RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 CDC42BPAQ5VT25 1732 aa17.62■□□□□ 0.41
SDHD-208ENST00000534010 POGZQ7Z3K3 1410 aa17.62■□□□□ 0.41
SDHD-208ENST00000534010 MAGI2Q86UL8 1455 aa17.62■□□□□ 0.41
SDHD-208ENST00000534010 SIGLEC1Q9BZZ2 1709 aa17.61■□□□□ 0.41
SDHD-208ENST00000534010 KDM5CP41229 1560 aa17.61■□□□□ 0.41
SDHD-208ENST00000534010 BCORL1Q5H9F3 1711 aa17.59■□□□□ 0.41
SDHD-208ENST00000534010 SCAPERQ9BY12 1400 aa17.57■□□□□ 0.4
SDHD-208ENST00000534010 ABCC1P33527 1531 aa17.56■□□□□ 0.4
SDHD-208ENST00000534010 YEATS2Q9ULM3 1422 aa17.55■□□□□ 0.4
SDHD-208ENST00000534010 EFCAB2Q5VUJ9 269 aa17.55■□□□□ 0.4
SDHD-208ENST00000534010 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
SDHD-208ENST00000534010 ZFYVE16Q7Z3T8 1539 aa17.55■□□□□ 0.4
SDHD-208ENST00000534010 ARHGEF12Q9NZN5 1544 aa17.55■□□□□ 0.4
SDHD-208ENST00000534010 ARHGAP5Q13017 1502 aa17.54■□□□□ 0.4
SDHD-208ENST00000534010 GPATCH8Q9UKJ3 1502 aaKnown RBP17.53■□□□□ 0.4
SDHD-208ENST00000534010 ITSN2Q9NZM3 1697 aa17.53■□□□□ 0.4
SDHD-208ENST00000534010 ZNF518AQ6AHZ1 1483 aa17.53■□□□□ 0.4
SDHD-208ENST00000534010 REREQ9P2R6 1566 aa17.51■□□□□ 0.39
SDHD-208ENST00000534010 MLH3Q9UHC1 1453 aa17.5■□□□□ 0.39
SDHD-208ENST00000534010 SAMD9LQ8IVG5 1584 aa17.49■□□□□ 0.39
SDHD-208ENST00000534010 EHBP1L1Q8N3D4 1523 aa17.49■□□□□ 0.39
SDHD-208ENST00000534010 HECW2Q9P2P5 1572 aa17.49■□□□□ 0.39
SDHD-208ENST00000534010 MADDQ8WXG6 1647 aa17.48■□□□□ 0.39
SDHD-208ENST00000534010 LOC105371045A0A1W2PR82 267 aa17.47■□□□□ 0.39
SDHD-208ENST00000534010 ATP10AO60312 1499 aa17.47■□□□□ 0.39
SDHD-208ENST00000534010 TIAM1Q13009 1591 aa17.47■□□□□ 0.39
SDHD-208ENST00000534010 DIP2CQ9Y2E4 1556 aa17.47■□□□□ 0.39
SDHD-208ENST00000534010 TRAPPC8Q9Y2L5 1435 aa17.47■□□□□ 0.39
SDHD-208ENST00000534010 KIDINS220Q9ULH0 1771 aa17.46■□□□□ 0.39
SDHD-208ENST00000534010 PTPRMP28827 1452 aa17.46■□□□□ 0.39
SDHD-208ENST00000534010 VPS8Q8N3P4 1428 aa17.46■□□□□ 0.39
SDHD-208ENST00000534010 ABCA6Q8N139 1617 aa17.45■□□□□ 0.38
SDHD-208ENST00000534010 KIAA1107Q9UPP5 1409 aa17.45■□□□□ 0.38
SDHD-208ENST00000534010 MAP3K1Q13233 1512 aa17.44■□□□□ 0.38
SDHD-208ENST00000534010 C9orf84Q5VXU9 1444 aa17.44■□□□□ 0.38
SDHD-208ENST00000534010 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
SDHD-208ENST00000534010 AGLP35573 1532 aa17.42■□□□□ 0.38
SDHD-208ENST00000534010 MTUS2Q5JR59 1369 aa17.41■□□□□ 0.38
SDHD-208ENST00000534010 SYCP2Q9BX26 1530 aa17.41■□□□□ 0.38
SDHD-208ENST00000534010 INO80Q9ULG1 1556 aaPredicted RBP17.4■□□□□ 0.38
SDHD-208ENST00000534010 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
SDHD-208ENST00000534010 SUPT6HQ7KZ85 1726 aaKnown RBP17.38■□□□□ 0.37
SDHD-208ENST00000534010 PLEKHH2Q8IVE3 1493 aa17.38■□□□□ 0.37
SDHD-208ENST00000534010 MBD5Q9P267 1494 aa17.38■□□□□ 0.37
SDHD-208ENST00000534010 FER1L4A9Z1Z3 1794 aa17.38■□□□□ 0.37
SDHD-208ENST00000534010 CCNB3Q8WWL7 1395 aa17.37■□□□□ 0.37
SDHD-208ENST00000534010 NCOA2Q15596 1464 aa17.37■□□□□ 0.37
SDHD-208ENST00000534010 LRRC9Q6ZRR7 1453 aa17.36■□□□□ 0.37
SDHD-208ENST00000534010 PLXNC1O60486 1568 aa17.36■□□□□ 0.37
SDHD-208ENST00000534010 ATP7AQ04656 1500 aa17.32■□□□□ 0.36
SDHD-208ENST00000534010 CFDP1Q9UEE9 299 aaPredicted RBP17.32■□□□□ 0.36
SDHD-208ENST00000534010 ARID4BQ4LE39 1312 aaPredicted RBP17.31■□□□□ 0.36
SDHD-208ENST00000534010 LMTK3Q96Q04 1460 aa17.31■□□□□ 0.36
SDHD-208ENST00000534010 RTEL1-TNFRSF6BF6WH68 1400 aa17.29■□□□□ 0.36
SDHD-208ENST00000534010 ARHGEF5Q12774 1597 aa17.28■□□□□ 0.36
SDHD-208ENST00000534010 ZNF644Q9H582 1327 aaPredicted RBP17.28■□□□□ 0.36
SDHD-208ENST00000534010 HNRNPMP52272 730 aaKnown RBP eCLIP17.28■□□□□ 0.36
SDHD-208ENST00000534010 ADGBQ8N7X0 1667 aa17.26■□□□□ 0.35
SDHD-208ENST00000534010 CAMSAP2Q08AD1 1489 aa17.26■□□□□ 0.35
SDHD-208ENST00000534010 SETD1BQ9UPS6 1966 aaKnown RBP17.26■□□□□ 0.35
SDHD-208ENST00000534010 KANK4Q5T7N3 995 aaPredicted RBP17.25■□□□□ 0.35
SDHD-208ENST00000534010 SPAG9O60271 1321 aaKnown RBP17.24■□□□□ 0.35
SDHD-208ENST00000534010 MROH2AA6NES4 1674 aa17.24■□□□□ 0.35
SDHD-208ENST00000534010 C3P01024 1663 aa17.24■□□□□ 0.35
SDHD-208ENST00000534010 ZNF777Q9ULD5 760 aaPredicted RBP17.24■□□□□ 0.35
SDHD-208ENST00000534010 A2MP01023 1474 aa17.23■□□□□ 0.35
SDHD-208ENST00000534010 CCDC141Q6ZP82 1450 aa17.23■□□□□ 0.35
SDHD-208ENST00000534010 MIA2Q96PC5 1412 aa17.22■□□□□ 0.35
SDHD-208ENST00000534010 PREX1Q8TCU6 1659 aa17.21■□□□□ 0.35
SDHD-208ENST00000534010 MAST1Q9Y2H9 1570 aa17.21■□□□□ 0.35
SDHD-208ENST00000534010 MYOM3Q5VTT5 1437 aa17.21■□□□□ 0.34
SDHD-208ENST00000534010 MLECQ14165 292 aa17.19■□□□□ 0.34
SDHD-208ENST00000534010 RSPH4AQ5TD94 716 aa17.19■□□□□ 0.34
SDHD-208ENST00000534010 CNTLNQ9NXG0 1405 aa17.19■□□□□ 0.34
SDHD-208ENST00000534010 DHX29Q7Z478 1369 aaKnown RBP17.16■□□□□ 0.34
SDHD-208ENST00000534010 FAM135AQ9P2D6 1515 aa17.15■□□□□ 0.34
SDHD-208ENST00000534010 TCOF1Q13428 1488 aaKnown RBP17.13■□□□□ 0.33
SDHD-208ENST00000534010 CEBPAP49715 358 aaPredicted RBP17.12■□□□□ 0.33
SDHD-208ENST00000534010 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
SDHD-208ENST00000534010 CROCC2H7BZ55 1655 aa17.12■□□□□ 0.33
SDHD-208ENST00000534010 CLTCQ00610 1675 aaKnown RBP17.12■□□□□ 0.33
SDHD-208ENST00000534010 NPATQ14207 1427 aa17.12■□□□□ 0.33
SDHD-208ENST00000534010 PTPN23Q9H3S7 1636 aa17.1■□□□□ 0.33
SDHD-208ENST00000534010 STRCQ7RTU9 1775 aa17.1■□□□□ 0.33
SDHD-208ENST00000534010 MYT1LQ9UL68 1186 aa17.1■□□□□ 0.33
SDHD-208ENST00000534010 SHANK2Q9UPX8 1470 aa17.1■□□□□ 0.33
SDHD-208ENST00000534010 RNF17Q9BXT8 1623 aaKnown RBP17.1■□□□□ 0.33
SDHD-208ENST00000534010 EIF2AK4Q9P2K8 1649 aaKnown RBP17.09■□□□□ 0.33
SDHD-208ENST00000534010 FGD6Q6ZV73 1430 aa17.08■□□□□ 0.32
SDHD-208ENST00000534010 ZMYM3Q14202 1370 aa17.08■□□□□ 0.32
SDHD-208ENST00000534010 ZNF142P52746 1687 aaPredicted RBP17.07■□□□□ 0.32
SDHD-208ENST00000534010 DNMT1P26358 1616 aaKnown RBP17.07■□□□□ 0.32
SDHD-208ENST00000534010 MROH1Q8NDA8 1641 aa17.07■□□□□ 0.32
SDHD-208ENST00000534010 PTPRKQ15262 1439 aa17.07■□□□□ 0.32
SDHD-208ENST00000534010 ABCC5O15440 1437 aa17.05■□□□□ 0.32
SDHD-208ENST00000534010 UHRF1BP1Q6BDS2 1440 aa17.05■□□□□ 0.32
SDHD-208ENST00000534010 HSPA2P54652 639 aa17.04■□□□□ 0.32
SDHD-208ENST00000534010 KDM5DQ9BY66 1539 aa17.04■□□□□ 0.32
SDHD-208ENST00000534010 MYO3AQ8NEV4 1616 aa17.02■□□□□ 0.31
SDHD-208ENST00000534010 DUOX2Q9NRD8 1548 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms