RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 PREX2Q70Z35 1606 aa31.26■■■□□ 2.59
PDXDC1-205ENST00000535621 PTPRKQ15262 1439 aa31.25■■■□□ 2.59
PDXDC1-205ENST00000535621 SETD5Q9C0A6 1442 aa31.24■■■□□ 2.59
PDXDC1-205ENST00000535621 ZNF777Q9ULD5 760 aaPredicted RBP31.24■■■□□ 2.59
PDXDC1-205ENST00000535621 MYO5CQ9NQX4 1742 aa31.24■■■□□ 2.59
PDXDC1-205ENST00000535621 RAB3GAP2Q9H2M9 1393 aa31.22■■■□□ 2.59
PDXDC1-205ENST00000535621 CAMSAP2Q08AD1 1489 aa31.22■■■□□ 2.59
PDXDC1-205ENST00000535621 DHX57Q6P158 1386 aaKnown RBP31.17■■■□□ 2.58
PDXDC1-205ENST00000535621 ARHGAP5Q13017 1502 aa31.15■■■□□ 2.58
PDXDC1-205ENST00000535621 ABCA9Q8IUA7 1624 aa31.14■■■□□ 2.58
PDXDC1-205ENST00000535621 SAMD9LQ8IVG5 1584 aa31.14■■■□□ 2.58
PDXDC1-205ENST00000535621 MAPKBP1O60336 1514 aa31.12■■■□□ 2.57
PDXDC1-205ENST00000535621 HFM1A2PYH4 1435 aa31.11■■■□□ 2.57
PDXDC1-205ENST00000535621 DNMT1P26358 1616 aaKnown RBP31.11■■■□□ 2.57
PDXDC1-205ENST00000535621 PLCH2O75038 1416 aa31.09■■■□□ 2.57
PDXDC1-205ENST00000535621 CHIC2Q9UKJ5 165 aa31.08■■■□□ 2.57
PDXDC1-205ENST00000535621 DAPK1P53355 1430 aa31.08■■■□□ 2.57
PDXDC1-205ENST00000535621 ABCC5O15440 1437 aa31.07■■■□□ 2.57
PDXDC1-205ENST00000535621 CLSPNQ9HAW4 1339 aa31.06■■■□□ 2.56
PDXDC1-205ENST00000535621 NAIPQ13075 1403 aa31.04■■■□□ 2.56
PDXDC1-205ENST00000535621 CROCC2H7BZ55 1655 aa31.02■■■□□ 2.56
PDXDC1-205ENST00000535621 HNRNPMP52272 730 aaKnown RBP eCLIP31.02■■■□□ 2.56
PDXDC1-205ENST00000535621 AKNAQ7Z591 1439 aa31.01■■■□□ 2.56
PDXDC1-205ENST00000535621 SYCP2Q9BX26 1530 aa31.01■■■□□ 2.55
PDXDC1-205ENST00000535621 MBD5Q9P267 1494 aa30.98■■■□□ 2.55
PDXDC1-205ENST00000535621 RRP7BPQ9NSQ0 103 aa30.97■■■□□ 2.55
PDXDC1-205ENST00000535621 ARHGEF12Q9NZN5 1544 aa30.96■■■□□ 2.55
PDXDC1-205ENST00000535621 GCC2Q8IWJ2 1684 aa30.96■■■□□ 2.55
PDXDC1-205ENST00000535621 ARAP3Q8WWN8 1544 aa30.95■■■□□ 2.55
PDXDC1-205ENST00000535621 EFCAB2Q5VUJ9 269 aa30.95■■■□□ 2.54
PDXDC1-205ENST00000535621 ROCK1Q13464 1354 aa30.94■■■□□ 2.54
PDXDC1-205ENST00000535621 FANCAO15360 1455 aa30.93■■■□□ 2.54
PDXDC1-205ENST00000535621 ARHGEF5Q12774 1597 aa30.93■■■□□ 2.54
PDXDC1-205ENST00000535621 CD109Q6YHK3 1445 aa30.92■■■□□ 2.54
PDXDC1-205ENST00000535621 DIP2BQ9P265 1576 aa30.92■■■□□ 2.54
PDXDC1-205ENST00000535621 ABCC1P33527 1531 aa30.92■■■□□ 2.54
PDXDC1-205ENST00000535621 ADGBQ8N7X0 1667 aa30.89■■■□□ 2.54
PDXDC1-205ENST00000535621 KDM6BO15054 1643 aa30.88■■■□□ 2.53
PDXDC1-205ENST00000535621 MAP3K4Q9Y6R4 1608 aa30.88■■■□□ 2.53
PDXDC1-205ENST00000535621 CCDC141Q6ZP82 1450 aa30.87■■■□□ 2.53
PDXDC1-205ENST00000535621 DNAJC5Q9H3Z4 198 aa30.86■■■□□ 2.53
PDXDC1-205ENST00000535621 KIAA1107Q9UPP5 1409 aa30.85■■■□□ 2.53
PDXDC1-205ENST00000535621 GLI2P10070 1586 aa30.85■■■□□ 2.53
PDXDC1-205ENST00000535621 C9orf84Q5VXU9 1444 aa30.84■■■□□ 2.53
PDXDC1-205ENST00000535621 PLEKHH2Q8IVE3 1493 aa30.84■■■□□ 2.53
PDXDC1-205ENST00000535621 FAM69CQ0P6D2 419 aa30.84■■■□□ 2.53
PDXDC1-205ENST00000535621 TRAPPC8Q9Y2L5 1435 aa30.83■■■□□ 2.53
PDXDC1-205ENST00000535621 SHANK2Q9UPX8 1470 aa30.82■■■□□ 2.52
PDXDC1-205ENST00000535621 TSPOAP1O95153 1857 aa30.82■■■□□ 2.52
PDXDC1-205ENST00000535621 KIF13AQ9H1H9 1805 aa30.82■■■□□ 2.52
PDXDC1-205ENST00000535621 ADGRL2O95490 1459 aa30.8■■■□□ 2.52
PDXDC1-205ENST00000535621 NCOA1Q15788 1441 aa30.8■■■□□ 2.52
PDXDC1-205ENST00000535621 ADGRL1O94910 1474 aa30.79■■■□□ 2.52
PDXDC1-205ENST00000535621 TSPY4P0CV99 314 aa30.77■■■□□ 2.52
PDXDC1-205ENST00000535621 TSPY10P0CW01 314 aa30.77■■■□□ 2.52
PDXDC1-205ENST00000535621 AFAP1Q8N556 730 aa30.75■■■□□ 2.51
PDXDC1-205ENST00000535621 SCAPERQ9BY12 1400 aa30.75■■■□□ 2.51
PDXDC1-205ENST00000535621 PPRC1Q5VV67 1664 aaKnown RBP30.74■■■□□ 2.51
PDXDC1-205ENST00000535621 CFAP74Q9C0B2 1584 aa30.73■■■□□ 2.51
PDXDC1-205ENST00000535621 ANKRD30AQ9BXX3 1397 aa30.73■■■□□ 2.51
PDXDC1-205ENST00000535621 RSPH4AQ5TD94 716 aa30.72■■■□□ 2.51
PDXDC1-205ENST00000535621 MAST1Q9Y2H9 1570 aa30.72■■■□□ 2.51
PDXDC1-205ENST00000535621 ACIN1Q9UKV3 1341 aaKnown RBP30.66■■■□□ 2.5
PDXDC1-205ENST00000535621 KIF15Q9NS87 1388 aa30.66■■■□□ 2.5
PDXDC1-205ENST00000535621 NEO1Q92859 1461 aa30.65■■■□□ 2.5
PDXDC1-205ENST00000535621 ZFYVE16Q7Z3T8 1539 aa30.63■■■□□ 2.49
PDXDC1-205ENST00000535621 TRIM52Q96A61 297 aa30.62■■■□□ 2.49
PDXDC1-205ENST00000535621 PLXNC1O60486 1568 aa30.62■■■□□ 2.49
PDXDC1-205ENST00000535621 SPAG9O60271 1321 aaKnown RBP30.61■■■□□ 2.49
PDXDC1-205ENST00000535621 ANKRD50Q9ULJ7 1429 aa30.6■■■□□ 2.49
PDXDC1-205ENST00000535621 INO80Q9ULG1 1556 aaPredicted RBP30.6■■■□□ 2.49
PDXDC1-205ENST00000535621 DENND4BO75064 1496 aaPredicted RBP30.59■■■□□ 2.49
PDXDC1-205ENST00000535621 POGZQ7Z3K3 1410 aa30.58■■■□□ 2.49
PDXDC1-205ENST00000535621 ATP7AQ04656 1500 aa30.57■■■□□ 2.48
PDXDC1-205ENST00000535621 SIN3AQ96ST3 1273 aa30.57■■■□□ 2.48
PDXDC1-205ENST00000535621 RAPGEF3O95398 923 aa30.56■■■□□ 2.48
PDXDC1-205ENST00000535621 ZNF518AQ6AHZ1 1483 aa30.56■■■□□ 2.48
PDXDC1-205ENST00000535621 KIDINS220Q9ULH0 1771 aa30.55■■■□□ 2.48
PDXDC1-205ENST00000535621 RICTORQ6R327 1708 aa30.54■■■□□ 2.48
PDXDC1-205ENST00000535621 MPHOSPH9Q99550 1183 aa30.54■■■□□ 2.48
PDXDC1-205ENST00000535621 KDM5CP41229 1560 aa30.53■■■□□ 2.48
PDXDC1-205ENST00000535621 MYT1LQ9UL68 1186 aa30.51■■■□□ 2.47
PDXDC1-205ENST00000535621 RTEL1-TNFRSF6BF6WH68 1400 aa30.51■■■□□ 2.47
PDXDC1-205ENST00000535621 NEUROD1Q13562 356 aa30.49■■■□□ 2.47
PDXDC1-205ENST00000535621 FRMPD1Q5SYB0 1578 aa30.49■■■□□ 2.47
PDXDC1-205ENST00000535621 TEX14Q8IWB6 1497 aa30.49■■■□□ 2.47
PDXDC1-205ENST00000535621 DUOX2Q9NRD8 1548 aa30.48■■■□□ 2.47
PDXDC1-205ENST00000535621 HECW2Q9P2P5 1572 aa30.46■■■□□ 2.47
PDXDC1-205ENST00000535621 TIMELESSQ9UNS1 1208 aa30.46■■■□□ 2.47
PDXDC1-205ENST00000535621 PZPP20742 1482 aa30.45■■■□□ 2.46
PDXDC1-205ENST00000535621 ABCA6Q8N139 1617 aa30.41■■■□□ 2.46
PDXDC1-205ENST00000535621 TRHP20396 242 aaPredicted RBP30.41■■■□□ 2.46
PDXDC1-205ENST00000535621 SLC4A1APQ9BWU0 796 aaKnown RBP30.41■■■□□ 2.46
PDXDC1-205ENST00000535621 MLH3Q9UHC1 1453 aa30.4■■■□□ 2.46
PDXDC1-205ENST00000535621 COL17A1Q9UMD9 1497 aaPredicted RBP30.4■■■□□ 2.46
PDXDC1-205ENST00000535621 ERBINQ96RT1 1412 aa30.38■■■□□ 2.45
PDXDC1-205ENST00000535621 FOXD1Q16676 465 aa30.38■■■□□ 2.45
PDXDC1-205ENST00000535621 KDM5DQ9BY66 1539 aa30.36■■■□□ 2.45
PDXDC1-205ENST00000535621 NUP155O75694 1391 aa30.36■■■□□ 2.45
PDXDC1-205ENST00000535621 UNC13BO14795 1591 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms