RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 PREX2Q70Z35 1606 aa10.38□□□□□ -0.75
IFT88-207ENST00000537103 PPRC1Q5VV67 1664 aaKnown RBP10.38□□□□□ -0.75
IFT88-207ENST00000537103 LRRC9Q6ZRR7 1453 aa10.38□□□□□ -0.75
IFT88-207ENST00000537103 FKBP8Q14318 412 aa10.38□□□□□ -0.75
IFT88-207ENST00000537103 P3H3Q8IVL6 736 aa10.38□□□□□ -0.75
IFT88-207ENST00000537103 PLEKHH2Q8IVE3 1493 aa10.36□□□□□ -0.75
IFT88-207ENST00000537103 PLCH2O75038 1416 aa10.35□□□□□ -0.75
IFT88-207ENST00000537103 TPRNQ4KMQ1 711 aa10.34□□□□□ -0.75
IFT88-207ENST00000537103 TTC37Q6PGP7 1564 aa10.34□□□□□ -0.75
IFT88-207ENST00000537103 MIA2Q96PC5 1412 aa10.34□□□□□ -0.75
IFT88-207ENST00000537103 CD109Q6YHK3 1445 aa10.33□□□□□ -0.76
IFT88-207ENST00000537103 CDC42BPAQ5VT25 1732 aa10.32□□□□□ -0.76
IFT88-207ENST00000537103 MTUS2Q5JR59 1369 aa10.32□□□□□ -0.76
IFT88-207ENST00000537103 HAP1P54257 671 aaPredicted RBP10.31□□□□□ -0.76
IFT88-207ENST00000537103 KIAA1107Q9UPP5 1409 aa10.31□□□□□ -0.76
IFT88-207ENST00000537103 ZMYM4Q5VZL5 1548 aa10.31□□□□□ -0.76
IFT88-207ENST00000537103 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.31□□□□□ -0.76
IFT88-207ENST00000537103 TCOF1Q13428 1488 aaKnown RBP10.3□□□□□ -0.76
IFT88-207ENST00000537103 NCOA2Q15596 1464 aa10.3□□□□□ -0.76
IFT88-207ENST00000537103 MAGI2Q86UL8 1455 aa10.29□□□□□ -0.76
IFT88-207ENST00000537103 ARHGEF5Q12774 1597 aa10.29□□□□□ -0.76
IFT88-207ENST00000537103 GPATCH8Q9UKJ3 1502 aaKnown RBP10.29□□□□□ -0.76
IFT88-207ENST00000537103 CDC42BPBQ9Y5S2 1711 aa10.29□□□□□ -0.76
IFT88-207ENST00000537103 APLP2Q06481 763 aa10.28□□□□□ -0.76
IFT88-207ENST00000537103 ABCC1P33527 1531 aa10.28□□□□□ -0.76
IFT88-207ENST00000537103 TULP1O00294 542 aaPredicted RBP10.28□□□□□ -0.76
IFT88-207ENST00000537103 FAM69CQ0P6D2 419 aa10.28□□□□□ -0.76
IFT88-207ENST00000537103 REREQ9P2R6 1566 aa10.27□□□□□ -0.77
IFT88-207ENST00000537103 MAST1Q9Y2H9 1570 aa10.27□□□□□ -0.77
IFT88-207ENST00000537103 FANCAO15360 1455 aa10.27□□□□□ -0.77
IFT88-207ENST00000537103 KDM5CP41229 1560 aa10.27□□□□□ -0.77
IFT88-207ENST00000537103 MYOM3Q5VTT5 1437 aa10.26□□□□□ -0.77
IFT88-207ENST00000537103 RANGAP1P46060 587 aaPredicted RBP10.26□□□□□ -0.77
IFT88-207ENST00000537103 RSPH4AQ5TD94 716 aa10.26□□□□□ -0.77
IFT88-207ENST00000537103 ARXQ96QS3 562 aa10.26□□□□□ -0.77
IFT88-207ENST00000537103 CCNB3Q8WWL7 1395 aa10.26□□□□□ -0.77
IFT88-207ENST00000537103 AKNAQ7Z591 1439 aa10.25□□□□□ -0.77
IFT88-207ENST00000537103 RICTORQ6R327 1708 aa10.25□□□□□ -0.77
IFT88-207ENST00000537103 SHANK2Q9UPX8 1470 aa10.25□□□□□ -0.77
IFT88-207ENST00000537103 ARHGAP5Q13017 1502 aa10.25□□□□□ -0.77
IFT88-207ENST00000537103 KDM6BO15054 1643 aa10.24□□□□□ -0.77
IFT88-207ENST00000537103 EFCAB2Q5VUJ9 269 aa10.24□□□□□ -0.77
IFT88-207ENST00000537103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.24□□□□□ -0.77
IFT88-207ENST00000537103 HNRNPUL2Q1KMD3 747 aaKnown RBP10.24□□□□□ -0.77
IFT88-207ENST00000537103 SAMD9LQ8IVG5 1584 aa10.24□□□□□ -0.77
IFT88-207ENST00000537103 TTBK1Q5TCY1 1321 aaPredicted RBP10.23□□□□□ -0.77
IFT88-207ENST00000537103 RTEL1-TNFRSF6BF6WH68 1400 aa10.23□□□□□ -0.77
IFT88-207ENST00000537103 DENND4BO75064 1496 aaPredicted RBP10.23□□□□□ -0.77
IFT88-207ENST00000537103 POGZQ7Z3K3 1410 aa10.23□□□□□ -0.77
IFT88-207ENST00000537103 ZNF518AQ6AHZ1 1483 aa10.23□□□□□ -0.77
IFT88-207ENST00000537103 FRMPD1Q5SYB0 1578 aa10.23□□□□□ -0.77
IFT88-207ENST00000537103 MLH3Q9UHC1 1453 aa10.23□□□□□ -0.77
IFT88-207ENST00000537103 FAM135AQ9P2D6 1515 aa10.22□□□□□ -0.77
IFT88-207ENST00000537103 FOXD4L1Q9NU39 408 aa10.21□□□□□ -0.77
IFT88-207ENST00000537103 ADGRL1O94910 1474 aa10.21□□□□□ -0.77
IFT88-207ENST00000537103 CROCC2H7BZ55 1655 aa10.21□□□□□ -0.77
IFT88-207ENST00000537103 BCORL1Q5H9F3 1711 aa10.21□□□□□ -0.78
IFT88-207ENST00000537103 PTPN23Q9H3S7 1636 aa10.21□□□□□ -0.78
IFT88-207ENST00000537103 INO80Q9ULG1 1556 aaPredicted RBP10.21□□□□□ -0.78
IFT88-207ENST00000537103 RRBP1Q9P2E9 1410 aaKnown RBP10.2□□□□□ -0.78
IFT88-207ENST00000537103 ARHGEF40Q8TER5 1519 aa10.2□□□□□ -0.78
IFT88-207ENST00000537103 FGD6Q6ZV73 1430 aa10.2□□□□□ -0.78
IFT88-207ENST00000537103 HECW2Q9P2P5 1572 aa10.2□□□□□ -0.78
IFT88-207ENST00000537103 CAMSAP2Q08AD1 1489 aa10.2□□□□□ -0.78
IFT88-207ENST00000537103 ATP1B4Q9UN42 357 aaPredicted RBP10.2□□□□□ -0.78
IFT88-207ENST00000537103 DNMT1P26358 1616 aaKnown RBP10.19□□□□□ -0.78
IFT88-207ENST00000537103 PLXNC1O60486 1568 aa10.19□□□□□ -0.78
IFT88-207ENST00000537103 MBD5Q9P267 1494 aa10.19□□□□□ -0.78
IFT88-207ENST00000537103 CCDC141Q6ZP82 1450 aa10.19□□□□□ -0.78
IFT88-207ENST00000537103 TRHP20396 242 aaPredicted RBP10.18□□□□□ -0.78
IFT88-207ENST00000537103 TSPOAP1O95153 1857 aa10.18□□□□□ -0.78
IFT88-207ENST00000537103 ACIN1Q9UKV3 1341 aaKnown RBP10.18□□□□□ -0.78
IFT88-207ENST00000537103 AGLP35573 1532 aa10.18□□□□□ -0.78
IFT88-207ENST00000537103 KCNH8Q96L42 1107 aa10.18□□□□□ -0.78
IFT88-207ENST00000537103 ADGRL2O95490 1459 aa10.17□□□□□ -0.78
IFT88-207ENST00000537103 ADGBQ8N7X0 1667 aa10.17□□□□□ -0.78
IFT88-207ENST00000537103 EIF2AK4Q9P2K8 1649 aaKnown RBP10.16□□□□□ -0.78
IFT88-207ENST00000537103 ZFYVE16Q7Z3T8 1539 aa10.16□□□□□ -0.78
IFT88-207ENST00000537103 SCAPERQ9BY12 1400 aa10.16□□□□□ -0.78
IFT88-207ENST00000537103 KANK4Q5T7N3 995 aaPredicted RBP10.16□□□□□ -0.78
IFT88-207ENST00000537103 CFDP1Q9UEE9 299 aaPredicted RBP10.16□□□□□ -0.78
IFT88-207ENST00000537103 SYCP2Q9BX26 1530 aa10.15□□□□□ -0.78
IFT88-207ENST00000537103 CNKSR2Q8WXI2 1034 aa10.15□□□□□ -0.78
IFT88-207ENST00000537103 ARHGEF12Q9NZN5 1544 aa10.14□□□□□ -0.79
IFT88-207ENST00000537103 ROCK1Q13464 1354 aa10.14□□□□□ -0.79
IFT88-207ENST00000537103 ATP7AQ04656 1500 aa10.13□□□□□ -0.79
IFT88-207ENST00000537103 DIP2CQ9Y2E4 1556 aa10.13□□□□□ -0.79
IFT88-207ENST00000537103 COL17A1Q9UMD9 1497 aaPredicted RBP10.12□□□□□ -0.79
IFT88-207ENST00000537103 KIDINS220Q9ULH0 1771 aa10.12□□□□□ -0.79
IFT88-207ENST00000537103 C9orf84Q5VXU9 1444 aa10.12□□□□□ -0.79
IFT88-207ENST00000537103 ARID3CA6NKF2 412 aa10.12□□□□□ -0.79
IFT88-207ENST00000537103 ATP10AO60312 1499 aa10.11□□□□□ -0.79
IFT88-207ENST00000537103 DAPK1P53355 1430 aa10.11□□□□□ -0.79
IFT88-207ENST00000537103 DUOX2Q9NRD8 1548 aa10.1□□□□□ -0.79
IFT88-207ENST00000537103 ABCA6Q8N139 1617 aa10.1□□□□□ -0.79
IFT88-207ENST00000537103 TRAPPC8Q9Y2L5 1435 aa10.1□□□□□ -0.79
IFT88-207ENST00000537103 ERBINQ96RT1 1412 aa10.09□□□□□ -0.79
IFT88-207ENST00000537103 ABCC5O15440 1437 aa10.09□□□□□ -0.79
IFT88-207ENST00000537103 RNF17Q9BXT8 1623 aaKnown RBP10.09□□□□□ -0.79
IFT88-207ENST00000537103 KDM5DQ9BY66 1539 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms