RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 CANXP27824 592 aaKnown RBP8.06□□□□□ -1.12
SNHG1-211ENST00000539921 HOMEZQ8IX15 550 aa8.06□□□□□ -1.12
SNHG1-211ENST00000539921 NAP1L5Q96NT1 182 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-211ENST00000539921 NAP1L2Q9ULW6 460 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-211ENST00000539921 MAPKBP1O60336 1514 aa8.06□□□□□ -1.12
SNHG1-211ENST00000539921 PROM2Q8N271 834 aa8.05□□□□□ -1.12
SNHG1-211ENST00000539921 TRIM52Q96A61 297 aa8.05□□□□□ -1.12
SNHG1-211ENST00000539921 CLIP1P30622 1438 aa8.04□□□□□ -1.12
SNHG1-211ENST00000539921 CHRM1P11229 460 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-211ENST00000539921 ANP32BQ92688 251 aaKnown RBP8.04□□□□□ -1.12
SNHG1-211ENST00000539921 KIF20AO95235 890 aa8.03□□□□□ -1.12
SNHG1-211ENST00000539921 BACH2Q9BYV9 841 aa8.03□□□□□ -1.12
SNHG1-211ENST00000539921 RRAGDQ9NQL2 400 aaPredicted RBP8.03□□□□□ -1.12
SNHG1-211ENST00000539921 BCCIPQ9P287 314 aaKnown RBP eCLIP8.03□□□□□ -1.12
SNHG1-211ENST00000539921 NCOA2Q15596 1464 aa8.02□□□□□ -1.13
SNHG1-211ENST00000539921 GTF2E1P29083 439 aaPredicted RBP8.02□□□□□ -1.13
SNHG1-211ENST00000539921 HNRNPUQ00839 825 aaKnown RBP eCLIP8.02□□□□□ -1.13
SNHG1-211ENST00000539921 TEX2Q8IWB9 1127 aa8.02□□□□□ -1.13
SNHG1-211ENST00000539921 CCDC144AA2RUR9 1427 aa8.02□□□□□ -1.13
SNHG1-211ENST00000539921 GOLGA6L3A6NEY3 463 aa8.01□□□□□ -1.13
SNHG1-211ENST00000539921 B4GALNT3Q6L9W6 998 aa8.01□□□□□ -1.13
SNHG1-211ENST00000539921 BBXQ8WY36 941 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-211ENST00000539921 DDX10Q13206 875 aaKnown RBP8□□□□□ -1.13
SNHG1-211ENST00000539921 DCAF11Q8TEB1 546 aa8□□□□□ -1.13
SNHG1-211ENST00000539921 STAC3Q96MF2 364 aa8□□□□□ -1.13
SNHG1-211ENST00000539921 ZBTB12Q9Y330 459 aaPredicted RBP8□□□□□ -1.13
SNHG1-211ENST00000539921 FHAD1B1AJZ9 1412 aa8□□□□□ -1.13
SNHG1-211ENST00000539921 WDR97A6NE52 1622 aa8□□□□□ -1.13
SNHG1-211ENST00000539921 VASPP50552 380 aaPredicted RBP7.99□□□□□ -1.13
SNHG1-211ENST00000539921 SLC20A2Q08357 652 aa7.99□□□□□ -1.13
SNHG1-211ENST00000539921 PHLDB1Q86UU1 1377 aa7.98□□□□□ -1.13
SNHG1-211ENST00000539921 BAZ1AQ9NRL2 1556 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-211ENST00000539921 DSG3P32926 999 aa7.98□□□□□ -1.13
SNHG1-211ENST00000539921 TNNT2P45379 298 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-211ENST00000539921 FTSJ3Q8IY81 847 aaKnown RBP7.98□□□□□ -1.13
SNHG1-211ENST00000539921 LAS1LQ9Y4W2 734 aaKnown RBP7.98□□□□□ -1.13
SNHG1-211ENST00000539921 FSD2A1L4K1 749 aa7.97□□□□□ -1.13
SNHG1-211ENST00000539921 PDE4AP27815 886 aa7.97□□□□□ -1.13
SNHG1-211ENST00000539921 ARID3AQ99856 593 aa7.97□□□□□ -1.13
SNHG1-211ENST00000539921 GTPBP4Q9BZE4 634 aaKnown RBP7.97□□□□□ -1.13
SNHG1-211ENST00000539921 ABCA5Q8WWZ7 1642 aa7.96□□□□□ -1.13
SNHG1-211ENST00000539921 SCAPERQ9BY12 1400 aa7.96□□□□□ -1.13
SNHG1-211ENST00000539921 DMTNQ08495 405 aa7.96□□□□□ -1.14
SNHG1-211ENST00000539921 MAP3K1Q13233 1512 aa7.96□□□□□ -1.14
SNHG1-211ENST00000539921 CCDC88BA6NC98 1476 aa7.95□□□□□ -1.14
SNHG1-211ENST00000539921 LETM1O95202 739 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-211ENST00000539921 TRIM44Q96DX7 344 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-211ENST00000539921 RGS3P49796 1198 aa7.94□□□□□ -1.14
SNHG1-211ENST00000539921 HAP1P54257 671 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-211ENST00000539921 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-211ENST00000539921 NUDCQ9Y266 331 aa7.94□□□□□ -1.14
SNHG1-211ENST00000539921 CNTLNQ9NXG0 1405 aa7.94□□□□□ -1.14
SNHG1-211ENST00000539921 ERICH3Q5RHP9 1530 aa7.93□□□□□ -1.14
SNHG1-211ENST00000539921 ESPNB1AK53 854 aa7.93□□□□□ -1.14
SNHG1-211ENST00000539921 MRE11P49959 708 aa7.93□□□□□ -1.14
SNHG1-211ENST00000539921 OSCARQ8IYS5 282 aa7.93□□□□□ -1.14
SNHG1-211ENST00000539921 HSP90B1P14625 803 aaKnown RBP7.92□□□□□ -1.14
SNHG1-211ENST00000539921 IFNLR1Q8IU57 520 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-211ENST00000539921 CCNB3Q8WWL7 1395 aa7.92□□□□□ -1.14
SNHG1-211ENST00000539921 IRX6P78412 446 aaPredicted RBP7.91□□□□□ -1.14
SNHG1-211ENST00000539921 SYNJ1O43426 1573 aa7.9□□□□□ -1.14
SNHG1-211ENST00000539921 ZMYM4Q5VZL5 1548 aa7.9□□□□□ -1.14
SNHG1-211ENST00000539921 SETD5Q9C0A6 1442 aa7.9□□□□□ -1.14
SNHG1-211ENST00000539921 PLCB2Q00722 1185 aa7.9□□□□□ -1.14
SNHG1-211ENST00000539921 HS1BP3Q53T59 392 aa7.9□□□□□ -1.14
SNHG1-211ENST00000539921 ZNF692Q9BU19 519 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-211ENST00000539921 UNC13AQ9UPW8 1703 aa7.89□□□□□ -1.15
SNHG1-211ENST00000539921 ABCC8Q09428 1581 aa7.89□□□□□ -1.15
SNHG1-211ENST00000539921 INSRP06213 1382 aa7.89□□□□□ -1.15
SNHG1-211ENST00000539921 ZMYM3Q14202 1370 aa7.89□□□□□ -1.15
SNHG1-211ENST00000539921 RAB3GAP2Q9H2M9 1393 aa7.89□□□□□ -1.15
SNHG1-211ENST00000539921 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.89□□□□□ -1.157e-33■□□□□ 8.4
SNHG1-211ENST00000539921 DYNC1I1O14576 645 aa7.89□□□□□ -1.15
SNHG1-211ENST00000539921 OFD1O75665 1012 aa7.89□□□□□ -1.15
SNHG1-211ENST00000539921 CHMP4BQ9H444 224 aaKnown RBP7.89□□□□□ -1.15
SNHG1-211ENST00000539921 TMEM51Q9NW97 253 aa7.89□□□□□ -1.15
SNHG1-211ENST00000539921 PPP4R3BQ5MIZ7 849 aa7.88□□□□□ -1.15
SNHG1-211ENST00000539921 AXDND1Q5T1B0 1012 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-211ENST00000539921 POLR1AO95602 1720 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-211ENST00000539921 PTMSP20962 102 aa7.87□□□□□ -1.15
SNHG1-211ENST00000539921 MMP14P50281 582 aa7.87□□□□□ -1.15
SNHG1-211ENST00000539921 PAXIP1Q6ZW49 1069 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-211ENST00000539921 IBTKQ9P2D0 1353 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-211ENST00000539921 CLGNO14967 610 aa7.86□□□□□ -1.15
SNHG1-211ENST00000539921 FRAT2O75474 233 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-211ENST00000539921 XRCC6P12956 609 aaKnown RBP eCLIP7.86□□□□□ -1.15
SNHG1-211ENST00000539921 CCDC94Q9BW85 323 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-211ENST00000539921 TSPYL1Q9H0U9 437 aa7.86□□□□□ -1.15
SNHG1-211ENST00000539921 MYH16Q9H6N6 1097 aa7.86□□□□□ -1.15
SNHG1-211ENST00000539921 YY1AP1Q9H869 796 aa7.86□□□□□ -1.15
SNHG1-211ENST00000539921 VIRMAQ69YN4 1812 aaKnown RBP7.85□□□□□ -1.15
SNHG1-211ENST00000539921 ZSCAN20P17040 1043 aaPredicted RBP7.85□□□□□ -1.15
SNHG1-211ENST00000539921 KIAA1211Q6ZU35 1233 aa7.85□□□□□ -1.15
SNHG1-211ENST00000539921 SOGA1O94964 1423 aa7.85□□□□□ -1.15
SNHG1-211ENST00000539921 MCM5P33992 734 aa7.84□□□□□ -1.15
SNHG1-211ENST00000539921 FAM193AP78312 1265 aa7.84□□□□□ -1.15
SNHG1-211ENST00000539921 BECN1Q14457 450 aa7.84□□□□□ -1.15
SNHG1-211ENST00000539921 CSPP1Q1MSJ5 1256 aa7.84□□□□□ -1.15
SNHG1-211ENST00000539921 ZFP91Q96JP5 570 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-211ENST00000539921 KTN1Q86UP2 1357 aaKnown RBP7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms