RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 AFAP1Q8N556 730 aa13.42□□□□□ -0.26
DDB1-208ENST00000537120 ARHGAP5Q13017 1502 aa13.42□□□□□ -0.26
DDB1-208ENST00000537120 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
DDB1-208ENST00000537120 MYO5CQ9NQX4 1742 aa13.42□□□□□ -0.26
DDB1-208ENST00000537120 FRMPD1Q5SYB0 1578 aa13.41□□□□□ -0.26
DDB1-208ENST00000537120 RICTORQ6R327 1708 aa13.4□□□□□ -0.26
DDB1-208ENST00000537120 MAGI2Q86UL8 1455 aa13.4□□□□□ -0.26
DDB1-208ENST00000537120 PTPRMP28827 1452 aa13.39□□□□□ -0.27
DDB1-208ENST00000537120 ZFYVE16Q7Z3T8 1539 aa13.39□□□□□ -0.27
DDB1-208ENST00000537120 YEATS2Q9ULM3 1422 aa13.39□□□□□ -0.27
DDB1-208ENST00000537120 PCF11O94913 1555 aaKnown RBP13.38□□□□□ -0.27
DDB1-208ENST00000537120 FYCO1Q9BQS8 1478 aa13.37□□□□□ -0.27
DDB1-208ENST00000537120 ADAMTSL3P82987 1691 aa13.37□□□□□ -0.27
DDB1-208ENST00000537120 LRRIQ1Q96JM4 1722 aa13.36□□□□□ -0.27
DDB1-208ENST00000537120 ARHGEF40Q8TER5 1519 aa13.36□□□□□ -0.27
DDB1-208ENST00000537120 ESF1Q9H501 851 aaKnown RBP13.36□□□□□ -0.27
DDB1-208ENST00000537120 BCORL1Q5H9F3 1711 aa13.36□□□□□ -0.27
DDB1-208ENST00000537120 ATP10AO60312 1499 aa13.36□□□□□ -0.27
DDB1-208ENST00000537120 MTUS2Q5JR59 1369 aa13.35□□□□□ -0.27
DDB1-208ENST00000537120 ZMYM4Q5VZL5 1548 aa13.35□□□□□ -0.27
DDB1-208ENST00000537120 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
DDB1-208ENST00000537120 CFDP1Q9UEE9 299 aaPredicted RBP13.34□□□□□ -0.27
DDB1-208ENST00000537120 MADDQ8WXG6 1647 aa13.34□□□□□ -0.27
DDB1-208ENST00000537120 ZNF518AQ6AHZ1 1483 aa13.34□□□□□ -0.27
DDB1-208ENST00000537120 HNRNPMP52272 730 aaKnown RBP eCLIP13.33□□□□□ -0.282e-7■■■■□ 25.2
DDB1-208ENST00000537120 CCNB3Q8WWL7 1395 aa13.32□□□□□ -0.28
DDB1-208ENST00000537120 C9orf84Q5VXU9 1444 aa13.31□□□□□ -0.28
DDB1-208ENST00000537120 RIMS1Q86UR5 1692 aaKnown RBP13.31□□□□□ -0.28
DDB1-208ENST00000537120 CEP162Q5TB80 1403 aa13.3□□□□□ -0.28
DDB1-208ENST00000537120 CDC42BPBQ9Y5S2 1711 aa13.3□□□□□ -0.28
DDB1-208ENST00000537120 SPAG9O60271 1321 aaKnown RBP13.3□□□□□ -0.28
DDB1-208ENST00000537120 CEBPAP49715 358 aaPredicted RBP13.29□□□□□ -0.28
DDB1-208ENST00000537120 TRAPPC8Q9Y2L5 1435 aa13.29□□□□□ -0.28
DDB1-208ENST00000537120 HSPA2P54652 639 aa13.28□□□□□ -0.28
DDB1-208ENST00000537120 FOXD1Q16676 465 aa13.28□□□□□ -0.28
DDB1-208ENST00000537120 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
DDB1-208ENST00000537120 GPATCH8Q9UKJ3 1502 aaKnown RBP13.27□□□□□ -0.29
DDB1-208ENST00000537120 CDC42BPAQ5VT25 1732 aa13.26□□□□□ -0.29
DDB1-208ENST00000537120 MLH3Q9UHC1 1453 aa13.26□□□□□ -0.29
DDB1-208ENST00000537120 ARHGEF12Q9NZN5 1544 aa13.25□□□□□ -0.29
DDB1-208ENST00000537120 FER1L4A9Z1Z3 1794 aa13.24□□□□□ -0.29
DDB1-208ENST00000537120 KDM5CP41229 1560 aa13.24□□□□□ -0.29
DDB1-208ENST00000537120 ABCC1P33527 1531 aa13.23□□□□□ -0.29
DDB1-208ENST00000537120 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
DDB1-208ENST00000537120 SIGLEC1Q9BZZ2 1709 aa13.23□□□□□ -0.29
DDB1-208ENST00000537120 APLP2Q06481 763 aa13.23□□□□□ -0.29
DDB1-208ENST00000537120 FBXO41Q8TF61 875 aa13.23□□□□□ -0.29
DDB1-208ENST00000537120 ITSN2Q9NZM3 1697 aa13.22□□□□□ -0.29
DDB1-208ENST00000537120 ZNF644Q9H582 1327 aaPredicted RBP13.22□□□□□ -0.29
DDB1-208ENST00000537120 KIAA1107Q9UPP5 1409 aa13.21□□□□□ -0.3
DDB1-208ENST00000537120 DIP2CQ9Y2E4 1556 aa13.2□□□□□ -0.3
DDB1-208ENST00000537120 GGT6Q6P531 493 aa13.2□□□□□ -0.3
DDB1-208ENST00000537120 LMTK3Q96Q04 1460 aa13.2□□□□□ -0.3
DDB1-208ENST00000537120 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
DDB1-208ENST00000537120 SYCP2Q9BX26 1530 aa13.19□□□□□ -0.3
DDB1-208ENST00000537120 EHBP1L1Q8N3D4 1523 aa13.18□□□□□ -0.3
DDB1-208ENST00000537120 ABCA6Q8N139 1617 aa13.18□□□□□ -0.3
DDB1-208ENST00000537120 KIDINS220Q9ULH0 1771 aa13.17□□□□□ -0.3
DDB1-208ENST00000537120 TSPY4P0CV99 314 aa13.17□□□□□ -0.3
DDB1-208ENST00000537120 TSPY10P0CW01 314 aa13.17□□□□□ -0.3
DDB1-208ENST00000537120 RSPH4AQ5TD94 716 aa13.17□□□□□ -0.3
DDB1-208ENST00000537120 SETD1BQ9UPS6 1966 aaKnown RBP13.16□□□□□ -0.3
DDB1-208ENST00000537120 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
DDB1-208ENST00000537120 AGLP35573 1532 aa13.16□□□□□ -0.3
DDB1-208ENST00000537120 REREQ9P2R6 1566 aa13.15□□□□□ -0.3
DDB1-208ENST00000537120 UHRF1BP1Q6BDS2 1440 aa13.15□□□□□ -0.3
DDB1-208ENST00000537120 VPS8Q8N3P4 1428 aa13.15□□□□□ -0.3
DDB1-208ENST00000537120 CNTLNQ9NXG0 1405 aa13.14□□□□□ -0.31
DDB1-208ENST00000537120 ATP7AQ04656 1500 aa13.14□□□□□ -0.31
DDB1-208ENST00000537120 SUPT6HQ7KZ85 1726 aaKnown RBP13.14□□□□□ -0.31
DDB1-208ENST00000537120 A2MP01023 1474 aa13.14□□□□□ -0.31
DDB1-208ENST00000537120 NCOA2Q15596 1464 aa13.14□□□□□ -0.31
DDB1-208ENST00000537120 TIAM1Q13009 1591 aa13.13□□□□□ -0.31
DDB1-208ENST00000537120 ZMYM3Q14202 1370 aa13.12□□□□□ -0.31
DDB1-208ENST00000537120 KIF3BO15066 747 aa13.12□□□□□ -0.31
DDB1-208ENST00000537120 KANK4Q5T7N3 995 aaPredicted RBP13.12□□□□□ -0.31
DDB1-208ENST00000537120 PPP6R1Q9UPN7 881 aa13.12□□□□□ -0.31
DDB1-208ENST00000537120 PREX1Q8TCU6 1659 aa13.1□□□□□ -0.31
DDB1-208ENST00000537120 LRRC9Q6ZRR7 1453 aa13.1□□□□□ -0.31
DDB1-208ENST00000537120 MBD5Q9P267 1494 aa13.1□□□□□ -0.31
DDB1-208ENST00000537120 DHX29Q7Z478 1369 aaKnown RBP13.09□□□□□ -0.31
DDB1-208ENST00000537120 C3P01024 1663 aa13.09□□□□□ -0.31
DDB1-208ENST00000537120 RTEL1-TNFRSF6BF6WH68 1400 aa13.09□□□□□ -0.31
DDB1-208ENST00000537120 CERKQ8TCT0 537 aa13.08□□□□□ -0.32
DDB1-208ENST00000537120 CAMSAP2Q08AD1 1489 aa13.08□□□□□ -0.32
DDB1-208ENST00000537120 WASHC2CQ9Y4E1 1318 aa13.08□□□□□ -0.32
DDB1-208ENST00000537120 CCDC141Q6ZP82 1450 aa13.07□□□□□ -0.32
DDB1-208ENST00000537120 INO80Q9ULG1 1556 aaPredicted RBP13.07□□□□□ -0.32
DDB1-208ENST00000537120 ADGBQ8N7X0 1667 aa13.05□□□□□ -0.32
DDB1-208ENST00000537120 CLTCQ00610 1675 aaKnown RBP13.04□□□□□ -0.32
DDB1-208ENST00000537120 NPATQ14207 1427 aa13.04□□□□□ -0.32
DDB1-208ENST00000537120 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
DDB1-208ENST00000537120 NCKAP5LQ9HCH0 1330 aa13.02□□□□□ -0.33
DDB1-208ENST00000537120 MROH2AA6NES4 1674 aa13.02□□□□□ -0.33
DDB1-208ENST00000537120 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
DDB1-208ENST00000537120 MYOM3Q5VTT5 1437 aa13.01□□□□□ -0.33
DDB1-208ENST00000537120 MIA2Q96PC5 1412 aa13.01□□□□□ -0.33
DDB1-208ENST00000537120 PLXNC1O60486 1568 aa13.01□□□□□ -0.33
DDB1-208ENST00000537120 ARHGEF5Q12774 1597 aa12.99□□□□□ -0.33
DDB1-208ENST00000537120 PTPRKQ15262 1439 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms