RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 GRIN2BQ13224 1484 aa18.98■□□□□ 0.63
LPCAT3-203ENST00000535479 EFCAB5A4FU69 1503 aa18.97■□□□□ 0.63
LPCAT3-203ENST00000535479 PRDM2Q13029 1718 aa18.96■□□□□ 0.63
LPCAT3-203ENST00000535479 CTTNBP2Q8WZ74 1663 aa18.96■□□□□ 0.63
LPCAT3-203ENST00000535479 CCDC136Q96JN2 1154 aa18.94■□□□□ 0.62
LPCAT3-203ENST00000535479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.94■□□□□ 0.62
LPCAT3-203ENST00000535479 PKD2Q13563 968 aa18.93■□□□□ 0.62
LPCAT3-203ENST00000535479 THOC2Q8NI27 1593 aaKnown RBP18.92■□□□□ 0.62
LPCAT3-203ENST00000535479 SUPT6HQ7KZ85 1726 aaKnown RBP18.92■□□□□ 0.62
LPCAT3-203ENST00000535479 RGL3Q3MIN7 710 aa18.9■□□□□ 0.62
LPCAT3-203ENST00000535479 UGGT2Q9NYU1 1516 aa18.89■□□□□ 0.61
LPCAT3-203ENST00000535479 ZBED9Q6R2W3 1325 aa18.89■□□□□ 0.61
LPCAT3-203ENST00000535479 FANCIQ9NVI1 1328 aa18.89■□□□□ 0.61
LPCAT3-203ENST00000535479 DEKP35659 375 aaKnown RBP18.89■□□□□ 0.61
LPCAT3-203ENST00000535479 TMC1Q8TDI8 760 aa18.89■□□□□ 0.61
LPCAT3-203ENST00000535479 CFDP1Q9UEE9 299 aaPredicted RBP18.88■□□□□ 0.61
LPCAT3-203ENST00000535479 NCOA1Q15788 1441 aa18.88■□□□□ 0.61
LPCAT3-203ENST00000535479 EPRSP07814 1512 aaKnown RBP18.87■□□□□ 0.61
LPCAT3-203ENST00000535479 ANKRD30BQ9BXX2 1392 aa18.87■□□□□ 0.61
LPCAT3-203ENST00000535479 PLIN1O60240 522 aa18.86■□□□□ 0.61
LPCAT3-203ENST00000535479 EHBP1L1Q8N3D4 1523 aa18.85■□□□□ 0.61
LPCAT3-203ENST00000535479 ST20-MTHFSA0A0A6YYL1 179 aa18.84■□□□□ 0.61
LPCAT3-203ENST00000535479 CARD11Q9BXL7 1154 aa18.84■□□□□ 0.61
LPCAT3-203ENST00000535479 PRG4Q92954 1404 aaPredicted RBP18.84■□□□□ 0.61
LPCAT3-203ENST00000535479 CUL7Q14999 1698 aa18.84■□□□□ 0.61
LPCAT3-203ENST00000535479 LAMC3Q9Y6N6 1575 aa18.83■□□□□ 0.6
LPCAT3-203ENST00000535479 DCAF11Q8TEB1 546 aa18.83■□□□□ 0.6
LPCAT3-203ENST00000535479 USP47Q96K76 1375 aa18.82■□□□□ 0.6
LPCAT3-203ENST00000535479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.82■□□□□ 0.6
LPCAT3-203ENST00000535479 LAS1LQ9Y4W2 734 aaKnown RBP18.82■□□□□ 0.6
LPCAT3-203ENST00000535479 SAMD9Q5K651 1589 aa18.82■□□□□ 0.6
LPCAT3-203ENST00000535479 ABCC5O15440 1437 aa18.81■□□□□ 0.6
LPCAT3-203ENST00000535479 EXOC6Q8TAG9 804 aa18.81■□□□□ 0.6
LPCAT3-203ENST00000535479 NOP58Q9Y2X3 529 aaKnown RBP18.81■□□□□ 0.6
LPCAT3-203ENST00000535479 DAPK1P53355 1430 aa18.8■□□□□ 0.6
LPCAT3-203ENST00000535479 CDCA7LQ96GN5 454 aa18.8■□□□□ 0.6
LPCAT3-203ENST00000535479 CC2D1BQ5T0F9 858 aaKnown RBP18.8■□□□□ 0.6
LPCAT3-203ENST00000535479 RTN4Q9NQC3 1192 aaKnown RBP18.79■□□□□ 0.6
LPCAT3-203ENST00000535479 NUDCQ9Y266 331 aa18.78■□□□□ 0.6
LPCAT3-203ENST00000535479 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
LPCAT3-203ENST00000535479 HNRNPMP52272 730 aaKnown RBP eCLIP18.77■□□□□ 0.59
LPCAT3-203ENST00000535479 DHX29Q7Z478 1369 aaKnown RBP18.75■□□□□ 0.59
LPCAT3-203ENST00000535479 TEX14Q8IWB6 1497 aa18.75■□□□□ 0.59
LPCAT3-203ENST00000535479 RPRD2Q5VT52 1461 aaKnown RBP18.75■□□□□ 0.59
LPCAT3-203ENST00000535479 PNISRQ8TF01 805 aaKnown RBP18.73■□□□□ 0.59
LPCAT3-203ENST00000535479 ABCA5Q8WWZ7 1642 aa18.73■□□□□ 0.59
LPCAT3-203ENST00000535479 NBPF1Q3BBV0 1214 aa18.72■□□□□ 0.59
LPCAT3-203ENST00000535479 SPATA31E1Q6ZUB1 1445 aa18.72■□□□□ 0.59
LPCAT3-203ENST00000535479 NUP155O75694 1391 aa18.71■□□□□ 0.59
LPCAT3-203ENST00000535479 KIF21AQ7Z4S6 1674 aa18.71■□□□□ 0.59
LPCAT3-203ENST00000535479 HECW1Q76N89 1606 aa18.7■□□□□ 0.58
LPCAT3-203ENST00000535479 ARHGEF11O15085 1522 aa18.7■□□□□ 0.58
LPCAT3-203ENST00000535479 BCORL1Q5H9F3 1711 aa18.7■□□□□ 0.58
LPCAT3-203ENST00000535479 PLB1Q6P1J6 1458 aa18.7■□□□□ 0.58
LPCAT3-203ENST00000535479 SLC4A3P48751 1232 aa18.7■□□□□ 0.58
LPCAT3-203ENST00000535479 TCOF1Q13428 1488 aaKnown RBP18.69■□□□□ 0.58
LPCAT3-203ENST00000535479 ANP32AP39687 249 aaKnown RBP18.68■□□□□ 0.58
LPCAT3-203ENST00000535479 CHMP7Q8WUX9 453 aaPredicted RBP18.68■□□□□ 0.58
LPCAT3-203ENST00000535479 IQGAP2Q13576 1575 aa18.67■□□□□ 0.58
LPCAT3-203ENST00000535479 ZBTB47Q9UFB7 747 aaPredicted RBP18.67■□□□□ 0.58
LPCAT3-203ENST00000535479 GCC2Q8IWJ2 1684 aa18.66■□□□□ 0.58
LPCAT3-203ENST00000535479 PZPP20742 1482 aa18.66■□□□□ 0.58
LPCAT3-203ENST00000535479 NUP153P49790 1475 aaKnown RBP18.65■□□□□ 0.58
LPCAT3-203ENST00000535479 WDR62O43379 1518 aa18.64■□□□□ 0.57
LPCAT3-203ENST00000535479 SENP3Q9H4L4 574 aaPredicted RBP18.63■□□□□ 0.57
LPCAT3-203ENST00000535479 SMG6Q86US8 1419 aaKnown RBP18.62■□□□□ 0.57
LPCAT3-203ENST00000535479 C20orf194Q5TEA3 1177 aa18.62■□□□□ 0.57
LPCAT3-203ENST00000535479 MIA2Q96PC5 1412 aa18.62■□□□□ 0.57
LPCAT3-203ENST00000535479 IPO9Q96P70 1041 aaKnown RBP18.61■□□□□ 0.57
LPCAT3-203ENST00000535479 RCAN3Q9UKA8 241 aa18.6■□□□□ 0.57
LPCAT3-203ENST00000535479 RRP1P56182 461 aaKnown RBP18.6■□□□□ 0.57
LPCAT3-203ENST00000535479 IL27Q8NEV9 243 aa18.6■□□□□ 0.57
LPCAT3-203ENST00000535479 CAMSAP2Q08AD1 1489 aa18.59■□□□□ 0.57
LPCAT3-203ENST00000535479 ERICH6BQ5W0A0 696 aa18.59■□□□□ 0.57
LPCAT3-203ENST00000535479 ROCK2O75116 1388 aaKnown RBP18.58■□□□□ 0.57
LPCAT3-203ENST00000535479 RTL5Q5HYW3 569 aaPredicted RBP18.58■□□□□ 0.56
LPCAT3-203ENST00000535479 TARBP1Q13395 1621 aaKnown RBP18.57■□□□□ 0.56
LPCAT3-203ENST00000535479 KIF14Q15058 1648 aa18.56■□□□□ 0.56
LPCAT3-203ENST00000535479 DISP1Q96F81 1524 aa18.56■□□□□ 0.56
LPCAT3-203ENST00000535479 ANKRD50Q9ULJ7 1429 aa18.56■□□□□ 0.56
LPCAT3-203ENST00000535479 KIAA1107Q9UPP5 1409 aa18.56■□□□□ 0.56
LPCAT3-203ENST00000535479 TSPY4P0CV99 314 aa18.56■□□□□ 0.56
LPCAT3-203ENST00000535479 TSPY10P0CW01 314 aa18.56■□□□□ 0.56
LPCAT3-203ENST00000535479 CRBNQ96SW2 442 aa18.55■□□□□ 0.56
LPCAT3-203ENST00000535479 PLEKHD1A6NEE1 506 aa18.54■□□□□ 0.56
LPCAT3-203ENST00000535479 PDE4AP27815 886 aa18.53■□□□□ 0.56
LPCAT3-203ENST00000535479 PANK3Q9H999 370 aa18.53■□□□□ 0.56
LPCAT3-203ENST00000535479 JPH4Q96JJ6 628 aa18.53■□□□□ 0.56
LPCAT3-203ENST00000535479 NEFMP07197 916 aa18.52■□□□□ 0.56
LPCAT3-203ENST00000535479 GPATCH8Q9UKJ3 1502 aaKnown RBP18.52■□□□□ 0.56
LPCAT3-203ENST00000535479 PBRM1Q86U86 1689 aa18.52■□□□□ 0.55
LPCAT3-203ENST00000535479 ROCK1Q13464 1354 aa18.52■□□□□ 0.55
LPCAT3-203ENST00000535479 MYBBP1AQ9BQG0 1328 aaKnown RBP18.51■□□□□ 0.55
LPCAT3-203ENST00000535479 DNMT1P26358 1616 aaKnown RBP18.51■□□□□ 0.55
LPCAT3-203ENST00000535479 CCDC146Q8IYE0 955 aa18.51■□□□□ 0.55
LPCAT3-203ENST00000535479 ANKRD30AQ9BXX3 1397 aa18.5■□□□□ 0.55
LPCAT3-203ENST00000535479 ADAMTS12P58397 1594 aa18.49■□□□□ 0.55
LPCAT3-203ENST00000535479 KIF15Q9NS87 1388 aa18.48■□□□□ 0.55
LPCAT3-203ENST00000535479 RGS3P49796 1198 aa18.48■□□□□ 0.55
LPCAT3-203ENST00000535479 ANO8Q9HCE9 1232 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms