RNA–Protein interactions for RNA: ENST00000537880.1

TCHP-205, Transcript of trichoplein keratin filament binding, humanhuman

TSL 1 (best)

Gene TCHP, Length 2,817 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-205ENST00000537880 WDR7Q9Y4E6 1490 aa16.22■□□□□ 0.19
TCHP-205ENST00000537880 FGD6Q6ZV73 1430 aa16.22■□□□□ 0.19
TCHP-205ENST00000537880 CDK11AQ9UQ88 783 aaPredicted RBP16.21■□□□□ 0.19
TCHP-205ENST00000537880 MIA2Q96PC5 1412 aa16.21■□□□□ 0.19
TCHP-205ENST00000537880 CROCC2H7BZ55 1655 aa16.21■□□□□ 0.18
TCHP-205ENST00000537880 ARAP3Q8WWN8 1544 aa16.2■□□□□ 0.18
TCHP-205ENST00000537880 GPATCH8Q9UKJ3 1502 aaKnown RBP16.19■□□□□ 0.18
TCHP-205ENST00000537880 CCNB3Q8WWL7 1395 aa16.18■□□□□ 0.18
TCHP-205ENST00000537880 MIER1Q8N108 512 aa16.17■□□□□ 0.18
TCHP-205ENST00000537880 ASXL2Q76L83 1435 aa16.17■□□□□ 0.18
TCHP-205ENST00000537880 ARID3CA6NKF2 412 aa16.17■□□□□ 0.18
TCHP-205ENST00000537880 DNMT1P26358 1616 aaKnown RBP16.16■□□□□ 0.18
TCHP-205ENST00000537880 GLI2P10070 1586 aa16.15■□□□□ 0.18
TCHP-205ENST00000537880 PLEKHD1A6NEE1 506 aa16.15■□□□□ 0.18
TCHP-205ENST00000537880 SUPT16HQ9Y5B9 1047 aaKnown RBP16.15■□□□□ 0.18
TCHP-205ENST00000537880 MAP3K4Q9Y6R4 1608 aa16.15■□□□□ 0.18
TCHP-205ENST00000537880 SAMD9LQ8IVG5 1584 aa16.14■□□□□ 0.17
TCHP-205ENST00000537880 ZNF316A6NFI3 1004 aaPredicted RBP16.14■□□□□ 0.17
TCHP-205ENST00000537880 KIF13AQ9H1H9 1805 aa16.13■□□□□ 0.17
TCHP-205ENST00000537880 ADGBQ8N7X0 1667 aa16.12■□□□□ 0.17
TCHP-205ENST00000537880 DIP2BQ9P265 1576 aa16.11■□□□□ 0.17
TCHP-205ENST00000537880 ARHGEF5Q12774 1597 aa16.11■□□□□ 0.17
TCHP-205ENST00000537880 CAMSAP2Q08AD1 1489 aa16.11■□□□□ 0.17
TCHP-205ENST00000537880 ERICH6Q7L0X2 663 aa16.1■□□□□ 0.17
TCHP-205ENST00000537880 GCC2Q8IWJ2 1684 aa16.1■□□□□ 0.17
TCHP-205ENST00000537880 CFAP74Q9C0B2 1584 aa16.09■□□□□ 0.17
TCHP-205ENST00000537880 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
TCHP-205ENST00000537880 PPRC1Q5VV67 1664 aaKnown RBP16.07■□□□□ 0.16
TCHP-205ENST00000537880 PLCH2O75038 1416 aa16.07■□□□□ 0.16
TCHP-205ENST00000537880 ABCC1P33527 1531 aa16.06■□□□□ 0.16
TCHP-205ENST00000537880 MAST1Q9Y2H9 1570 aa16.05■□□□□ 0.16
TCHP-205ENST00000537880 CYB5RLQ6IPT4 315 aa16.04■□□□□ 0.16
TCHP-205ENST00000537880 ARHGAP5Q13017 1502 aa16.04■□□□□ 0.16
TCHP-205ENST00000537880 SHANK2Q9UPX8 1470 aa16.03■□□□□ 0.16
TCHP-205ENST00000537880 PTPRKQ15262 1439 aa16.02■□□□□ 0.16
TCHP-205ENST00000537880 AKNAQ7Z591 1439 aa16.02■□□□□ 0.15
TCHP-205ENST00000537880 MBD5Q9P267 1494 aa16.01■□□□□ 0.15
TCHP-205ENST00000537880 DAPK1P53355 1430 aa16.01■□□□□ 0.15
TCHP-205ENST00000537880 PLEKHH2Q8IVE3 1493 aa16.01■□□□□ 0.15
TCHP-205ENST00000537880 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
TCHP-205ENST00000537880 SYCP2Q9BX26 1530 aa16■□□□□ 0.15
TCHP-205ENST00000537880 ADGRL2O95490 1459 aa16■□□□□ 0.15
TCHP-205ENST00000537880 KIAA1107Q9UPP5 1409 aa16■□□□□ 0.15
TCHP-205ENST00000537880 ABCC5O15440 1437 aa15.99■□□□□ 0.15
TCHP-205ENST00000537880 ARHGEF12Q9NZN5 1544 aa15.98■□□□□ 0.15
TCHP-205ENST00000537880 PLXNC1O60486 1568 aa15.97■□□□□ 0.15
TCHP-205ENST00000537880 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.15
TCHP-205ENST00000537880 CFDP1Q9UEE9 299 aaPredicted RBP15.95■□□□□ 0.14
TCHP-205ENST00000537880 INO80Q9ULG1 1556 aaPredicted RBP15.95■□□□□ 0.14
TCHP-205ENST00000537880 FANCAO15360 1455 aa15.95■□□□□ 0.14
TCHP-205ENST00000537880 CLSPNQ9HAW4 1339 aa15.95■□□□□ 0.14
TCHP-205ENST00000537880 RICTORQ6R327 1708 aa15.95■□□□□ 0.14
TCHP-205ENST00000537880 CCDC141Q6ZP82 1450 aa15.94■□□□□ 0.14
TCHP-205ENST00000537880 ZNF644Q9H582 1327 aaPredicted RBP15.94■□□□□ 0.14
TCHP-205ENST00000537880 ROCK1Q13464 1354 aa15.94■□□□□ 0.14
TCHP-205ENST00000537880 HFM1A2PYH4 1435 aa15.94■□□□□ 0.14
TCHP-205ENST00000537880 NEO1Q92859 1461 aa15.93■□□□□ 0.14
TCHP-205ENST00000537880 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
TCHP-205ENST00000537880 FAM50AQ14320 339 aaKnown RBP15.92■□□□□ 0.14
TCHP-205ENST00000537880 CD109Q6YHK3 1445 aa15.92■□□□□ 0.14
TCHP-205ENST00000537880 KDM5CP41229 1560 aa15.92■□□□□ 0.14
TCHP-205ENST00000537880 TSPOAP1O95153 1857 aa15.92■□□□□ 0.14
TCHP-205ENST00000537880 KDM6BO15054 1643 aa15.91■□□□□ 0.14
TCHP-205ENST00000537880 NAIPQ13075 1403 aa15.9■□□□□ 0.14
TCHP-205ENST00000537880 ZFYVE16Q7Z3T8 1539 aa15.89■□□□□ 0.13
TCHP-205ENST00000537880 FRMPD1Q5SYB0 1578 aa15.89■□□□□ 0.13
TCHP-205ENST00000537880 KIDINS220Q9ULH0 1771 aa15.88■□□□□ 0.13
TCHP-205ENST00000537880 ADGRL1O94910 1474 aa15.87■□□□□ 0.13
TCHP-205ENST00000537880 C9orf84Q5VXU9 1444 aa15.87■□□□□ 0.13
TCHP-205ENST00000537880 SETD5Q9C0A6 1442 aa15.87■□□□□ 0.13
TCHP-205ENST00000537880 EFCAB2Q5VUJ9 269 aa15.86■□□□□ 0.13
TCHP-205ENST00000537880 NCOA1Q15788 1441 aa15.85■□□□□ 0.13
TCHP-205ENST00000537880 TRAPPC8Q9Y2L5 1435 aa15.85■□□□□ 0.13
TCHP-205ENST00000537880 RSPH4AQ5TD94 716 aa15.85■□□□□ 0.13
TCHP-205ENST00000537880 BCORL1Q5H9F3 1711 aa15.85■□□□□ 0.13
TCHP-205ENST00000537880 ZMYM4Q5VZL5 1548 aa15.84■□□□□ 0.13
TCHP-205ENST00000537880 HECW2Q9P2P5 1572 aa15.84■□□□□ 0.13
TCHP-205ENST00000537880 RTEL1-TNFRSF6BF6WH68 1400 aa15.84■□□□□ 0.13
TCHP-205ENST00000537880 TEX14Q8IWB6 1497 aa15.84■□□□□ 0.13
TCHP-205ENST00000537880 POGZQ7Z3K3 1410 aa15.83■□□□□ 0.13
TCHP-205ENST00000537880 ATP7AQ04656 1500 aa15.83■□□□□ 0.12
TCHP-205ENST00000537880 RAB3GAP2Q9H2M9 1393 aa15.82■□□□□ 0.12
TCHP-205ENST00000537880 ZNF518AQ6AHZ1 1483 aa15.82■□□□□ 0.12
TCHP-205ENST00000537880 ANO8Q9HCE9 1232 aaPredicted RBP15.82■□□□□ 0.12
TCHP-205ENST00000537880 EIF2AK4Q9P2K8 1649 aaKnown RBP15.82■□□□□ 0.12
TCHP-205ENST00000537880 UNC13BO14795 1591 aa15.82■□□□□ 0.12
TCHP-205ENST00000537880 DEPDC5O75140 1603 aa15.81■□□□□ 0.12
TCHP-205ENST00000537880 ZNF777Q9ULD5 760 aaPredicted RBP15.81■□□□□ 0.12
TCHP-205ENST00000537880 ABCA6Q8N139 1617 aa15.8■□□□□ 0.12
TCHP-205ENST00000537880 HNRNPMP52272 730 aaKnown RBP eCLIP15.8■□□□□ 0.12
TCHP-205ENST00000537880 KDM5DQ9BY66 1539 aa15.8■□□□□ 0.12
TCHP-205ENST00000537880 SCAPERQ9BY12 1400 aa15.79■□□□□ 0.12
TCHP-205ENST00000537880 DUOX2Q9NRD8 1548 aa15.79■□□□□ 0.12
TCHP-205ENST00000537880 RBM19Q9Y4C8 960 aaKnown RBP15.79■□□□□ 0.12
TCHP-205ENST00000537880 MLH3Q9UHC1 1453 aa15.78■□□□□ 0.12
TCHP-205ENST00000537880 ITGAEP38570 1179 aa15.78■□□□□ 0.12
TCHP-205ENST00000537880 BCANQ96GW7 911 aa15.78■□□□□ 0.12
TCHP-205ENST00000537880 ANKRD30AQ9BXX3 1397 aa15.78■□□□□ 0.12
TCHP-205ENST00000537880 MAGI2Q86UL8 1455 aa15.77■□□□□ 0.11
TCHP-205ENST00000537880 FAM69CQ0P6D2 419 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms