RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 TIMELESSQ9UNS1 1208 aa22.35■■□□□ 1.17
ATP2C1-224ENST00000533801 KDM2AQ9Y2K7 1162 aa22.35■■□□□ 1.17
ATP2C1-224ENST00000533801 SENP3-EIF4A1A0A087X0R7 540 aa22.33■■□□□ 1.17
ATP2C1-224ENST00000533801 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
ATP2C1-224ENST00000533801 KIAA0556O60303 1618 aa22.31■■□□□ 1.16
ATP2C1-224ENST00000533801 TSPY4P0CV99 314 aa22.3■■□□□ 1.16
ATP2C1-224ENST00000533801 TSPY10P0CW01 314 aa22.3■■□□□ 1.16
ATP2C1-224ENST00000533801 EIF4G2P78344 907 aaKnown RBP eCLIP22.3■■□□□ 1.16
ATP2C1-224ENST00000533801 KDM6BO15054 1643 aa22.29■■□□□ 1.16
ATP2C1-224ENST00000533801 PKD2Q13563 968 aa22.29■■□□□ 1.16
ATP2C1-224ENST00000533801 MYT1LQ9UL68 1186 aa22.28■■□□□ 1.16
ATP2C1-224ENST00000533801 DAPK1P53355 1430 aa22.28■■□□□ 1.16
ATP2C1-224ENST00000533801 CEP170Q5SW79 1584 aa22.26■■□□□ 1.15
ATP2C1-224ENST00000533801 ABCC5O15440 1437 aa22.26■■□□□ 1.15
ATP2C1-224ENST00000533801 MAGI1Q96QZ7 1491 aaPredicted RBP22.25■■□□□ 1.15
ATP2C1-224ENST00000533801 MIA2Q96PC5 1412 aa22.24■■□□□ 1.15
ATP2C1-224ENST00000533801 PTPRGP23470 1445 aa22.23■■□□□ 1.15
ATP2C1-224ENST00000533801 TROQ12816 1431 aaPredicted RBP22.23■■□□□ 1.15
ATP2C1-224ENST00000533801 RAPGEF6Q8TEU7 1601 aa22.23■■□□□ 1.15
ATP2C1-224ENST00000533801 NBPF8Q3BBV2 869 aa22.22■■□□□ 1.15
ATP2C1-224ENST00000533801 HNRNPUQ00839 825 aaKnown RBP eCLIP22.2■■□□□ 1.15
ATP2C1-224ENST00000533801 RGL3Q3MIN7 710 aa22.2■■□□□ 1.15
ATP2C1-224ENST00000533801 FKBP8Q14318 412 aa22.2■■□□□ 1.14
ATP2C1-224ENST00000533801 SUPT16HQ9Y5B9 1047 aaKnown RBP22.2■■□□□ 1.14
ATP2C1-224ENST00000533801 FAM9BQ8IZU0 186 aa22.19■■□□□ 1.14
ATP2C1-224ENST00000533801 NUP155O75694 1391 aa22.17■■□□□ 1.14
ATP2C1-224ENST00000533801 ARHGEF11O15085 1522 aa22.17■■□□□ 1.14
ATP2C1-224ENST00000533801 WASHC2AQ641Q2 1341 aa22.17■■□□□ 1.14
ATP2C1-224ENST00000533801 TCOF1Q13428 1488 aaKnown RBP22.16■■□□□ 1.14
ATP2C1-224ENST00000533801 C11orf95C9JLR9 678 aaPredicted RBP22.15■■□□□ 1.14
ATP2C1-224ENST00000533801 CAMSAP2Q08AD1 1489 aa22.15■■□□□ 1.14
ATP2C1-224ENST00000533801 IRX6P78412 446 aaPredicted RBP22.15■■□□□ 1.14
ATP2C1-224ENST00000533801 KIF14Q15058 1648 aa22.14■■□□□ 1.13
ATP2C1-224ENST00000533801 NEFLP07196 543 aa22.13■■□□□ 1.13
ATP2C1-224ENST00000533801 GPATCH8Q9UKJ3 1502 aaKnown RBP22.13■■□□□ 1.13
ATP2C1-224ENST00000533801 ANKRD30AQ9BXX3 1397 aa22.12■■□□□ 1.13
ATP2C1-224ENST00000533801 DENND4BO75064 1496 aaPredicted RBP22.09■■□□□ 1.13
ATP2C1-224ENST00000533801 ATP10BO94823 1461 aa22.09■■□□□ 1.13
ATP2C1-224ENST00000533801 DCAF11Q8TEB1 546 aa22.08■■□□□ 1.13
ATP2C1-224ENST00000533801 PELP1Q8IZL8 1130 aaKnown RBP22.08■■□□□ 1.13
ATP2C1-224ENST00000533801 NUP160Q12769 1436 aa22.07■■□□□ 1.12
ATP2C1-224ENST00000533801 CCDC184Q52MB2 194 aa22.07■■□□□ 1.12
ATP2C1-224ENST00000533801 ANKRD30BQ9BXX2 1392 aa22.06■■□□□ 1.12
ATP2C1-224ENST00000533801 ANKRD50Q9ULJ7 1429 aa22.06■■□□□ 1.12
ATP2C1-224ENST00000533801 NCOA1Q15788 1441 aa22.06■■□□□ 1.12
ATP2C1-224ENST00000533801 MRS2Q9HD23 443 aa22.05■■□□□ 1.12
ATP2C1-224ENST00000533801 AKNAQ7Z591 1439 aa22.05■■□□□ 1.12
ATP2C1-224ENST00000533801 CARD11Q9BXL7 1154 aa22.02■■□□□ 1.12
ATP2C1-224ENST00000533801 ROCK1Q13464 1354 aa22.01■■□□□ 1.11
ATP2C1-224ENST00000533801 KIF15Q9NS87 1388 aa22.01■■□□□ 1.11
ATP2C1-224ENST00000533801 CCER2I3L3R5 266 aa22■■□□□ 1.11
ATP2C1-224ENST00000533801 C9orf84Q5VXU9 1444 aa22■■□□□ 1.11
ATP2C1-224ENST00000533801 DNMT1P26358 1616 aaKnown RBP21.97■■□□□ 1.11
ATP2C1-224ENST00000533801 GCC2Q8IWJ2 1684 aa21.96■■□□□ 1.11
ATP2C1-224ENST00000533801 KIF7Q2M1P5 1343 aa21.95■■□□□ 1.1
ATP2C1-224ENST00000533801 CCDC7Q96M83 1385 aa21.92■■□□□ 1.1
ATP2C1-224ENST00000533801 SENP3Q9H4L4 574 aaPredicted RBP21.92■■□□□ 1.1
ATP2C1-224ENST00000533801 RPRD2Q5VT52 1461 aaKnown RBP21.91■■□□□ 1.1
ATP2C1-224ENST00000533801 SALL2Q9Y467 1007 aaPredicted RBP21.91■■□□□ 1.1
ATP2C1-224ENST00000533801 PZPP20742 1482 aa21.9■■□□□ 1.1
ATP2C1-224ENST00000533801 KDM5BQ9UGL1 1544 aa21.9■■□□□ 1.1
ATP2C1-224ENST00000533801 KIAA1107Q9UPP5 1409 aa21.9■■□□□ 1.1
ATP2C1-224ENST00000533801 ERCC6L2Q5T890 1561 aa21.89■■□□□ 1.1
ATP2C1-224ENST00000533801 ST20-MTHFSA0A0A6YYL1 179 aa21.89■■□□□ 1.09
ATP2C1-224ENST00000533801 USP47Q96K76 1375 aa21.89■■□□□ 1.09
ATP2C1-224ENST00000533801 ARHGAP5Q13017 1502 aa21.89■■□□□ 1.09
ATP2C1-224ENST00000533801 PRKRIP1Q9H875 184 aaPredicted RBP21.88■■□□□ 1.09
ATP2C1-224ENST00000533801 AFAP1Q8N556 730 aa21.88■■□□□ 1.09
ATP2C1-224ENST00000533801 ITSN2Q9NZM3 1697 aa21.83■■□□□ 1.09
ATP2C1-224ENST00000533801 ABCA8O94911 1581 aa21.83■■□□□ 1.09
ATP2C1-224ENST00000533801 CHD1O14646 1710 aa21.82■■□□□ 1.08
ATP2C1-224ENST00000533801 EFCAB2Q5VUJ9 269 aa21.82■■□□□ 1.08
ATP2C1-224ENST00000533801 CNTLNQ9NXG0 1405 aa21.81■■□□□ 1.08
ATP2C1-224ENST00000533801 NBPF1Q3BBV0 1214 aa21.81■■□□□ 1.08
ATP2C1-224ENST00000533801 ABCC10Q5T3U5 1492 aa21.8■■□□□ 1.08
ATP2C1-224ENST00000533801 TEX14Q8IWB6 1497 aa21.8■■□□□ 1.08
ATP2C1-224ENST00000533801 ROCK2O75116 1388 aaKnown RBP21.79■■□□□ 1.08
ATP2C1-224ENST00000533801 CHGAP10645 457 aaKnown RBP21.77■■□□□ 1.08
ATP2C1-224ENST00000533801 TMC1Q8TDI8 760 aa21.77■■□□□ 1.08
ATP2C1-224ENST00000533801 SYCP2Q9BX26 1530 aa21.77■■□□□ 1.07
ATP2C1-224ENST00000533801 CDC42BPAQ5VT25 1732 aa21.77■■□□□ 1.07
ATP2C1-224ENST00000533801 CCDC141Q6ZP82 1450 aa21.74■■□□□ 1.07
ATP2C1-224ENST00000533801 CCDC144AA2RUR9 1427 aa21.74■■□□□ 1.07
ATP2C1-224ENST00000533801 SPAG9O60271 1321 aaKnown RBP21.73■■□□□ 1.07
ATP2C1-224ENST00000533801 PLEKHH2Q8IVE3 1493 aa21.72■■□□□ 1.07
ATP2C1-224ENST00000533801 CC2D1BQ5T0F9 858 aaKnown RBP21.71■■□□□ 1.07
ATP2C1-224ENST00000533801 KIF3BO15066 747 aa21.71■■□□□ 1.07
ATP2C1-224ENST00000533801 RSPH4AQ5TD94 716 aa21.7■■□□□ 1.07
ATP2C1-224ENST00000533801 NPM1P06748 294 aaKnown RBP eCLIP21.69■■□□□ 1.06
ATP2C1-224ENST00000533801 MBD5Q9P267 1494 aa21.69■■□□□ 1.06
ATP2C1-224ENST00000533801 ADGRL2O95490 1459 aa21.69■■□□□ 1.06
ATP2C1-224ENST00000533801 TSHZ2Q9NRE2 1034 aa21.67■■□□□ 1.06
ATP2C1-224ENST00000533801 TTC37Q6PGP7 1564 aa21.67■■□□□ 1.06
ATP2C1-224ENST00000533801 SAMD9LQ8IVG5 1584 aa21.66■■□□□ 1.06
ATP2C1-224ENST00000533801 ADGBQ8N7X0 1667 aa21.66■■□□□ 1.06
ATP2C1-224ENST00000533801 ADCY10Q96PN6 1610 aa21.63■■□□□ 1.05
ATP2C1-224ENST00000533801 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.63■■□□□ 1.054e-8■□□□□ 8.6
ATP2C1-224ENST00000533801 TRAPPC8Q9Y2L5 1435 aa21.62■■□□□ 1.05
ATP2C1-224ENST00000533801 GGT6Q6P531 493 aa21.61■■□□□ 1.05
ATP2C1-224ENST00000533801 SPATA31E1Q6ZUB1 1445 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms