578 aaPredicted RBP12.16□□□□□ -0.46
MRE11-209ENST00000540013 ST18O60284 1047 aa12.14□□□□□ -0.47
MRE11-209ENST00000540013 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
MRE11-209ENST00000540013 PDE4AP27815 886 aa12.11□□□□□ -0.47
MRE11-209ENST00000540013 WDR70Q9NW82 654 aa12.09□□□□□ -0.47
MRE11-209ENST00000540013 CADPS2Q86UW7 1296 aa12.07□□□□□ -0.48
MRE11-209ENST00000540013 TMC2Q8TDI7 906 aa12.07□□□□□ -0.48
MRE11-209ENST00000540013 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.07□□□□□ -0.48
MRE11-209ENST00000540013 SLAIN1Q8ND83 568 aa12.06□□□□□ -0.48
MRE11-209ENST00000540013 CRISPLD2Q9H0B8 497 aa12.05□□□□□ -0.48
MRE11-209ENST00000540013 GPHNQ9NQX3 736 aaPredicted RBP12.03□□□□□ -0.48
MRE11-209ENST00000540013 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.49
MRE11-209ENST00000540013 DDX27Q96GQ7 796 aaKnown RBP12.01□□□□□ -0.49
MRE11-209ENST00000540013 LARP6Q9BRS8 491 aaKnown RBP12.01□□□□□ -0.49
MRE11-209ENST00000540013 NCKAP5LQ9HCH0 1330 aa12.01□□□□□ -0.49
MRE11-209ENST00000540013 MFSD10Q14728 455 aa11.99□□□□□ -0.49
MRE11-209ENST00000540013 P3H3Q8IVL6 736 aa11.98□□□□□ -0.49
MRE11-209ENST00000540013 C2orf72A6NCS6 295 aa11.96□□□□□ -0.49
MRE11-209ENST00000540013 KIF3CO14782 793 aa11.96□□□□□ -0.49
MRE11-209ENST00000540013 FOXK1P85037 733 aa11.96□□□□□ -0.49
MRE11-209ENST00000540013 PPP1R15BQ5SWA1 713 aa11.95□□□□□ -0.5
MRE11-209ENST00000540013 E2F4Q16254 413 aa11.91□□□□□ -0.5
MRE11-209ENST00000540013 TMEM92Q6UXU6 159 aa11.91□□□□□ -0.5
MRE11-209ENST00000540013 DSG2Q14126 1118 aa11.9□□□□□ -0.5
MRE11-209ENST00000540013 PLPP6Q8IY26 295 aa11.88□□□□□ -0.51
MRE11-209ENST00000540013 MARVELD3Q96A59 401 aa11.88□□□□□ -0.51
MRE11-209ENST00000540013 CAMK2BQ13554 666 aa11.86□□□□□ -0.51
MRE11-209ENST00000540013 SNPHO15079 494 aa11.82□□□□□ -0.52
MRE11-209ENST00000540013 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
MRE11-209ENST00000540013 DOK7Q18PE1 504 aa11.81□□□□□ -0.52
MRE11-209ENST00000540013 KCNV2Q8TDN2 545 aa11.81□□□□□ -0.52
MRE11-209ENST00000540013 ARIH1Q9Y4X5 557 aaPredicted RBP11.81□□□□□ -0.52
MRE11-209ENST00000540013 SLC34A2O95436 690 aa11.8□□□□□ -0.52
MRE11-209ENST00000540013 RIMBP2O15034 1052 aa11.79□□□□□ -0.52
MRE11-209ENST00000540013 TBC1D12O60347 775 aa11.79□□□□□ -0.52
MRE11-209ENST00000540013 NBR1Q14596 966 aa11.77□□□□□ -0.53
MRE11-209ENST00000540013 BCANQ96GW7 911 aa11.76□□□□□ -0.53
MRE11-209ENST00000540013 ZNF316A6NFI3 1004 aaPredicted RBP11.74□□□□□ -0.53
MRE11-209ENST00000540013 MAP3K9P80192 1104 aa11.74□□□□□ -0.53
MRE11-209ENST00000540013 PTCD2Q8WV60 388 aaKnown RBP11.74□□□□□ -0.53
MRE11-209ENST00000540013 ZSWIM6Q9HCJ5 1215 aa11.74□□□□□ -0.53
MRE11-209ENST00000540013 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
MRE11-209ENST00000540013 EMILIN3Q9NT22 766 aa11.73□□□□□ -0.53
MRE11-209ENST00000540013 SPDYE16A6NNV3 312 aaPredicted RBP11.72□□□□□ -0.53
MRE11-209ENST00000540013 PRKCSHP14314 528 aaPredicted RBP11.72□□□□□ -0.53
MRE11-209ENST00000540013 ZNF710Q8N1W2 664 aa11.72□□□□□ -0.53
MRE11-209ENST00000540013 EMP3P54852 163 aa11.71□□□□□ -0.53
MRE11-209ENST00000540013 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
MRE11-209ENST00000540013 KRTAP3-2Q9BYR7 98 aa11.71□□□□□ -0.53
MRE11-209ENST00000540013 UPF1Q92900 1129 aaKnown RBP eCLIP11.7□□□□□ -0.54
MRE11-209ENST00000540013 DPYSL4O14531 572 aa11.69□□□□□ -0.54
MRE11-209ENST00000540013 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
MRE11-209ENST00000540013 PDIA6Q15084 440 aa11.67□□□□□ -0.54
MRE11-209ENST00000540013 DAXXQ9UER7 740 aaPredicted RBP11.67□□□□□ -0.54
MRE11-209ENST00000540013 PCDHGA4Q9Y5G9 962 aa11.67□□□□□ -0.54
MRE11-209ENST00000540013 NISCHQ9Y2I1 1504 aa11.66□□□□□ -0.54
MRE11-209ENST00000540013 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
MRE11-209ENST00000540013 HS3ST6Q96QI5 342 aa11.64□□□□□ -0.55
MRE11-209ENST00000540013 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
MRE11-209ENST00000540013 POTEBQ6S5H4 581 aa11.63□□□□□ -0.55
MRE11-209ENST00000540013 SMYD5Q6GMV2 418 aa11.62□□□□□ -0.55
MRE11-209ENST00000540013 FAM205CA6NFA0 338 aa11.61□□□□□ -0.55
MRE11-209ENST00000540013 EVI5O60447 810 aa11.61□□□□□ -0.55
MRE11-209ENST00000540013 GPR153Q6NV75 609 aa11.59□□□□□ -0.55
MRE11-209ENST00000540013 ARSIQ5FYB1 569 aa11.58□□□□□ -0.56
MRE11-209ENST00000540013 ANO8Q9HCE9 1232 aaPredicted RBP11.58□□□□□ -0.56
MRE11-209ENST00000540013 HOXB1P14653 301 aaPredicted RBP11.57□□□□□ -0.56
MRE11-209ENST00000540013 PTGER2P43116 358 aa11.57□□□□□ -0.56
MRE11-209ENST00000540013 SEMA3EO15041 775 aa11.56□□□□□ -0.56
MRE11-209ENST00000540013 TESPA1A2RU30 521 aaPredicted RBP11.55□□□□□ -0.56
MRE11-209ENST00000540013 PSDA5PKW4 1024 aaPredicted RBP11.55□□□□□ -0.56
MRE11-209ENST00000540013 NUDT7P0C024 238 aa11.54□□□□□ -0.56
MRE11-209ENST00000540013 KDM4FA0A1W2PPD8 638 aa11.52□□□□□ -0.57
MRE11-209ENST00000540013 PHF14O94880 888 aa11.5□□□□□ -0.57
MRE11-209ENST00000540013 EPAS1Q99814 870 aa11.5□□□□□ -0.57
MRE11-209ENST00000540013 RNF166Q96A37 237 aaPredicted RBP11.49□□□□□ -0.57
MRE11-209ENST00000540013 JPH4Q96JJ6 628 aa11.49□□□□□ -0.57
MRE11-209ENST00000540013 KHSRPQ92945 711 aaKnown RBP eCLIP11.48□□□□□ -0.571e-9■□□□□ 10
MRE11-209ENST00000540013 GRXCR2A6NFK2 248 aa11.47□□□□□ -0.57
MRE11-209ENST00000540013 DDX12PQ92771 950 aa11.47□□□□□ -0.57
MRE11-209ENST00000540013 FBXW7Q969H0 707 aa11.47□□□□□ -0.57
MRE11-209ENST00000540013 MLLT3P42568 568 aaPredicted RBP11.46□□□□□ -0.57
MRE11-209ENST00000540013 PPP4R3BQ5MIZ7 849 aa11.45□□□□□ -0.58
MRE11-209ENST00000540013 LHX6Q9UPM6 363 aa11.45□□□□□ -0.58
MRE11-209ENST00000540013 FOSBP53539 338 aa11.44□□□□□ -0.58
MRE11-209ENST00000540013 TYW1BQ6NUM6 668 aa11.44□□□□□ -0.58
MRE11-209ENST00000540013 ZNF454Q8N9F8 522 aa11.43□□□□□ -0.58
MRE11-209ENST00000540013 ARXQ96QS3 562 aa11.43□□□□□ -0.58
MRE11-209ENST00000540013 ERBB3P21860 1342 aa11.42□□□□□ -0.58
MRE11-209ENST00000540013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.42□□□□□ -0.58
MRE11-209ENST00000540013 TPRNQ4KMQ1 711 aa11.41□□□□□ -0.58
MRE11-209ENST00000540013 ZDHHC16Q969W1 377 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms