RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 RICTORQ6R327 1708 aa14.38□□□□□ -0.11
COPB1-211ENST00000534234 HECW2Q9P2P5 1572 aa14.37□□□□□ -0.11
COPB1-211ENST00000534234 MLECQ14165 292 aa14.37□□□□□ -0.11
COPB1-211ENST00000534234 ZMYM4Q5VZL5 1548 aa14.37□□□□□ -0.11
COPB1-211ENST00000534234 ARHGEF40Q8TER5 1519 aa14.37□□□□□ -0.11
COPB1-211ENST00000534234 ADAMTSL3P82987 1691 aa14.36□□□□□ -0.11
COPB1-211ENST00000534234 ARHGAP5Q13017 1502 aa14.36□□□□□ -0.11
COPB1-211ENST00000534234 ZFYVE16Q7Z3T8 1539 aa14.36□□□□□ -0.11
COPB1-211ENST00000534234 MYT1LQ9UL68 1186 aa14.36□□□□□ -0.11
COPB1-211ENST00000534234 PCF11O94913 1555 aaKnown RBP14.36□□□□□ -0.11
COPB1-211ENST00000534234 FYCO1Q9BQS8 1478 aa14.35□□□□□ -0.11
COPB1-211ENST00000534234 PLPPR3Q6T4P5 718 aa14.34□□□□□ -0.11
COPB1-211ENST00000534234 ATP10AO60312 1499 aa14.33□□□□□ -0.12
COPB1-211ENST00000534234 BCORL1Q5H9F3 1711 aa14.33□□□□□ -0.12
COPB1-211ENST00000534234 MYO5CQ9NQX4 1742 aa14.32□□□□□ -0.12
COPB1-211ENST00000534234 ZNF518AQ6AHZ1 1483 aa14.32□□□□□ -0.12
COPB1-211ENST00000534234 ZNF777Q9ULD5 760 aaPredicted RBP14.32□□□□□ -0.12
COPB1-211ENST00000534234 LRRIQ1Q96JM4 1722 aa14.32□□□□□ -0.12
COPB1-211ENST00000534234 MADDQ8WXG6 1647 aa14.31□□□□□ -0.12
COPB1-211ENST00000534234 C9orf84Q5VXU9 1444 aa14.3□□□□□ -0.12
COPB1-211ENST00000534234 TRAPPC8Q9Y2L5 1435 aa14.28□□□□□ -0.12
COPB1-211ENST00000534234 ARHGEF12Q9NZN5 1544 aa14.27□□□□□ -0.12
COPB1-211ENST00000534234 ILDR1Q86SU0 546 aaPredicted RBP14.27□□□□□ -0.12
COPB1-211ENST00000534234 CFDP1Q9UEE9 299 aaPredicted RBP14.27□□□□□ -0.12
COPB1-211ENST00000534234 MTUS2Q5JR59 1369 aa14.27□□□□□ -0.13
COPB1-211ENST00000534234 CEP162Q5TB80 1403 aa14.27□□□□□ -0.13
COPB1-211ENST00000534234 LOC105371045A0A1W2PR82 267 aa14.26□□□□□ -0.13
COPB1-211ENST00000534234 HNRNPMP52272 730 aaKnown RBP eCLIP14.26□□□□□ -0.13
COPB1-211ENST00000534234 MLH3Q9UHC1 1453 aa14.25□□□□□ -0.13
COPB1-211ENST00000534234 GPATCH8Q9UKJ3 1502 aaKnown RBP14.25□□□□□ -0.13
COPB1-211ENST00000534234 KDM5CP41229 1560 aa14.25□□□□□ -0.13
COPB1-211ENST00000534234 CCNB3Q8WWL7 1395 aa14.25□□□□□ -0.13
COPB1-211ENST00000534234 SIGLEC1Q9BZZ2 1709 aa14.25□□□□□ -0.13
COPB1-211ENST00000534234 CDC42BPBQ9Y5S2 1711 aa14.25□□□□□ -0.13
COPB1-211ENST00000534234 PREX2Q70Z35 1606 aa14.24□□□□□ -0.13
COPB1-211ENST00000534234 CEBPAP49715 358 aaPredicted RBP14.24□□□□□ -0.13
COPB1-211ENST00000534234 RIMS1Q86UR5 1692 aaKnown RBP14.23□□□□□ -0.13
COPB1-211ENST00000534234 HSPA2P54652 639 aa14.23□□□□□ -0.13
COPB1-211ENST00000534234 ABCC1P33527 1531 aa14.23□□□□□ -0.13
COPB1-211ENST00000534234 LMTK3Q96Q04 1460 aa14.22□□□□□ -0.13
COPB1-211ENST00000534234 SPAG9O60271 1321 aaKnown RBP14.22□□□□□ -0.13
COPB1-211ENST00000534234 ESF1Q9H501 851 aaKnown RBP14.21□□□□□ -0.14
COPB1-211ENST00000534234 KIAA1107Q9UPP5 1409 aa14.2□□□□□ -0.14
COPB1-211ENST00000534234 DIP2CQ9Y2E4 1556 aa14.19□□□□□ -0.14
COPB1-211ENST00000534234 ZNF644Q9H582 1327 aaPredicted RBP14.19□□□□□ -0.14
COPB1-211ENST00000534234 CDC42BPAQ5VT25 1732 aa14.18□□□□□ -0.14
COPB1-211ENST00000534234 SAMD9LQ8IVG5 1584 aa14.17□□□□□ -0.14
COPB1-211ENST00000534234 PLEKHH2Q8IVE3 1493 aa14.17□□□□□ -0.14
COPB1-211ENST00000534234 REREQ9P2R6 1566 aa14.17□□□□□ -0.14
COPB1-211ENST00000534234 SYCP2Q9BX26 1530 aa14.17□□□□□ -0.14
COPB1-211ENST00000534234 AGLP35573 1532 aa14.16□□□□□ -0.14
COPB1-211ENST00000534234 ABCA6Q8N139 1617 aa14.16□□□□□ -0.14
COPB1-211ENST00000534234 ITSN2Q9NZM3 1697 aa14.15□□□□□ -0.14
COPB1-211ENST00000534234 FER1L4A9Z1Z3 1794 aa14.14□□□□□ -0.15
COPB1-211ENST00000534234 EHBP1L1Q8N3D4 1523 aa14.14□□□□□ -0.15
COPB1-211ENST00000534234 KIDINS220Q9ULH0 1771 aa14.13□□□□□ -0.15
COPB1-211ENST00000534234 GGT6Q6P531 493 aa14.11□□□□□ -0.15
COPB1-211ENST00000534234 VPS8Q8N3P4 1428 aa14.11□□□□□ -0.15
COPB1-211ENST00000534234 MBD5Q9P267 1494 aa14.11□□□□□ -0.15
COPB1-211ENST00000534234 TIAM1Q13009 1591 aa14.1□□□□□ -0.15
COPB1-211ENST00000534234 RSPH4AQ5TD94 716 aa14.1□□□□□ -0.15
COPB1-211ENST00000534234 FBXO41Q8TF61 875 aa14.1□□□□□ -0.15
COPB1-211ENST00000534234 NCOA2Q15596 1464 aa14.1□□□□□ -0.15
COPB1-211ENST00000534234 ATP7AQ04656 1500 aa14.1□□□□□ -0.15
COPB1-211ENST00000534234 UHRF1BP1Q6BDS2 1440 aa14.1□□□□□ -0.15
COPB1-211ENST00000534234 CNTLNQ9NXG0 1405 aa14.1□□□□□ -0.15
COPB1-211ENST00000534234 A2MP01023 1474 aa14.09□□□□□ -0.15
COPB1-211ENST00000534234 ZMYM3Q14202 1370 aa14.08□□□□□ -0.16
COPB1-211ENST00000534234 KANK4Q5T7N3 995 aaPredicted RBP14.08□□□□□ -0.16
COPB1-211ENST00000534234 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
COPB1-211ENST00000534234 DMRT2Q9Y5R5 561 aa14.07□□□□□ -0.16
COPB1-211ENST00000534234 RTEL1-TNFRSF6BF6WH68 1400 aa14.07□□□□□ -0.16
COPB1-211ENST00000534234 TSPY4P0CV99 314 aa14.05□□□□□ -0.16
COPB1-211ENST00000534234 TSPY10P0CW01 314 aa14.05□□□□□ -0.16
COPB1-211ENST00000534234 DHX29Q7Z478 1369 aaKnown RBP14.05□□□□□ -0.16
COPB1-211ENST00000534234 LRRC9Q6ZRR7 1453 aa14.05□□□□□ -0.16
COPB1-211ENST00000534234 INO80Q9ULG1 1556 aaPredicted RBP14.04□□□□□ -0.16
COPB1-211ENST00000534234 KIF3BO15066 747 aa14.04□□□□□ -0.16
COPB1-211ENST00000534234 PREX1Q8TCU6 1659 aa14.03□□□□□ -0.16
COPB1-211ENST00000534234 APLP2Q06481 763 aa14.03□□□□□ -0.16
COPB1-211ENST00000534234 SUPT6HQ7KZ85 1726 aaKnown RBP14.03□□□□□ -0.16
COPB1-211ENST00000534234 CAMSAP2Q08AD1 1489 aa14.02□□□□□ -0.16
COPB1-211ENST00000534234 CCDC141Q6ZP82 1450 aa14.02□□□□□ -0.16
COPB1-211ENST00000534234 CERKQ8TCT0 537 aa14.02□□□□□ -0.16
COPB1-211ENST00000534234 PLXNC1O60486 1568 aa14.02□□□□□ -0.17
COPB1-211ENST00000534234 C3P01024 1663 aa14.01□□□□□ -0.17
COPB1-211ENST00000534234 NPATQ14207 1427 aa14.01□□□□□ -0.17
COPB1-211ENST00000534234 MAP3K1Q13233 1512 aa14□□□□□ -0.17
COPB1-211ENST00000534234 SETD1BQ9UPS6 1966 aaKnown RBP13.99□□□□□ -0.17
COPB1-211ENST00000534234 WASHC2CQ9Y4E1 1318 aa13.97□□□□□ -0.17
COPB1-211ENST00000534234 PTPRKQ15262 1439 aa13.97□□□□□ -0.17
COPB1-211ENST00000534234 MYOM3Q5VTT5 1437 aa13.96□□□□□ -0.17
COPB1-211ENST00000534234 MIA2Q96PC5 1412 aa13.96□□□□□ -0.17
COPB1-211ENST00000534234 ADGBQ8N7X0 1667 aa13.96□□□□□ -0.17
COPB1-211ENST00000534234 PTPRTO14522 1441 aa13.95□□□□□ -0.18
COPB1-211ENST00000534234 FBXO31Q5XUX0 539 aaPredicted RBP13.95□□□□□ -0.18
COPB1-211ENST00000534234 ARHGEF5Q12774 1597 aa13.95□□□□□ -0.18
COPB1-211ENST00000534234 MROH2AA6NES4 1674 aa13.94□□□□□ -0.18
COPB1-211ENST00000534234 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
COPB1-211ENST00000534234 NCOA1Q15788 1441 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms