RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 POGZQ7Z3K3 1410 aa30.64■■■□□ 2.5
NDUFS3-213ENST00000534716 MYO5CQ9NQX4 1742 aa30.64■■■□□ 2.5
NDUFS3-213ENST00000534716 FYCO1Q9BQS8 1478 aa30.62■■■□□ 2.49
NDUFS3-213ENST00000534716 HECW2Q9P2P5 1572 aa30.62■■■□□ 2.49
NDUFS3-213ENST00000534716 BCORL1Q5H9F3 1711 aa30.61■■■□□ 2.49
NDUFS3-213ENST00000534716 ZFYVE16Q7Z3T8 1539 aa30.59■■■□□ 2.49
NDUFS3-213ENST00000534716 ARID4BQ4LE39 1312 aaPredicted RBP30.59■■■□□ 2.49
NDUFS3-213ENST00000534716 PTPRMP28827 1452 aa30.58■■■□□ 2.49
NDUFS3-213ENST00000534716 YEATS2Q9ULM3 1422 aa30.57■■■□□ 2.48
NDUFS3-213ENST00000534716 ARHGAP5Q13017 1502 aa30.53■■■□□ 2.48
NDUFS3-213ENST00000534716 ZNF518AQ6AHZ1 1483 aa30.5■■■□□ 2.47
NDUFS3-213ENST00000534716 MADDQ8WXG6 1647 aa30.5■■■□□ 2.47
NDUFS3-213ENST00000534716 ATP10AO60312 1499 aa30.46■■■□□ 2.47
NDUFS3-213ENST00000534716 KDM5CP41229 1560 aa30.45■■■□□ 2.47
NDUFS3-213ENST00000534716 CDC42BPBQ9Y5S2 1711 aa30.45■■■□□ 2.47
NDUFS3-213ENST00000534716 PREX2Q70Z35 1606 aa30.45■■■□□ 2.47
NDUFS3-213ENST00000534716 SIGLEC1Q9BZZ2 1709 aa30.44■■■□□ 2.46
NDUFS3-213ENST00000534716 AFAP1Q8N556 730 aa30.43■■■□□ 2.46
NDUFS3-213ENST00000534716 C9orf84Q5VXU9 1444 aa30.41■■■□□ 2.46
NDUFS3-213ENST00000534716 ABCC1P33527 1531 aa30.38■■■□□ 2.45
NDUFS3-213ENST00000534716 MLH3Q9UHC1 1453 aa30.37■■■□□ 2.45
NDUFS3-213ENST00000534716 ARHGEF12Q9NZN5 1544 aa30.36■■■□□ 2.45
NDUFS3-213ENST00000534716 RIMS1Q86UR5 1692 aaKnown RBP30.36■■■□□ 2.45
NDUFS3-213ENST00000534716 CDC42BPAQ5VT25 1732 aa30.34■■■□□ 2.45
NDUFS3-213ENST00000534716 CEP162Q5TB80 1403 aa30.34■■■□□ 2.45
NDUFS3-213ENST00000534716 GPATCH8Q9UKJ3 1502 aaKnown RBP30.33■■■□□ 2.45
NDUFS3-213ENST00000534716 TRAPPC8Q9Y2L5 1435 aa30.33■■■□□ 2.45
NDUFS3-213ENST00000534716 REREQ9P2R6 1566 aa30.31■■■□□ 2.44
NDUFS3-213ENST00000534716 DIP2CQ9Y2E4 1556 aa30.29■■■□□ 2.44
NDUFS3-213ENST00000534716 MLECQ14165 292 aa30.29■■■□□ 2.44
NDUFS3-213ENST00000534716 ITSN2Q9NZM3 1697 aa30.29■■■□□ 2.44
NDUFS3-213ENST00000534716 LMTK3Q96Q04 1460 aa30.27■■■□□ 2.44
NDUFS3-213ENST00000534716 MTUS2Q5JR59 1369 aa30.27■■■□□ 2.44
NDUFS3-213ENST00000534716 FBXO41Q8TF61 875 aa30.24■■■□□ 2.43
NDUFS3-213ENST00000534716 SAMD9LQ8IVG5 1584 aa30.24■■■□□ 2.43
NDUFS3-213ENST00000534716 MYT1LQ9UL68 1186 aa30.23■■■□□ 2.43
NDUFS3-213ENST00000534716 FER1L4A9Z1Z3 1794 aa30.23■■■□□ 2.43
NDUFS3-213ENST00000534716 KIAA1107Q9UPP5 1409 aa30.22■■■□□ 2.43
NDUFS3-213ENST00000534716 ABCA6Q8N139 1617 aa30.22■■■□□ 2.43
NDUFS3-213ENST00000534716 CCNB3Q8WWL7 1395 aa30.22■■■□□ 2.43
NDUFS3-213ENST00000534716 AGLP35573 1532 aa30.21■■■□□ 2.43
NDUFS3-213ENST00000534716 CFDP1Q9UEE9 299 aaPredicted RBP30.2■■■□□ 2.43
NDUFS3-213ENST00000534716 ZNF777Q9ULD5 760 aaPredicted RBP30.2■■■□□ 2.43
NDUFS3-213ENST00000534716 PLEKHH2Q8IVE3 1493 aa30.19■■■□□ 2.42
NDUFS3-213ENST00000534716 EHBP1L1Q8N3D4 1523 aa30.18■■■□□ 2.42
NDUFS3-213ENST00000534716 SYCP2Q9BX26 1530 aa30.17■■■□□ 2.42
NDUFS3-213ENST00000534716 KIDINS220Q9ULH0 1771 aa30.17■■■□□ 2.42
NDUFS3-213ENST00000534716 HNRNPMP52272 730 aaKnown RBP eCLIP30.14■■■□□ 2.42
NDUFS3-213ENST00000534716 TIAM1Q13009 1591 aa30.11■■■□□ 2.41
NDUFS3-213ENST00000534716 SPAG9O60271 1321 aaKnown RBP30.11■■■□□ 2.41
NDUFS3-213ENST00000534716 PLPPR3Q6T4P5 718 aa30.1■■■□□ 2.41
NDUFS3-213ENST00000534716 LOC105371045A0A1W2PR82 267 aa30.09■■■□□ 2.41
NDUFS3-213ENST00000534716 CEBPAP49715 358 aaPredicted RBP30.05■■■□□ 2.4
NDUFS3-213ENST00000534716 ATP7AQ04656 1500 aa30.04■■■□□ 2.4
NDUFS3-213ENST00000534716 VPS8Q8N3P4 1428 aa30.04■■■□□ 2.4
NDUFS3-213ENST00000534716 INO80Q9ULG1 1556 aaPredicted RBP30.03■■■□□ 2.4
NDUFS3-213ENST00000534716 HSPA2P54652 639 aa30.03■■■□□ 2.4
NDUFS3-213ENST00000534716 MBD5Q9P267 1494 aa30.03■■■□□ 2.4
NDUFS3-213ENST00000534716 ZNF644Q9H582 1327 aaPredicted RBP30.01■■■□□ 2.4
NDUFS3-213ENST00000534716 CNTLNQ9NXG0 1405 aa30■■■□□ 2.39
NDUFS3-213ENST00000534716 NCOA2Q15596 1464 aa29.99■■■□□ 2.39
NDUFS3-213ENST00000534716 PREX1Q8TCU6 1659 aa29.99■■■□□ 2.39
NDUFS3-213ENST00000534716 PLXNC1O60486 1568 aa29.98■■■□□ 2.39
NDUFS3-213ENST00000534716 ESF1Q9H501 851 aaKnown RBP29.98■■■□□ 2.39
NDUFS3-213ENST00000534716 SUPT6HQ7KZ85 1726 aaKnown RBP29.97■■■□□ 2.39
NDUFS3-213ENST00000534716 A2MP01023 1474 aa29.96■■■□□ 2.39
NDUFS3-213ENST00000534716 RTEL1-TNFRSF6BF6WH68 1400 aa29.96■■■□□ 2.39
NDUFS3-213ENST00000534716 C3P01024 1663 aa29.94■■■□□ 2.38
NDUFS3-213ENST00000534716 LRRC9Q6ZRR7 1453 aa29.93■■■□□ 2.38
NDUFS3-213ENST00000534716 MAP3K1Q13233 1512 aa29.92■■■□□ 2.38
NDUFS3-213ENST00000534716 UHRF1BP1Q6BDS2 1440 aa29.92■■■□□ 2.38
NDUFS3-213ENST00000534716 RSPH4AQ5TD94 716 aa29.9■■■□□ 2.38
NDUFS3-213ENST00000534716 SETD1BQ9UPS6 1966 aaKnown RBP29.88■■■□□ 2.37
NDUFS3-213ENST00000534716 CAMSAP2Q08AD1 1489 aa29.87■■■□□ 2.37
NDUFS3-213ENST00000534716 MROH2AA6NES4 1674 aa29.87■■■□□ 2.37
NDUFS3-213ENST00000534716 ADGBQ8N7X0 1667 aa29.87■■■□□ 2.37
NDUFS3-213ENST00000534716 CCDC141Q6ZP82 1450 aa29.86■■■□□ 2.37
NDUFS3-213ENST00000534716 PPP6R1Q9UPN7 881 aa29.85■■■□□ 2.37
NDUFS3-213ENST00000534716 ZMYM3Q14202 1370 aa29.85■■■□□ 2.37
NDUFS3-213ENST00000534716 NPATQ14207 1427 aa29.84■■■□□ 2.37
NDUFS3-213ENST00000534716 DHX29Q7Z478 1369 aaKnown RBP29.82■■■□□ 2.36
NDUFS3-213ENST00000534716 ARHGEF5Q12774 1597 aa29.8■■■□□ 2.36
NDUFS3-213ENST00000534716 KANK4Q5T7N3 995 aaPredicted RBP29.79■■■□□ 2.36
NDUFS3-213ENST00000534716 GGT6Q6P531 493 aa29.78■■■□□ 2.36
NDUFS3-213ENST00000534716 DMRT2Q9Y5R5 561 aa29.78■■■□□ 2.36
NDUFS3-213ENST00000534716 CLTCQ00610 1675 aaKnown RBP29.74■■■□□ 2.35
NDUFS3-213ENST00000534716 STRCQ7RTU9 1775 aa29.74■■■□□ 2.35
NDUFS3-213ENST00000534716 MIA2Q96PC5 1412 aa29.73■■■□□ 2.35
NDUFS3-213ENST00000534716 TSPY4P0CV99 314 aa29.72■■■□□ 2.35
NDUFS3-213ENST00000534716 TSPY10P0CW01 314 aa29.72■■■□□ 2.35
NDUFS3-213ENST00000534716 PTPRKQ15262 1439 aa29.71■■■□□ 2.35
NDUFS3-213ENST00000534716 MYOM3Q5VTT5 1437 aa29.71■■■□□ 2.35
NDUFS3-213ENST00000534716 PTPRTO14522 1441 aa29.68■■■□□ 2.34
NDUFS3-213ENST00000534716 FAM135AQ9P2D6 1515 aa29.67■■■□□ 2.34
NDUFS3-213ENST00000534716 KIF3BO15066 747 aa29.66■■■□□ 2.34
NDUFS3-213ENST00000534716 MAST1Q9Y2H9 1570 aa29.65■■■□□ 2.34
NDUFS3-213ENST00000534716 NCOA1Q15788 1441 aa29.65■■■□□ 2.34
NDUFS3-213ENST00000534716 CERKQ8TCT0 537 aa29.65■■■□□ 2.34
NDUFS3-213ENST00000534716 APLP2Q06481 763 aa29.61■■■□□ 2.33
NDUFS3-213ENST00000534716 KDM5DQ9BY66 1539 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 226 ms