RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 FYCO1Q9BQS8 1478 aa21.39■■□□□ 1.02
MRPS35-202ENST00000536569 PCF11O94913 1555 aaKnown RBP21.39■■□□□ 1.01
MRPS35-202ENST00000536569 BCORL1Q5H9F3 1711 aa21.38■■□□□ 1.01
MRPS35-202ENST00000536569 ARID4BQ4LE39 1312 aaPredicted RBP21.38■■□□□ 1.01
MRPS35-202ENST00000536569 ZFYVE16Q7Z3T8 1539 aa21.38■■□□□ 1.01
MRPS35-202ENST00000536569 HECW2Q9P2P5 1572 aa21.36■■□□□ 1.01
MRPS35-202ENST00000536569 PTPRMP28827 1452 aa21.36■■□□□ 1.01
MRPS35-202ENST00000536569 ARHGAP5Q13017 1502 aa21.34■■□□□ 1.01
MRPS35-202ENST00000536569 ZNF518AQ6AHZ1 1483 aa21.32■■□□□ 1
MRPS35-202ENST00000536569 YEATS2Q9ULM3 1422 aa21.32■■□□□ 1
MRPS35-202ENST00000536569 ATP10AO60312 1499 aa21.29■■□□□ 1
MRPS35-202ENST00000536569 MADDQ8WXG6 1647 aa21.29■■□□□ 1
MRPS35-202ENST00000536569 KDM5CP41229 1560 aa21.27■■□□□ 1
MRPS35-202ENST00000536569 CDC42BPBQ9Y5S2 1711 aa21.27■■□□□ 1
MRPS35-202ENST00000536569 PREX2Q70Z35 1606 aa21.27■■□□□ 1
MRPS35-202ENST00000536569 C9orf84Q5VXU9 1444 aa21.26■□□□□ 0.99
MRPS35-202ENST00000536569 AFAP1Q8N556 730 aa21.23■□□□□ 0.99
MRPS35-202ENST00000536569 MLH3Q9UHC1 1453 aa21.22■□□□□ 0.99
MRPS35-202ENST00000536569 ABCC1P33527 1531 aa21.22■□□□□ 0.99
MRPS35-202ENST00000536569 SIGLEC1Q9BZZ2 1709 aa21.21■□□□□ 0.99
MRPS35-202ENST00000536569 RIMS1Q86UR5 1692 aaKnown RBP21.21■□□□□ 0.99
MRPS35-202ENST00000536569 CDC42BPAQ5VT25 1732 aa21.2■□□□□ 0.98
MRPS35-202ENST00000536569 REREQ9P2R6 1566 aa21.19■□□□□ 0.98
MRPS35-202ENST00000536569 CEP162Q5TB80 1403 aa21.18■□□□□ 0.98
MRPS35-202ENST00000536569 ARHGEF12Q9NZN5 1544 aa21.17■□□□□ 0.98
MRPS35-202ENST00000536569 GPATCH8Q9UKJ3 1502 aaKnown RBP21.17■□□□□ 0.98
MRPS35-202ENST00000536569 ITSN2Q9NZM3 1697 aa21.16■□□□□ 0.98
MRPS35-202ENST00000536569 TRAPPC8Q9Y2L5 1435 aa21.16■□□□□ 0.98
MRPS35-202ENST00000536569 MTUS2Q5JR59 1369 aa21.16■□□□□ 0.98
MRPS35-202ENST00000536569 MYT1LQ9UL68 1186 aa21.15■□□□□ 0.98
MRPS35-202ENST00000536569 DIP2CQ9Y2E4 1556 aa21.14■□□□□ 0.98
MRPS35-202ENST00000536569 MLECQ14165 292 aa21.14■□□□□ 0.97
MRPS35-202ENST00000536569 FER1L4A9Z1Z3 1794 aa21.14■□□□□ 0.97
MRPS35-202ENST00000536569 PLEKHH2Q8IVE3 1493 aa21.13■□□□□ 0.97
MRPS35-202ENST00000536569 LMTK3Q96Q04 1460 aa21.13■□□□□ 0.97
MRPS35-202ENST00000536569 KIAA1107Q9UPP5 1409 aa21.12■□□□□ 0.97
MRPS35-202ENST00000536569 CCNB3Q8WWL7 1395 aa21.12■□□□□ 0.97
MRPS35-202ENST00000536569 AGLP35573 1532 aa21.11■□□□□ 0.97
MRPS35-202ENST00000536569 CFDP1Q9UEE9 299 aaPredicted RBP21.11■□□□□ 0.97
MRPS35-202ENST00000536569 SAMD9LQ8IVG5 1584 aa21.1■□□□□ 0.97
MRPS35-202ENST00000536569 ABCA6Q8N139 1617 aa21.1■□□□□ 0.97
MRPS35-202ENST00000536569 EHBP1L1Q8N3D4 1523 aa21.09■□□□□ 0.97
MRPS35-202ENST00000536569 ZNF777Q9ULD5 760 aaPredicted RBP21.09■□□□□ 0.97
MRPS35-202ENST00000536569 KIDINS220Q9ULH0 1771 aa21.07■□□□□ 0.96
MRPS35-202ENST00000536569 SYCP2Q9BX26 1530 aa21.06■□□□□ 0.96
MRPS35-202ENST00000536569 SPAG9O60271 1321 aaKnown RBP21.04■□□□□ 0.96
MRPS35-202ENST00000536569 HNRNPMP52272 730 aaKnown RBP eCLIP21.04■□□□□ 0.96
MRPS35-202ENST00000536569 TIAM1Q13009 1591 aa21.02■□□□□ 0.95
MRPS35-202ENST00000536569 PLPPR3Q6T4P5 718 aa21.01■□□□□ 0.95
MRPS35-202ENST00000536569 ILDR1Q86SU0 546 aaPredicted RBP21.01■□□□□ 0.95
MRPS35-202ENST00000536569 ESF1Q9H501 851 aaKnown RBP21■□□□□ 0.95
MRPS35-202ENST00000536569 CNTLNQ9NXG0 1405 aa20.99■□□□□ 0.95
MRPS35-202ENST00000536569 ATP7AQ04656 1500 aa20.99■□□□□ 0.95
MRPS35-202ENST00000536569 VPS8Q8N3P4 1428 aa20.98■□□□□ 0.95
MRPS35-202ENST00000536569 INO80Q9ULG1 1556 aaPredicted RBP20.97■□□□□ 0.95
MRPS35-202ENST00000536569 PREX1Q8TCU6 1659 aa20.97■□□□□ 0.95
MRPS35-202ENST00000536569 LOC105371045A0A1W2PR82 267 aa20.97■□□□□ 0.95
MRPS35-202ENST00000536569 SUPT6HQ7KZ85 1726 aaKnown RBP20.96■□□□□ 0.95
MRPS35-202ENST00000536569 CEBPAP49715 358 aaPredicted RBP20.96■□□□□ 0.95
MRPS35-202ENST00000536569 SETD1BQ9UPS6 1966 aaKnown RBP20.96■□□□□ 0.95
MRPS35-202ENST00000536569 MBD5Q9P267 1494 aa20.95■□□□□ 0.94
MRPS35-202ENST00000536569 HSPA2P54652 639 aa20.95■□□□□ 0.94
MRPS35-202ENST00000536569 NCOA2Q15596 1464 aa20.94■□□□□ 0.94
MRPS35-202ENST00000536569 RSPH4AQ5TD94 716 aa20.94■□□□□ 0.94
MRPS35-202ENST00000536569 RTEL1-TNFRSF6BF6WH68 1400 aa20.94■□□□□ 0.94
MRPS35-202ENST00000536569 A2MP01023 1474 aa20.94■□□□□ 0.94
MRPS35-202ENST00000536569 PLXNC1O60486 1568 aa20.93■□□□□ 0.94
MRPS35-202ENST00000536569 MAP3K1Q13233 1512 aa20.93■□□□□ 0.94
MRPS35-202ENST00000536569 ZNF644Q9H582 1327 aaPredicted RBP20.92■□□□□ 0.94
MRPS35-202ENST00000536569 UHRF1BP1Q6BDS2 1440 aa20.92■□□□□ 0.94
MRPS35-202ENST00000536569 C3P01024 1663 aa20.91■□□□□ 0.94
MRPS35-202ENST00000536569 PPP6R1Q9UPN7 881 aa20.91■□□□□ 0.94
MRPS35-202ENST00000536569 ADGBQ8N7X0 1667 aa20.89■□□□□ 0.94
MRPS35-202ENST00000536569 LRRC9Q6ZRR7 1453 aa20.89■□□□□ 0.94
MRPS35-202ENST00000536569 MROH2AA6NES4 1674 aa20.89■□□□□ 0.93
MRPS35-202ENST00000536569 CCDC141Q6ZP82 1450 aa20.87■□□□□ 0.93
MRPS35-202ENST00000536569 NPATQ14207 1427 aa20.87■□□□□ 0.93
MRPS35-202ENST00000536569 FBXO41Q8TF61 875 aa20.86■□□□□ 0.93
MRPS35-202ENST00000536569 CAMSAP2Q08AD1 1489 aa20.86■□□□□ 0.93
MRPS35-202ENST00000536569 DMRT2Q9Y5R5 561 aa20.85■□□□□ 0.93
MRPS35-202ENST00000536569 ZMYM3Q14202 1370 aa20.85■□□□□ 0.93
MRPS35-202ENST00000536569 DHX29Q7Z478 1369 aaKnown RBP20.85■□□□□ 0.93
MRPS35-202ENST00000536569 ARHGEF5Q12774 1597 aa20.82■□□□□ 0.92
MRPS35-202ENST00000536569 GGT6Q6P531 493 aa20.8■□□□□ 0.92
MRPS35-202ENST00000536569 MIA2Q96PC5 1412 aa20.79■□□□□ 0.92
MRPS35-202ENST00000536569 TSPY4P0CV99 314 aa20.79■□□□□ 0.92
MRPS35-202ENST00000536569 TSPY10P0CW01 314 aa20.79■□□□□ 0.92
MRPS35-202ENST00000536569 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
MRPS35-202ENST00000536569 CLTCQ00610 1675 aaKnown RBP20.77■□□□□ 0.92
MRPS35-202ENST00000536569 KANK4Q5T7N3 995 aaPredicted RBP20.77■□□□□ 0.92
MRPS35-202ENST00000536569 STRCQ7RTU9 1775 aa20.77■□□□□ 0.91
MRPS35-202ENST00000536569 MYOM3Q5VTT5 1437 aa20.76■□□□□ 0.91
MRPS35-202ENST00000536569 PTPRTO14522 1441 aa20.75■□□□□ 0.91
MRPS35-202ENST00000536569 APLP2Q06481 763 aa20.74■□□□□ 0.91
MRPS35-202ENST00000536569 PTPRKQ15262 1439 aa20.74■□□□□ 0.91
MRPS35-202ENST00000536569 MAST1Q9Y2H9 1570 aa20.72■□□□□ 0.91
MRPS35-202ENST00000536569 KIF3BO15066 747 aa20.72■□□□□ 0.91
MRPS35-202ENST00000536569 NCOA1Q15788 1441 aa20.71■□□□□ 0.91
MRPS35-202ENST00000536569 CERKQ8TCT0 537 aa20.71■□□□□ 0.91
MRPS35-202ENST00000536569 KDM5DQ9BY66 1539 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms