RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 FRMPD1Q5SYB0 1578 aa12.25□□□□□ -0.45
GEN1-207ENST00000534669 ADAMTSL3P82987 1691 aa12.24□□□□□ -0.45
GEN1-207ENST00000534669 RAPGEF6Q8TEU7 1601 aa12.23□□□□□ -0.45
GEN1-207ENST00000534669 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
GEN1-207ENST00000534669 RAPGEF3O95398 923 aa12.2□□□□□ -0.46
GEN1-207ENST00000534669 EHMT2Q96KQ7 1210 aa12.19□□□□□ -0.46
GEN1-207ENST00000534669 BCORL1Q5H9F3 1711 aa12.19□□□□□ -0.46
GEN1-207ENST00000534669 PTPRMP28827 1452 aa12.19□□□□□ -0.46
GEN1-207ENST00000534669 NUP153P49790 1475 aaKnown RBP12.19□□□□□ -0.46
GEN1-207ENST00000534669 MADDQ8WXG6 1647 aa12.19□□□□□ -0.46
GEN1-207ENST00000534669 SIGLEC1Q9BZZ2 1709 aa12.17□□□□□ -0.46
GEN1-207ENST00000534669 RICTORQ6R327 1708 aa12.17□□□□□ -0.46
GEN1-207ENST00000534669 NEO1Q92859 1461 aa12.16□□□□□ -0.46
GEN1-207ENST00000534669 FHOD3Q2V2M9 1422 aa12.16□□□□□ -0.46
GEN1-207ENST00000534669 RIMS1Q86UR5 1692 aaKnown RBP12.14□□□□□ -0.47
GEN1-207ENST00000534669 RANGAP1P46060 587 aaPredicted RBP12.14□□□□□ -0.47
GEN1-207ENST00000534669 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
GEN1-207ENST00000534669 ARHGEF40Q8TER5 1519 aa12.14□□□□□ -0.47
GEN1-207ENST00000534669 PHLDB1Q86UU1 1377 aa12.13□□□□□ -0.47
GEN1-207ENST00000534669 TTC37Q6PGP7 1564 aa12.13□□□□□ -0.47
GEN1-207ENST00000534669 LMTK3Q96Q04 1460 aa12.12□□□□□ -0.47
GEN1-207ENST00000534669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.11□□□□□ -0.47
GEN1-207ENST00000534669 PCF11O94913 1555 aaKnown RBP12.11□□□□□ -0.47
GEN1-207ENST00000534669 CDK13Q14004 1512 aaKnown RBP12.08□□□□□ -0.48
GEN1-207ENST00000534669 AKNAQ7Z591 1439 aa12.08□□□□□ -0.48
GEN1-207ENST00000534669 ARID4BQ4LE39 1312 aaPredicted RBP12.08□□□□□ -0.48
GEN1-207ENST00000534669 FANCAO15360 1455 aa12.08□□□□□ -0.48
GEN1-207ENST00000534669 DENND4BO75064 1496 aaPredicted RBP12.08□□□□□ -0.48
GEN1-207ENST00000534669 FBXO41Q8TF61 875 aa12.07□□□□□ -0.48
GEN1-207ENST00000534669 YEATS2Q9ULM3 1422 aa12.07□□□□□ -0.48
GEN1-207ENST00000534669 ZMYM4Q5VZL5 1548 aa12.06□□□□□ -0.48
GEN1-207ENST00000534669 CFAP74Q9C0B2 1584 aa12.06□□□□□ -0.48
GEN1-207ENST00000534669 HECW1Q76N89 1606 aa12.05□□□□□ -0.48
GEN1-207ENST00000534669 FAM9AQ8IZU1 332 aaPredicted RBP12.05□□□□□ -0.48
GEN1-207ENST00000534669 ZFYVE16Q7Z3T8 1539 aa12.05□□□□□ -0.48
GEN1-207ENST00000534669 HSPA2P54652 639 aa12.04□□□□□ -0.48
GEN1-207ENST00000534669 EFCAB5A4FU69 1503 aa12.04□□□□□ -0.48
GEN1-207ENST00000534669 FER1L4A9Z1Z3 1794 aa12.03□□□□□ -0.48
GEN1-207ENST00000534669 PLEKHD1A6NEE1 506 aa12.03□□□□□ -0.48
GEN1-207ENST00000534669 EEA1Q15075 1411 aa12.03□□□□□ -0.48
GEN1-207ENST00000534669 LRRIQ1Q96JM4 1722 aa12.01□□□□□ -0.49
GEN1-207ENST00000534669 KIF14Q15058 1648 aa12□□□□□ -0.49
GEN1-207ENST00000534669 POGZQ7Z3K3 1410 aa12□□□□□ -0.49
GEN1-207ENST00000534669 MYO5CQ9NQX4 1742 aa12□□□□□ -0.49
GEN1-207ENST00000534669 SCAPERQ9BY12 1400 aa11.99□□□□□ -0.49
GEN1-207ENST00000534669 PLCH2O75038 1416 aa11.98□□□□□ -0.49
GEN1-207ENST00000534669 MLECQ14165 292 aa11.98□□□□□ -0.49
GEN1-207ENST00000534669 ARHGEF12Q9NZN5 1544 aa11.97□□□□□ -0.49
GEN1-207ENST00000534669 MAGI2Q86UL8 1455 aa11.97□□□□□ -0.49
GEN1-207ENST00000534669 ARHGAP35Q9NRY4 1499 aa11.96□□□□□ -0.49
GEN1-207ENST00000534669 PREX1Q8TCU6 1659 aa11.94□□□□□ -0.5
GEN1-207ENST00000534669 STRCQ7RTU9 1775 aa11.94□□□□□ -0.5
GEN1-207ENST00000534669 ATP10AO60312 1499 aa11.94□□□□□ -0.5
GEN1-207ENST00000534669 CEBPAP49715 358 aaPredicted RBP11.93□□□□□ -0.5
GEN1-207ENST00000534669 C9orf84Q5VXU9 1444 aa11.93□□□□□ -0.5
GEN1-207ENST00000534669 KDM5CP41229 1560 aa11.92□□□□□ -0.5
GEN1-207ENST00000534669 CDC42BPBQ9Y5S2 1711 aa11.92□□□□□ -0.5
GEN1-207ENST00000534669 ABCA6Q8N139 1617 aa11.92□□□□□ -0.5
GEN1-207ENST00000534669 DIP2CQ9Y2E4 1556 aa11.92□□□□□ -0.5
GEN1-207ENST00000534669 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
GEN1-207ENST00000534669 CERKQ8TCT0 537 aa11.9□□□□□ -0.5
GEN1-207ENST00000534669 AKT1S1Q96B36 256 aa11.9□□□□□ -0.5
GEN1-207ENST00000534669 ARHGAP5Q13017 1502 aa11.9□□□□□ -0.5
GEN1-207ENST00000534669 TROQ12816 1431 aaPredicted RBP11.89□□□□□ -0.51
GEN1-207ENST00000534669 FMN1Q68DA7 1419 aa11.89□□□□□ -0.51
GEN1-207ENST00000534669 AFAP1Q8N556 730 aa11.89□□□□□ -0.51
GEN1-207ENST00000534669 C3P01024 1663 aa11.88□□□□□ -0.51
GEN1-207ENST00000534669 EFCAB2Q5VUJ9 269 aa11.88□□□□□ -0.51
GEN1-207ENST00000534669 ZNF518AQ6AHZ1 1483 aa11.88□□□□□ -0.51
GEN1-207ENST00000534669 ITSN2Q9NZM3 1697 aa11.87□□□□□ -0.51
GEN1-207ENST00000534669 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
GEN1-207ENST00000534669 UBTFP17480 764 aaKnown RBP11.87□□□□□ -0.51
GEN1-207ENST00000534669 MKRN4PQ13434 485 aaPredicted RBP11.86□□□□□ -0.51
GEN1-207ENST00000534669 REREQ9P2R6 1566 aa11.86□□□□□ -0.51
GEN1-207ENST00000534669 CDC42BPAQ5VT25 1732 aa11.86□□□□□ -0.51
GEN1-207ENST00000534669 ABCC1P33527 1531 aa11.86□□□□□ -0.51
GEN1-207ENST00000534669 TRAPPC8Q9Y2L5 1435 aa11.86□□□□□ -0.51
GEN1-207ENST00000534669 KIDINS220Q9ULH0 1771 aa11.85□□□□□ -0.51
GEN1-207ENST00000534669 SETD1BQ9UPS6 1966 aaKnown RBP11.84□□□□□ -0.51
GEN1-207ENST00000534669 MLH3Q9UHC1 1453 aa11.83□□□□□ -0.52
GEN1-207ENST00000534669 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
GEN1-207ENST00000534669 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
GEN1-207ENST00000534669 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
GEN1-207ENST00000534669 CLIP1P30622 1438 aa11.82□□□□□ -0.52
GEN1-207ENST00000534669 UHRF1BP1Q6BDS2 1440 aa11.82□□□□□ -0.52
GEN1-207ENST00000534669 AGLP35573 1532 aa11.81□□□□□ -0.52
GEN1-207ENST00000534669 CDK11AQ9UQ88 783 aaPredicted RBP11.81□□□□□ -0.52
GEN1-207ENST00000534669 SAMD9LQ8IVG5 1584 aa11.8□□□□□ -0.52
GEN1-207ENST00000534669 CASKIN1Q8WXD9 1431 aa11.79□□□□□ -0.52
GEN1-207ENST00000534669 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
GEN1-207ENST00000534669 LTBP4Q8N2S1 1624 aa11.78□□□□□ -0.52
GEN1-207ENST00000534669 ILDR2Q71H61 639 aa11.78□□□□□ -0.52
GEN1-207ENST00000534669 SUPT6HQ7KZ85 1726 aaKnown RBP11.77□□□□□ -0.52
GEN1-207ENST00000534669 SYCP2Q9BX26 1530 aa11.77□□□□□ -0.52
GEN1-207ENST00000534669 PTPRTO14522 1441 aa11.77□□□□□ -0.53
GEN1-207ENST00000534669 CCDC18Q5T9S5 1454 aa11.76□□□□□ -0.53
GEN1-207ENST00000534669 POTEHQ6S545 545 aa11.76□□□□□ -0.53
GEN1-207ENST00000534669 NCOA1Q15788 1441 aa11.76□□□□□ -0.53
GEN1-207ENST00000534669 MROH2AA6NES4 1674 aa11.75□□□□□ -0.53
GEN1-207ENST00000534669 CLTCQ00610 1675 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms