RNA–Protein interactions for RNA: ENST00000536566.5

RAB6A-204, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB6A, Length 1,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-204ENST00000536566 GPATCH8Q9UKJ3 1502 aaKnown RBP34.46■■■■□ 3.11
RAB6A-204ENST00000536566 ARHGAP5Q13017 1502 aa34.45■■■■□ 3.11
RAB6A-204ENST00000536566 SUPT6HQ7KZ85 1726 aaKnown RBP34.44■■■■□ 3.1
RAB6A-204ENST00000536566 CCNB3Q8WWL7 1395 aa34.44■■■■□ 3.1
RAB6A-204ENST00000536566 CDC42BPAQ5VT25 1732 aa34.43■■■■□ 3.1
RAB6A-204ENST00000536566 CDC42BPBQ9Y5S2 1711 aa34.42■■■■□ 3.1
RAB6A-204ENST00000536566 NCOA2Q15596 1464 aa34.42■■■■□ 3.1
RAB6A-204ENST00000536566 KANK4Q5T7N3 995 aaPredicted RBP34.42■■■■□ 3.1
RAB6A-204ENST00000536566 ADGRL1O94910 1474 aa34.39■■■■□ 3.1
RAB6A-204ENST00000536566 DENND4BO75064 1496 aaPredicted RBP34.39■■■■□ 3.1
RAB6A-204ENST00000536566 SCAPERQ9BY12 1400 aa34.34■■■■□ 3.09
RAB6A-204ENST00000536566 CFDP1Q9UEE9 299 aaPredicted RBP34.33■■■■□ 3.09
RAB6A-204ENST00000536566 ITSN2Q9NZM3 1697 aa34.33■■■■□ 3.09
RAB6A-204ENST00000536566 RAPGEF3O95398 923 aa34.31■■■■□ 3.08
RAB6A-204ENST00000536566 FRMPD1Q5SYB0 1578 aa34.3■■■■□ 3.08
RAB6A-204ENST00000536566 POGZQ7Z3K3 1410 aa34.3■■■■□ 3.08
RAB6A-204ENST00000536566 ABCC1P33527 1531 aa34.28■■■■□ 3.08
RAB6A-204ENST00000536566 RICTORQ6R327 1708 aa34.27■■■■□ 3.08
RAB6A-204ENST00000536566 PLEKHH2Q8IVE3 1493 aa34.27■■■■□ 3.08
RAB6A-204ENST00000536566 KIAA1107Q9UPP5 1409 aa34.25■■■■□ 3.07
RAB6A-204ENST00000536566 ZMYM4Q5VZL5 1548 aa34.24■■■■□ 3.07
RAB6A-204ENST00000536566 SAMD9LQ8IVG5 1584 aa34.23■■■■□ 3.07
RAB6A-204ENST00000536566 ZNF518AQ6AHZ1 1483 aa34.23■■■■□ 3.07
RAB6A-204ENST00000536566 MAGI2Q86UL8 1455 aa34.2■■■■□ 3.07
RAB6A-204ENST00000536566 ARHGEF12Q9NZN5 1544 aa34.2■■■■□ 3.06
RAB6A-204ENST00000536566 ZNF777Q9ULD5 760 aaPredicted RBP34.19■■■■□ 3.06
RAB6A-204ENST00000536566 MYOM3Q5VTT5 1437 aa34.19■■■■□ 3.06
RAB6A-204ENST00000536566 MIA2Q96PC5 1412 aa34.18■■■■□ 3.06
RAB6A-204ENST00000536566 KDM5CP41229 1560 aa34.17■■■■□ 3.06
RAB6A-204ENST00000536566 SYCP2Q9BX26 1530 aa34.13■■■■□ 3.05
RAB6A-204ENST00000536566 TRAPPC8Q9Y2L5 1435 aa34.13■■■■□ 3.05
RAB6A-204ENST00000536566 AFAP1Q8N556 730 aa34.11■■■■□ 3.05
RAB6A-204ENST00000536566 ZNF644Q9H582 1327 aaPredicted RBP34.09■■■■□ 3.05
RAB6A-204ENST00000536566 CAMSAP2Q08AD1 1489 aa34.08■■■■□ 3.05
RAB6A-204ENST00000536566 MLH3Q9UHC1 1453 aa34.08■■■■□ 3.05
RAB6A-204ENST00000536566 ARHGEF40Q8TER5 1519 aa34.08■■■■□ 3.05
RAB6A-204ENST00000536566 MBD5Q9P267 1494 aa34.07■■■■□ 3.05
RAB6A-204ENST00000536566 ZFYVE16Q7Z3T8 1539 aa34.06■■■■□ 3.04
RAB6A-204ENST00000536566 HNRNPMP52272 730 aaKnown RBP eCLIP34.06■■■■□ 3.045e-8■■□□□ 12.5
RAB6A-204ENST00000536566 RSPH4AQ5TD94 716 aa34.06■■■■□ 3.04
RAB6A-204ENST00000536566 HECW2Q9P2P5 1572 aa34.03■■■■□ 3.04
RAB6A-204ENST00000536566 FGD6Q6ZV73 1430 aa34.01■■■■□ 3.03
RAB6A-204ENST00000536566 YEATS2Q9ULM3 1422 aa34.01■■■■□ 3.03
RAB6A-204ENST00000536566 ARHGEF5Q12774 1597 aa33.98■■■■□ 3.03
RAB6A-204ENST00000536566 CCDC141Q6ZP82 1450 aa33.96■■■■□ 3.03
RAB6A-204ENST00000536566 ATP10AO60312 1499 aa33.95■■■■□ 3.03
RAB6A-204ENST00000536566 SPAG9O60271 1321 aaKnown RBP33.95■■■■□ 3.03
RAB6A-204ENST00000536566 TCOF1Q13428 1488 aaKnown RBP33.95■■■■□ 3.02
RAB6A-204ENST00000536566 RTEL1-TNFRSF6BF6WH68 1400 aa33.93■■■■□ 3.02
RAB6A-204ENST00000536566 PTPN23Q9H3S7 1636 aa33.93■■■■□ 3.02
RAB6A-204ENST00000536566 INO80Q9ULG1 1556 aaPredicted RBP33.91■■■■□ 3.02
RAB6A-204ENST00000536566 KIDINS220Q9ULH0 1771 aa33.9■■■■□ 3.02
RAB6A-204ENST00000536566 C9orf84Q5VXU9 1444 aa33.9■■■■□ 3.02
RAB6A-204ENST00000536566 REREQ9P2R6 1566 aa33.89■■■■□ 3.02
RAB6A-204ENST00000536566 DIP2CQ9Y2E4 1556 aa33.89■■■■□ 3.02
RAB6A-204ENST00000536566 ATP7AQ04656 1500 aa33.89■■■■□ 3.02
RAB6A-204ENST00000536566 MYT1LQ9UL68 1186 aa33.88■■■■□ 3.01
RAB6A-204ENST00000536566 ABCA6Q8N139 1617 aa33.86■■■■□ 3.01
RAB6A-204ENST00000536566 TSPY4P0CV99 314 aa33.83■■■■□ 3.01
RAB6A-204ENST00000536566 TSPY10P0CW01 314 aa33.83■■■■□ 3.01
RAB6A-204ENST00000536566 PPARGC1BQ86YN6 1023 aaKnown RBP33.8■■■■□ 3
RAB6A-204ENST00000536566 MAST1Q9Y2H9 1570 aa33.8■■■■□ 3
RAB6A-204ENST00000536566 SHANK2Q9UPX8 1470 aa33.77■■■■□ 3
RAB6A-204ENST00000536566 KDM4FA0A1W2PPD8 638 aa33.77■■■■□ 3
RAB6A-204ENST00000536566 AGLP35573 1532 aa33.77■■■■□ 3
RAB6A-204ENST00000536566 ARID4BQ4LE39 1312 aaPredicted RBP33.77■■■■□ 3
RAB6A-204ENST00000536566 ABCC5O15440 1437 aa33.76■■■□□ 2.99
RAB6A-204ENST00000536566 DNMT1P26358 1616 aaKnown RBP33.75■■■□□ 2.99
RAB6A-204ENST00000536566 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.75■■■□□ 2.993e-11■■■□□ 17
RAB6A-204ENST00000536566 DAPK1P53355 1430 aa33.74■■■□□ 2.99
RAB6A-204ENST00000536566 SIGLEC1Q9BZZ2 1709 aa33.73■■■□□ 2.99
RAB6A-204ENST00000536566 A2MP01023 1474 aa33.71■■■□□ 2.99
RAB6A-204ENST00000536566 BCORL1Q5H9F3 1711 aa33.71■■■□□ 2.99
RAB6A-204ENST00000536566 PLXNC1O60486 1568 aa33.71■■■□□ 2.99
RAB6A-204ENST00000536566 ADGBQ8N7X0 1667 aa33.71■■■□□ 2.99
RAB6A-204ENST00000536566 CROCC2H7BZ55 1655 aa33.69■■■□□ 2.98
RAB6A-204ENST00000536566 FAM50AQ14320 339 aaKnown RBP33.69■■■□□ 2.98
RAB6A-204ENST00000536566 RRBP1Q9P2E9 1410 aaKnown RBP33.68■■■□□ 2.98
RAB6A-204ENST00000536566 DHX29Q7Z478 1369 aaKnown RBP33.67■■■□□ 2.98
RAB6A-204ENST00000536566 ADAMTSL3P82987 1691 aa33.67■■■□□ 2.98
RAB6A-204ENST00000536566 ADGRL2O95490 1459 aa33.57■■■□□ 2.97
RAB6A-204ENST00000536566 ANKRD30AQ9BXX3 1397 aa33.55■■■□□ 2.96
RAB6A-204ENST00000536566 NCOA1Q15788 1441 aa33.53■■■□□ 2.96
RAB6A-204ENST00000536566 DUOX2Q9NRD8 1548 aa33.53■■■□□ 2.96
RAB6A-204ENST00000536566 MADDQ8WXG6 1647 aa33.53■■■□□ 2.96
RAB6A-204ENST00000536566 MLECQ14165 292 aa33.53■■■□□ 2.96
RAB6A-204ENST00000536566 KIF15Q9NS87 1388 aa33.52■■■□□ 2.96
RAB6A-204ENST00000536566 PPP6R1Q9UPN7 881 aa33.5■■■□□ 2.95
RAB6A-204ENST00000536566 PTPRKQ15262 1439 aa33.49■■■□□ 2.95
RAB6A-204ENST00000536566 ROCK1Q13464 1354 aa33.47■■■□□ 2.95
RAB6A-204ENST00000536566 ERBINQ96RT1 1412 aa33.47■■■□□ 2.95
RAB6A-204ENST00000536566 EIF2AK4Q9P2K8 1649 aaKnown RBP33.47■■■□□ 2.95
RAB6A-204ENST00000536566 CHIC2Q9UKJ5 165 aa33.47■■■□□ 2.95
RAB6A-204ENST00000536566 PTPRMP28827 1452 aa33.47■■■□□ 2.95
RAB6A-204ENST00000536566 RRP7BPQ9NSQ0 103 aa33.45■■■□□ 2.95
RAB6A-204ENST00000536566 FER1L4A9Z1Z3 1794 aa33.44■■■□□ 2.94
RAB6A-204ENST00000536566 CNTLNQ9NXG0 1405 aa33.44■■■□□ 2.94
RAB6A-204ENST00000536566 KIF3BO15066 747 aa33.43■■■□□ 2.94
RAB6A-204ENST00000536566 FAM135AQ9P2D6 1515 aa33.42■■■□□ 2.94
RAB6A-204ENST00000536566 RIMS1Q86UR5 1692 aaKnown RBP33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms