RNA–Protein interactions for RNA: ENST00000539735.5

COPS7A-210, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-210ENST00000539735 ITGAEP38570 1179 aa26.99■■□□□ 1.91
COPS7A-210ENST00000539735 EFCAB2Q5VUJ9 269 aa26.99■■□□□ 1.91
COPS7A-210ENST00000539735 NEO1Q92859 1461 aa26.96■■□□□ 1.91
COPS7A-210ENST00000539735 DIEXFQ68CQ4 756 aaKnown RBP26.95■■□□□ 1.91
COPS7A-210ENST00000539735 FAM50AQ14320 339 aaKnown RBP26.94■■□□□ 1.9
COPS7A-210ENST00000539735 KDM6BO15054 1643 aa26.94■■□□□ 1.9
COPS7A-210ENST00000539735 COL17A1Q9UMD9 1497 aaPredicted RBP26.93■■□□□ 1.9
COPS7A-210ENST00000539735 ARHGAP5Q13017 1502 aa26.93■■□□□ 1.9
COPS7A-210ENST00000539735 AKNAQ7Z591 1439 aa26.93■■□□□ 1.9
COPS7A-210ENST00000539735 NCOA2Q15596 1464 aa26.93■■□□□ 1.9
COPS7A-210ENST00000539735 ZNF316A6NFI3 1004 aaPredicted RBP26.93■■□□□ 1.9
COPS7A-210ENST00000539735 CFDP1Q9UEE9 299 aaPredicted RBP26.92■■□□□ 1.9
COPS7A-210ENST00000539735 ZNF777Q9ULD5 760 aaPredicted RBP26.92■■□□□ 1.9
COPS7A-210ENST00000539735 GPATCH8Q9UKJ3 1502 aaKnown RBP26.92■■□□□ 1.9
COPS7A-210ENST00000539735 MYO5CQ9NQX4 1742 aa26.9■■□□□ 1.9
COPS7A-210ENST00000539735 SUPT6HQ7KZ85 1726 aaKnown RBP26.9■■□□□ 1.9
COPS7A-210ENST00000539735 ARAP3Q8WWN8 1544 aa26.9■■□□□ 1.9
COPS7A-210ENST00000539735 DHX57Q6P158 1386 aaKnown RBP26.88■■□□□ 1.89
COPS7A-210ENST00000539735 RAPGEF3O95398 923 aa26.88■■□□□ 1.89
COPS7A-210ENST00000539735 FGD6Q6ZV73 1430 aa26.85■■□□□ 1.89
COPS7A-210ENST00000539735 ADGRL1O94910 1474 aa26.85■■□□□ 1.89
COPS7A-210ENST00000539735 CFAP74Q9C0B2 1584 aa26.85■■□□□ 1.89
COPS7A-210ENST00000539735 PREX2Q70Z35 1606 aa26.84■■□□□ 1.89
COPS7A-210ENST00000539735 SCAPERQ9BY12 1400 aa26.84■■□□□ 1.89
COPS7A-210ENST00000539735 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.81■■□□□ 1.88
COPS7A-210ENST00000539735 DENND4BO75064 1496 aaPredicted RBP26.81■■□□□ 1.88
COPS7A-210ENST00000539735 CDC42BPAQ5VT25 1732 aa26.81■■□□□ 1.88
COPS7A-210ENST00000539735 CDC42BPBQ9Y5S2 1711 aa26.81■■□□□ 1.88
COPS7A-210ENST00000539735 MYOM3Q5VTT5 1437 aa26.81■■□□□ 1.88
COPS7A-210ENST00000539735 ZNF644Q9H582 1327 aaPredicted RBP26.78■■□□□ 1.88
COPS7A-210ENST00000539735 HNRNPMP52272 730 aaKnown RBP eCLIP26.74■■□□□ 1.87
COPS7A-210ENST00000539735 AFAP1Q8N556 730 aa26.74■■□□□ 1.87
COPS7A-210ENST00000539735 ITSN2Q9NZM3 1697 aa26.72■■□□□ 1.87
COPS7A-210ENST00000539735 POGZQ7Z3K3 1410 aa26.72■■□□□ 1.87
COPS7A-210ENST00000539735 RAB3GAP2Q9H2M9 1393 aa26.71■■□□□ 1.87
COPS7A-210ENST00000539735 SETD5Q9C0A6 1442 aa26.7■■□□□ 1.87
COPS7A-210ENST00000539735 SAMD9LQ8IVG5 1584 aa26.7■■□□□ 1.86
COPS7A-210ENST00000539735 ARHGEF12Q9NZN5 1544 aa26.7■■□□□ 1.86
COPS7A-210ENST00000539735 ABCC1P33527 1531 aa26.69■■□□□ 1.86
COPS7A-210ENST00000539735 PLEKHH2Q8IVE3 1493 aa26.69■■□□□ 1.86
COPS7A-210ENST00000539735 MYT1LQ9UL68 1186 aa26.69■■□□□ 1.86
COPS7A-210ENST00000539735 PTPN23Q9H3S7 1636 aa26.68■■□□□ 1.86
COPS7A-210ENST00000539735 KIAA1107Q9UPP5 1409 aa26.68■■□□□ 1.86
COPS7A-210ENST00000539735 TRAPPC8Q9Y2L5 1435 aa26.68■■□□□ 1.86
COPS7A-210ENST00000539735 ZNF518AQ6AHZ1 1483 aa26.67■■□□□ 1.86
COPS7A-210ENST00000539735 MIA2Q96PC5 1412 aa26.67■■□□□ 1.86
COPS7A-210ENST00000539735 FRMPD1Q5SYB0 1578 aa26.66■■□□□ 1.86
COPS7A-210ENST00000539735 SYCP2Q9BX26 1530 aa26.66■■□□□ 1.86
COPS7A-210ENST00000539735 CAMSAP2Q08AD1 1489 aa26.64■■□□□ 1.85
COPS7A-210ENST00000539735 RICTORQ6R327 1708 aa26.63■■□□□ 1.85
COPS7A-210ENST00000539735 TCOF1Q13428 1488 aaKnown RBP26.61■■□□□ 1.85
COPS7A-210ENST00000539735 PTPRKQ15262 1439 aa26.6■■□□□ 1.85
COPS7A-210ENST00000539735 MBD5Q9P267 1494 aa26.59■■□□□ 1.85
COPS7A-210ENST00000539735 SPAG9O60271 1321 aaKnown RBP26.58■■□□□ 1.85
COPS7A-210ENST00000539735 RSPH4AQ5TD94 716 aa26.58■■□□□ 1.84
COPS7A-210ENST00000539735 MAGI2Q86UL8 1455 aa26.57■■□□□ 1.84
COPS7A-210ENST00000539735 ZMYM4Q5VZL5 1548 aa26.57■■□□□ 1.84
COPS7A-210ENST00000539735 YEATS2Q9ULM3 1422 aa26.56■■□□□ 1.84
COPS7A-210ENST00000539735 KDM5CP41229 1560 aa26.55■■□□□ 1.84
COPS7A-210ENST00000539735 SCAF1Q9H7N4 1312 aaKnown RBP26.53■■□□□ 1.84
COPS7A-210ENST00000539735 ACIN1Q9UKV3 1341 aaKnown RBP26.53■■□□□ 1.84
COPS7A-210ENST00000539735 TSPY4P0CV99 314 aa26.53■■□□□ 1.84
COPS7A-210ENST00000539735 TSPY10P0CW01 314 aa26.53■■□□□ 1.84
COPS7A-210ENST00000539735 ZFYVE16Q7Z3T8 1539 aa26.53■■□□□ 1.84
COPS7A-210ENST00000539735 CENPBP07199 599 aaPredicted RBP26.53■■□□□ 1.84
COPS7A-210ENST00000539735 MLH3Q9UHC1 1453 aa26.52■■□□□ 1.84
COPS7A-210ENST00000539735 CCDC141Q6ZP82 1450 aa26.52■■□□□ 1.84
COPS7A-210ENST00000539735 ARID4BQ4LE39 1312 aaPredicted RBP26.49■■□□□ 1.83
COPS7A-210ENST00000539735 HFM1A2PYH4 1435 aa26.49■■□□□ 1.83
COPS7A-210ENST00000539735 HECW2Q9P2P5 1572 aa26.48■■□□□ 1.83
COPS7A-210ENST00000539735 ARHGEF40Q8TER5 1519 aa26.48■■□□□ 1.83
COPS7A-210ENST00000539735 ATP10AO60312 1499 aa26.45■■□□□ 1.82
COPS7A-210ENST00000539735 ARHGEF5Q12774 1597 aa26.45■■□□□ 1.82
COPS7A-210ENST00000539735 CHIC2Q9UKJ5 165 aa26.44■■□□□ 1.82
COPS7A-210ENST00000539735 NAIPQ13075 1403 aa26.44■■□□□ 1.82
COPS7A-210ENST00000539735 ATP7AQ04656 1500 aa26.42■■□□□ 1.82
COPS7A-210ENST00000539735 RTEL1-TNFRSF6BF6WH68 1400 aa26.42■■□□□ 1.82
COPS7A-210ENST00000539735 NEUROD1Q13562 356 aa26.42■■□□□ 1.82
COPS7A-210ENST00000539735 ABCC5O15440 1437 aa26.41■■□□□ 1.82
COPS7A-210ENST00000539735 C9orf84Q5VXU9 1444 aa26.4■■□□□ 1.82
COPS7A-210ENST00000539735 KIDINS220Q9ULH0 1771 aa26.4■■□□□ 1.82
COPS7A-210ENST00000539735 RRP7BPQ9NSQ0 103 aa26.39■■□□□ 1.82
COPS7A-210ENST00000539735 DAPK1P53355 1430 aa26.39■■□□□ 1.82
COPS7A-210ENST00000539735 INO80Q9ULG1 1556 aaPredicted RBP26.38■■□□□ 1.81
COPS7A-210ENST00000539735 DIP2CQ9Y2E4 1556 aa26.38■■□□□ 1.81
COPS7A-210ENST00000539735 ABCA6Q8N139 1617 aa26.37■■□□□ 1.81
COPS7A-210ENST00000539735 MIER1Q8N108 512 aa26.35■■□□□ 1.81
COPS7A-210ENST00000539735 DNMT1P26358 1616 aaKnown RBP26.35■■□□□ 1.81
COPS7A-210ENST00000539735 MLECQ14165 292 aa26.35■■□□□ 1.81
COPS7A-210ENST00000539735 GCC2Q8IWJ2 1684 aa26.32■■□□□ 1.8
COPS7A-210ENST00000539735 KDM4FA0A1W2PPD8 638 aa26.32■■□□□ 1.8
COPS7A-210ENST00000539735 A2MP01023 1474 aa26.31■■□□□ 1.8
COPS7A-210ENST00000539735 SHANK2Q9UPX8 1470 aa26.31■■□□□ 1.8
COPS7A-210ENST00000539735 DHX29Q7Z478 1369 aaKnown RBP26.28■■□□□ 1.8
COPS7A-210ENST00000539735 MAST1Q9Y2H9 1570 aa26.28■■□□□ 1.8
COPS7A-210ENST00000539735 ANKRD30AQ9BXX3 1397 aa26.27■■□□□ 1.8
COPS7A-210ENST00000539735 TIMELESSQ9UNS1 1208 aa26.27■■□□□ 1.8
COPS7A-210ENST00000539735 REREQ9P2R6 1566 aa26.26■■□□□ 1.8
COPS7A-210ENST00000539735 ROCK1Q13464 1354 aa26.26■■□□□ 1.79
COPS7A-210ENST00000539735 SIGLEC1Q9BZZ2 1709 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms