RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 LRRC9Q6ZRR7 1453 aa20.86■□□□□ 0.93
CHFR-210ENST00000535527 SUPT6HQ7KZ85 1726 aaKnown RBP20.85■□□□□ 0.93
CHFR-210ENST00000535527 KANK4Q5T7N3 995 aaPredicted RBP20.83■□□□□ 0.93
CHFR-210ENST00000535527 RICTORQ6R327 1708 aa20.82■□□□□ 0.92
CHFR-210ENST00000535527 CFAP74Q9C0B2 1584 aa20.81■□□□□ 0.92
CHFR-210ENST00000535527 PLCH2O75038 1416 aa20.81■□□□□ 0.92
CHFR-210ENST00000535527 MTUS2Q5JR59 1369 aa20.81■□□□□ 0.92
CHFR-210ENST00000535527 NCOA2Q15596 1464 aa20.8■□□□□ 0.92
CHFR-210ENST00000535527 SAMD9LQ8IVG5 1584 aa20.8■□□□□ 0.92
CHFR-210ENST00000535527 GPATCH8Q9UKJ3 1502 aaKnown RBP20.79■□□□□ 0.92
CHFR-210ENST00000535527 RAPGEF3O95398 923 aa20.79■□□□□ 0.92
CHFR-210ENST00000535527 CDK11AQ9UQ88 783 aaPredicted RBP20.79■□□□□ 0.92
CHFR-210ENST00000535527 FANCAO15360 1455 aa20.79■□□□□ 0.92
CHFR-210ENST00000535527 NEO1Q92859 1461 aa20.79■□□□□ 0.92
CHFR-210ENST00000535527 ITSN2Q9NZM3 1697 aa20.79■□□□□ 0.92
CHFR-210ENST00000535527 BCORL1Q5H9F3 1711 aa20.77■□□□□ 0.92
CHFR-210ENST00000535527 ARHGAP5Q13017 1502 aa20.77■□□□□ 0.92
CHFR-210ENST00000535527 LMTK3Q96Q04 1460 aa20.75■□□□□ 0.91
CHFR-210ENST00000535527 ABCC1P33527 1531 aa20.75■□□□□ 0.91
CHFR-210ENST00000535527 ARID4BQ4LE39 1312 aaPredicted RBP20.75■□□□□ 0.91
CHFR-210ENST00000535527 ARHGEF12Q9NZN5 1544 aa20.74■□□□□ 0.91
CHFR-210ENST00000535527 AKNAQ7Z591 1439 aa20.72■□□□□ 0.91
CHFR-210ENST00000535527 MADDQ8WXG6 1647 aa20.71■□□□□ 0.91
CHFR-210ENST00000535527 SYCP2Q9BX26 1530 aa20.68■□□□□ 0.9
CHFR-210ENST00000535527 SIGLEC1Q9BZZ2 1709 aa20.68■□□□□ 0.9
CHFR-210ENST00000535527 ZMYM4Q5VZL5 1548 aa20.66■□□□□ 0.9
CHFR-210ENST00000535527 KDM5CP41229 1560 aa20.65■□□□□ 0.9
CHFR-210ENST00000535527 POGZQ7Z3K3 1410 aa20.65■□□□□ 0.9
CHFR-210ENST00000535527 CCNB3Q8WWL7 1395 aa20.65■□□□□ 0.9
CHFR-210ENST00000535527 CERKQ8TCT0 537 aa20.63■□□□□ 0.89
CHFR-210ENST00000535527 DENND4BO75064 1496 aaPredicted RBP20.62■□□□□ 0.89
CHFR-210ENST00000535527 SCAPERQ9BY12 1400 aa20.62■□□□□ 0.89
CHFR-210ENST00000535527 TRAPPC8Q9Y2L5 1435 aa20.62■□□□□ 0.89
CHFR-210ENST00000535527 RIMS1Q86UR5 1692 aaKnown RBP20.62■□□□□ 0.89
CHFR-210ENST00000535527 ARHGEF40Q8TER5 1519 aa20.62■□□□□ 0.89
CHFR-210ENST00000535527 CAMSAP2Q08AD1 1489 aa20.62■□□□□ 0.89
CHFR-210ENST00000535527 ZNF644Q9H582 1327 aaPredicted RBP20.61■□□□□ 0.89
CHFR-210ENST00000535527 MYOM3Q5VTT5 1437 aa20.61■□□□□ 0.89
CHFR-210ENST00000535527 HSPA2P54652 639 aa20.6■□□□□ 0.89
CHFR-210ENST00000535527 KIDINS220Q9ULH0 1771 aa20.59■□□□□ 0.89
CHFR-210ENST00000535527 ABCA6Q8N139 1617 aa20.59■□□□□ 0.89
CHFR-210ENST00000535527 PTPN23Q9H3S7 1636 aa20.58■□□□□ 0.89
CHFR-210ENST00000535527 EFCAB2Q5VUJ9 269 aa20.58■□□□□ 0.89
CHFR-210ENST00000535527 MBD5Q9P267 1494 aa20.57■□□□□ 0.88
CHFR-210ENST00000535527 PPARGC1BQ86YN6 1023 aaKnown RBP20.57■□□□□ 0.88
CHFR-210ENST00000535527 INO80Q9ULG1 1556 aaPredicted RBP20.57■□□□□ 0.88
CHFR-210ENST00000535527 YEATS2Q9ULM3 1422 aa20.56■□□□□ 0.88
CHFR-210ENST00000535527 CROCC2H7BZ55 1655 aa20.55■□□□□ 0.88
CHFR-210ENST00000535527 DIP2CQ9Y2E4 1556 aa20.55■□□□□ 0.88
CHFR-210ENST00000535527 CFDP1Q9UEE9 299 aaPredicted RBP20.53■□□□□ 0.88
CHFR-210ENST00000535527 ZNF777Q9ULD5 760 aaPredicted RBP20.53■□□□□ 0.88
CHFR-210ENST00000535527 ZNF518AQ6AHZ1 1483 aa20.53■□□□□ 0.88
CHFR-210ENST00000535527 MAGI2Q86UL8 1455 aa20.53■□□□□ 0.88
CHFR-210ENST00000535527 ZFYVE16Q7Z3T8 1539 aa20.53■□□□□ 0.88
CHFR-210ENST00000535527 FGD6Q6ZV73 1430 aa20.53■□□□□ 0.88
CHFR-210ENST00000535527 ARHGEF5Q12774 1597 aa20.52■□□□□ 0.88
CHFR-210ENST00000535527 APLP2Q06481 763 aa20.52■□□□□ 0.88
CHFR-210ENST00000535527 KIAA1107Q9UPP5 1409 aa20.52■□□□□ 0.87
CHFR-210ENST00000535527 TCOF1Q13428 1488 aaKnown RBP20.51■□□□□ 0.87
CHFR-210ENST00000535527 ADGBQ8N7X0 1667 aa20.51■□□□□ 0.87
CHFR-210ENST00000535527 MIA2Q96PC5 1412 aa20.5■□□□□ 0.87
CHFR-210ENST00000535527 PLEKHH2Q8IVE3 1493 aa20.5■□□□□ 0.87
CHFR-210ENST00000535527 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
CHFR-210ENST00000535527 AFAP1Q8N556 730 aa20.49■□□□□ 0.87
CHFR-210ENST00000535527 HNRNPMP52272 730 aaKnown RBP eCLIP20.48■□□□□ 0.87
CHFR-210ENST00000535527 DNMT1P26358 1616 aaKnown RBP20.48■□□□□ 0.87
CHFR-210ENST00000535527 ATP7AQ04656 1500 aa20.48■□□□□ 0.87
CHFR-210ENST00000535527 SOCS7O14512 581 aa20.47■□□□□ 0.87
CHFR-210ENST00000535527 DMRT2Q9Y5R5 561 aa20.47■□□□□ 0.87
CHFR-210ENST00000535527 MLH3Q9UHC1 1453 aa20.46■□□□□ 0.87
CHFR-210ENST00000535527 CCDC141Q6ZP82 1450 aa20.45■□□□□ 0.86
CHFR-210ENST00000535527 DISP3Q9P2K9 1392 aa20.45■□□□□ 0.86
CHFR-210ENST00000535527 FER1L4A9Z1Z3 1794 aa20.44■□□□□ 0.86
CHFR-210ENST00000535527 MAST1Q9Y2H9 1570 aa20.43■□□□□ 0.86
CHFR-210ENST00000535527 MLECQ14165 292 aa20.43■□□□□ 0.86
CHFR-210ENST00000535527 ILDR2Q71H61 639 aa20.42■□□□□ 0.86
CHFR-210ENST00000535527 PLXNC1O60486 1568 aa20.41■□□□□ 0.86
CHFR-210ENST00000535527 REREQ9P2R6 1566 aa20.41■□□□□ 0.86
CHFR-210ENST00000535527 PREX1Q8TCU6 1659 aa20.39■□□□□ 0.86
CHFR-210ENST00000535527 ABCC5O15440 1437 aa20.39■□□□□ 0.85
CHFR-210ENST00000535527 ATP10AO60312 1499 aa20.38■□□□□ 0.85
CHFR-210ENST00000535527 DAPK1P53355 1430 aa20.36■□□□□ 0.85
CHFR-210ENST00000535527 C9orf84Q5VXU9 1444 aa20.36■□□□□ 0.85
CHFR-210ENST00000535527 PTPRKQ15262 1439 aa20.35■□□□□ 0.85
CHFR-210ENST00000535527 RRBP1Q9P2E9 1410 aaKnown RBP20.35■□□□□ 0.85
CHFR-210ENST00000535527 SETD1BQ9UPS6 1966 aaKnown RBP20.34■□□□□ 0.85
CHFR-210ENST00000535527 SHANK2Q9UPX8 1470 aa20.34■□□□□ 0.85
CHFR-210ENST00000535527 SPAG9O60271 1321 aaKnown RBP20.32■□□□□ 0.84
CHFR-210ENST00000535527 STRCQ7RTU9 1775 aa20.32■□□□□ 0.84
CHFR-210ENST00000535527 RTEL1-TNFRSF6BF6WH68 1400 aa20.31■□□□□ 0.84
CHFR-210ENST00000535527 UHRF1BP1Q6BDS2 1440 aa20.31■□□□□ 0.84
CHFR-210ENST00000535527 CEBPAP49715 358 aaPredicted RBP20.31■□□□□ 0.84
CHFR-210ENST00000535527 PTPRTO14522 1441 aa20.29■□□□□ 0.84
CHFR-210ENST00000535527 AGLP35573 1532 aa20.29■□□□□ 0.84
CHFR-210ENST00000535527 A2MP01023 1474 aa20.28■□□□□ 0.84
CHFR-210ENST00000535527 ADGRL2O95490 1459 aa20.26■□□□□ 0.83
CHFR-210ENST00000535527 MROH1Q8NDA8 1641 aa20.26■□□□□ 0.83
CHFR-210ENST00000535527 FAM50AQ14320 339 aaKnown RBP20.24■□□□□ 0.83
CHFR-210ENST00000535527 SPATA31D1Q6ZQQ2 1576 aa20.24■□□□□ 0.83
CHFR-210ENST00000535527 IQSEC2Q5JU85 1478 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms