RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 MAGI2Q86UL8 1455 aa26.21■■□□□ 1.79
CLSTN3-204ENST00000535313 ADAMTSL3P82987 1691 aa26.21■■□□□ 1.79
CLSTN3-204ENST00000535313 HECW2Q9P2P5 1572 aa26.2■■□□□ 1.79
CLSTN3-204ENST00000535313 ZFYVE16Q7Z3T8 1539 aa26.2■■□□□ 1.79
CLSTN3-204ENST00000535313 FYCO1Q9BQS8 1478 aa26.19■■□□□ 1.78
CLSTN3-204ENST00000535313 BCORL1Q5H9F3 1711 aa26.19■■□□□ 1.78
CLSTN3-204ENST00000535313 ARHGAP5Q13017 1502 aa26.19■■□□□ 1.78
CLSTN3-204ENST00000535313 PTPRMP28827 1452 aa26.17■■□□□ 1.78
CLSTN3-204ENST00000535313 YEATS2Q9ULM3 1422 aa26.16■■□□□ 1.78
CLSTN3-204ENST00000535313 MADDQ8WXG6 1647 aa26.11■■□□□ 1.77
CLSTN3-204ENST00000535313 ZNF518AQ6AHZ1 1483 aa26.1■■□□□ 1.77
CLSTN3-204ENST00000535313 ATP10AO60312 1499 aa26.07■■□□□ 1.76
CLSTN3-204ENST00000535313 AFAP1Q8N556 730 aa26.07■■□□□ 1.76
CLSTN3-204ENST00000535313 CDC42BPBQ9Y5S2 1711 aa26.06■■□□□ 1.76
CLSTN3-204ENST00000535313 MYT1LQ9UL68 1186 aa26.06■■□□□ 1.76
CLSTN3-204ENST00000535313 PREX2Q70Z35 1606 aa26.05■■□□□ 1.76
CLSTN3-204ENST00000535313 MLECQ14165 292 aa26.04■■□□□ 1.76
CLSTN3-204ENST00000535313 C9orf84Q5VXU9 1444 aa26.04■■□□□ 1.76
CLSTN3-204ENST00000535313 RIMS1Q86UR5 1692 aaKnown RBP26.03■■□□□ 1.76
CLSTN3-204ENST00000535313 KDM5CP41229 1560 aa26.02■■□□□ 1.76
CLSTN3-204ENST00000535313 SIGLEC1Q9BZZ2 1709 aa26.02■■□□□ 1.76
CLSTN3-204ENST00000535313 CEP162Q5TB80 1403 aa25.99■■□□□ 1.75
CLSTN3-204ENST00000535313 ABCC1P33527 1531 aa25.98■■□□□ 1.75
CLSTN3-204ENST00000535313 CDC42BPAQ5VT25 1732 aa25.97■■□□□ 1.75
CLSTN3-204ENST00000535313 PLPPR3Q6T4P5 718 aa25.97■■□□□ 1.75
CLSTN3-204ENST00000535313 MTUS2Q5JR59 1369 aa25.96■■□□□ 1.75
CLSTN3-204ENST00000535313 ZNF777Q9ULD5 760 aaPredicted RBP25.96■■□□□ 1.75
CLSTN3-204ENST00000535313 TRAPPC8Q9Y2L5 1435 aa25.96■■□□□ 1.75
CLSTN3-204ENST00000535313 ARHGEF12Q9NZN5 1544 aa25.95■■□□□ 1.74
CLSTN3-204ENST00000535313 MLH3Q9UHC1 1453 aa25.95■■□□□ 1.74
CLSTN3-204ENST00000535313 GPATCH8Q9UKJ3 1502 aaKnown RBP25.93■■□□□ 1.74
CLSTN3-204ENST00000535313 ITSN2Q9NZM3 1697 aa25.93■■□□□ 1.74
CLSTN3-204ENST00000535313 CCNB3Q8WWL7 1395 aa25.92■■□□□ 1.74
CLSTN3-204ENST00000535313 FER1L4A9Z1Z3 1794 aa25.92■■□□□ 1.74
CLSTN3-204ENST00000535313 DIP2CQ9Y2E4 1556 aa25.9■■□□□ 1.74
CLSTN3-204ENST00000535313 CFDP1Q9UEE9 299 aaPredicted RBP25.9■■□□□ 1.74
CLSTN3-204ENST00000535313 LMTK3Q96Q04 1460 aa25.88■■□□□ 1.73
CLSTN3-204ENST00000535313 REREQ9P2R6 1566 aa25.87■■□□□ 1.73
CLSTN3-204ENST00000535313 ABCA6Q8N139 1617 aa25.87■■□□□ 1.73
CLSTN3-204ENST00000535313 SAMD9LQ8IVG5 1584 aa25.86■■□□□ 1.73
CLSTN3-204ENST00000535313 PLEKHH2Q8IVE3 1493 aa25.85■■□□□ 1.73
CLSTN3-204ENST00000535313 SYCP2Q9BX26 1530 aa25.84■■□□□ 1.73
CLSTN3-204ENST00000535313 HNRNPMP52272 730 aaKnown RBP eCLIP25.84■■□□□ 1.73
CLSTN3-204ENST00000535313 EHBP1L1Q8N3D4 1523 aa25.83■■□□□ 1.73
CLSTN3-204ENST00000535313 KIAA1107Q9UPP5 1409 aa25.83■■□□□ 1.73
CLSTN3-204ENST00000535313 LOC105371045A0A1W2PR82 267 aa25.83■■□□□ 1.73
CLSTN3-204ENST00000535313 SPAG9O60271 1321 aaKnown RBP25.82■■□□□ 1.72
CLSTN3-204ENST00000535313 ILDR1Q86SU0 546 aaPredicted RBP25.81■■□□□ 1.72
CLSTN3-204ENST00000535313 KIDINS220Q9ULH0 1771 aa25.81■■□□□ 1.72
CLSTN3-204ENST00000535313 AGLP35573 1532 aa25.8■■□□□ 1.72
CLSTN3-204ENST00000535313 ESF1Q9H501 851 aaKnown RBP25.79■■□□□ 1.72
CLSTN3-204ENST00000535313 CEBPAP49715 358 aaPredicted RBP25.78■■□□□ 1.72
CLSTN3-204ENST00000535313 HSPA2P54652 639 aa25.77■■□□□ 1.72
CLSTN3-204ENST00000535313 TIAM1Q13009 1591 aa25.76■■□□□ 1.71
CLSTN3-204ENST00000535313 ZNF644Q9H582 1327 aaPredicted RBP25.72■■□□□ 1.71
CLSTN3-204ENST00000535313 ATP7AQ04656 1500 aa25.72■■□□□ 1.71
CLSTN3-204ENST00000535313 VPS8Q8N3P4 1428 aa25.71■■□□□ 1.71
CLSTN3-204ENST00000535313 NCOA2Q15596 1464 aa25.68■■□□□ 1.7
CLSTN3-204ENST00000535313 INO80Q9ULG1 1556 aaPredicted RBP25.68■■□□□ 1.7
CLSTN3-204ENST00000535313 SUPT6HQ7KZ85 1726 aaKnown RBP25.68■■□□□ 1.7
CLSTN3-204ENST00000535313 CNTLNQ9NXG0 1405 aa25.67■■□□□ 1.7
CLSTN3-204ENST00000535313 PREX1Q8TCU6 1659 aa25.67■■□□□ 1.7
CLSTN3-204ENST00000535313 A2MP01023 1474 aa25.66■■□□□ 1.7
CLSTN3-204ENST00000535313 MBD5Q9P267 1494 aa25.65■■□□□ 1.7
CLSTN3-204ENST00000535313 UHRF1BP1Q6BDS2 1440 aa25.64■■□□□ 1.7
CLSTN3-204ENST00000535313 SETD1BQ9UPS6 1966 aaKnown RBP25.64■■□□□ 1.69
CLSTN3-204ENST00000535313 C3P01024 1663 aa25.62■■□□□ 1.69
CLSTN3-204ENST00000535313 PLXNC1O60486 1568 aa25.61■■□□□ 1.69
CLSTN3-204ENST00000535313 LRRC9Q6ZRR7 1453 aa25.6■■□□□ 1.69
CLSTN3-204ENST00000535313 RSPH4AQ5TD94 716 aa25.59■■□□□ 1.69
CLSTN3-204ENST00000535313 RTEL1-TNFRSF6BF6WH68 1400 aa25.59■■□□□ 1.69
CLSTN3-204ENST00000535313 CAMSAP2Q08AD1 1489 aa25.58■■□□□ 1.69
CLSTN3-204ENST00000535313 GGT6Q6P531 493 aa25.57■■□□□ 1.68
CLSTN3-204ENST00000535313 CCDC141Q6ZP82 1450 aa25.57■■□□□ 1.68
CLSTN3-204ENST00000535313 ADGBQ8N7X0 1667 aa25.57■■□□□ 1.68
CLSTN3-204ENST00000535313 ZMYM3Q14202 1370 aa25.56■■□□□ 1.68
CLSTN3-204ENST00000535313 MAP3K1Q13233 1512 aa25.55■■□□□ 1.68
CLSTN3-204ENST00000535313 FBXO41Q8TF61 875 aa25.55■■□□□ 1.68
CLSTN3-204ENST00000535313 MROH2AA6NES4 1674 aa25.54■■□□□ 1.68
CLSTN3-204ENST00000535313 PPP6R1Q9UPN7 881 aa25.53■■□□□ 1.68
CLSTN3-204ENST00000535313 KANK4Q5T7N3 995 aaPredicted RBP25.52■■□□□ 1.68
CLSTN3-204ENST00000535313 DMRT2Q9Y5R5 561 aa25.52■■□□□ 1.68
CLSTN3-204ENST00000535313 DHX29Q7Z478 1369 aaKnown RBP25.52■■□□□ 1.68
CLSTN3-204ENST00000535313 NPATQ14207 1427 aa25.51■■□□□ 1.67
CLSTN3-204ENST00000535313 TSPY4P0CV99 314 aa25.5■■□□□ 1.67
CLSTN3-204ENST00000535313 TSPY10P0CW01 314 aa25.5■■□□□ 1.67
CLSTN3-204ENST00000535313 APLP2Q06481 763 aa25.49■■□□□ 1.67
CLSTN3-204ENST00000535313 CLTCQ00610 1675 aaKnown RBP25.48■■□□□ 1.67
CLSTN3-204ENST00000535313 ARHGEF5Q12774 1597 aa25.48■■□□□ 1.67
CLSTN3-204ENST00000535313 KIF3BO15066 747 aa25.45■■□□□ 1.66
CLSTN3-204ENST00000535313 STRCQ7RTU9 1775 aa25.44■■□□□ 1.66
CLSTN3-204ENST00000535313 MYOM3Q5VTT5 1437 aa25.43■■□□□ 1.66
CLSTN3-204ENST00000535313 MIA2Q96PC5 1412 aa25.42■■□□□ 1.66
CLSTN3-204ENST00000535313 PTPRKQ15262 1439 aa25.41■■□□□ 1.66
CLSTN3-204ENST00000535313 CERKQ8TCT0 537 aa25.4■■□□□ 1.66
CLSTN3-204ENST00000535313 PTPRTO14522 1441 aa25.37■■□□□ 1.65
CLSTN3-204ENST00000535313 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
CLSTN3-204ENST00000535313 WASHC2CQ9Y4E1 1318 aa25.35■■□□□ 1.65
CLSTN3-204ENST00000535313 MAST1Q9Y2H9 1570 aa25.34■■□□□ 1.65
CLSTN3-204ENST00000535313 CAMSAP1Q5T5Y3 1602 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms