RNA–Protein interactions for RNA: ENST00000533738.6

NUCB2-216, Transcript of nucleobindin 2, humanhuman

TSL 1 (best)

Gene NUCB2, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-216ENST00000533738 SCAPERQ9BY12 1400 aa19.04■□□□□ 0.64
NUCB2-216ENST00000533738 PREX2Q70Z35 1606 aa19.03■□□□□ 0.64
NUCB2-216ENST00000533738 POGZQ7Z3K3 1410 aa19.03■□□□□ 0.64
NUCB2-216ENST00000533738 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
NUCB2-216ENST00000533738 ZMYM4Q5VZL5 1548 aa19.03■□□□□ 0.64
NUCB2-216ENST00000533738 CDC42BPBQ9Y5S2 1711 aa19.02■□□□□ 0.63
NUCB2-216ENST00000533738 VPS8Q8N3P4 1428 aa19.01■□□□□ 0.63
NUCB2-216ENST00000533738 ARHGEF40Q8TER5 1519 aa19.01■□□□□ 0.63
NUCB2-216ENST00000533738 MTUS2Q5JR59 1369 aa19■□□□□ 0.63
NUCB2-216ENST00000533738 CDC42BPAQ5VT25 1732 aa18.99■□□□□ 0.63
NUCB2-216ENST00000533738 EHBP1L1Q8N3D4 1523 aa18.99■□□□□ 0.63
NUCB2-216ENST00000533738 ZFYVE16Q7Z3T8 1539 aa18.97■□□□□ 0.63
NUCB2-216ENST00000533738 GPATCH8Q9UKJ3 1502 aaKnown RBP18.97■□□□□ 0.63
NUCB2-216ENST00000533738 YEATS2Q9ULM3 1422 aa18.97■□□□□ 0.63
NUCB2-216ENST00000533738 MAGI2Q86UL8 1455 aa18.96■□□□□ 0.63
NUCB2-216ENST00000533738 ABCC1P33527 1531 aa18.95■□□□□ 0.62
NUCB2-216ENST00000533738 ZNF518AQ6AHZ1 1483 aa18.95■□□□□ 0.62
NUCB2-216ENST00000533738 ARHGEF12Q9NZN5 1544 aa18.95■□□□□ 0.62
NUCB2-216ENST00000533738 TIAM1Q13009 1591 aa18.94■□□□□ 0.62
NUCB2-216ENST00000533738 KDM5CP41229 1560 aa18.93■□□□□ 0.62
NUCB2-216ENST00000533738 CCNB3Q8WWL7 1395 aa18.93■□□□□ 0.62
NUCB2-216ENST00000533738 SAMD9LQ8IVG5 1584 aa18.92■□□□□ 0.62
NUCB2-216ENST00000533738 ITSN2Q9NZM3 1697 aa18.92■□□□□ 0.62
NUCB2-216ENST00000533738 AFAP1Q8N556 730 aa18.91■□□□□ 0.62
NUCB2-216ENST00000533738 TRAPPC8Q9Y2L5 1435 aa18.91■□□□□ 0.62
NUCB2-216ENST00000533738 SIGLEC1Q9BZZ2 1709 aa18.89■□□□□ 0.61
NUCB2-216ENST00000533738 ZNF777Q9ULD5 760 aaPredicted RBP18.89■□□□□ 0.61
NUCB2-216ENST00000533738 ARID4BQ4LE39 1312 aaPredicted RBP18.88■□□□□ 0.61
NUCB2-216ENST00000533738 HECW2Q9P2P5 1572 aa18.88■□□□□ 0.61
NUCB2-216ENST00000533738 ADAMTSL3P82987 1691 aa18.88■□□□□ 0.61
NUCB2-216ENST00000533738 BCORL1Q5H9F3 1711 aa18.88■□□□□ 0.61
NUCB2-216ENST00000533738 NCOA2Q15596 1464 aa18.87■□□□□ 0.61
NUCB2-216ENST00000533738 SYCP2Q9BX26 1530 aa18.87■□□□□ 0.61
NUCB2-216ENST00000533738 CFDP1Q9UEE9 299 aaPredicted RBP18.87■□□□□ 0.61
NUCB2-216ENST00000533738 LRRC9Q6ZRR7 1453 aa18.86■□□□□ 0.61
NUCB2-216ENST00000533738 SUPT6HQ7KZ85 1726 aaKnown RBP18.86■□□□□ 0.61
NUCB2-216ENST00000533738 MAP3K1Q13233 1512 aa18.85■□□□□ 0.61
NUCB2-216ENST00000533738 ATP10AO60312 1499 aa18.85■□□□□ 0.61
NUCB2-216ENST00000533738 MLH3Q9UHC1 1453 aa18.85■□□□□ 0.61
NUCB2-216ENST00000533738 C9orf84Q5VXU9 1444 aa18.84■□□□□ 0.61
NUCB2-216ENST00000533738 DIP2CQ9Y2E4 1556 aa18.84■□□□□ 0.61
NUCB2-216ENST00000533738 PLEKHH2Q8IVE3 1493 aa18.83■□□□□ 0.6
NUCB2-216ENST00000533738 KIAA1107Q9UPP5 1409 aa18.83■□□□□ 0.6
NUCB2-216ENST00000533738 ABCA6Q8N139 1617 aa18.82■□□□□ 0.6
NUCB2-216ENST00000533738 MADDQ8WXG6 1647 aa18.82■□□□□ 0.6
NUCB2-216ENST00000533738 HNRNPMP52272 730 aaKnown RBP eCLIP18.82■□□□□ 0.6
NUCB2-216ENST00000533738 KANK4Q5T7N3 995 aaPredicted RBP18.81■□□□□ 0.6
NUCB2-216ENST00000533738 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
NUCB2-216ENST00000533738 ZNF644Q9H582 1327 aaPredicted RBP18.8■□□□□ 0.6
NUCB2-216ENST00000533738 PTPRMP28827 1452 aa18.79■□□□□ 0.6
NUCB2-216ENST00000533738 KIDINS220Q9ULH0 1771 aa18.79■□□□□ 0.6
NUCB2-216ENST00000533738 REREQ9P2R6 1566 aa18.78■□□□□ 0.6
NUCB2-216ENST00000533738 MBD5Q9P267 1494 aa18.77■□□□□ 0.59
NUCB2-216ENST00000533738 CAMSAP2Q08AD1 1489 aa18.76■□□□□ 0.59
NUCB2-216ENST00000533738 SPAG9O60271 1321 aaKnown RBP18.75■□□□□ 0.59
NUCB2-216ENST00000533738 MLECQ14165 292 aa18.75■□□□□ 0.59
NUCB2-216ENST00000533738 INO80Q9ULG1 1556 aaPredicted RBP18.75■□□□□ 0.59
NUCB2-216ENST00000533738 RIMS1Q86UR5 1692 aaKnown RBP18.75■□□□□ 0.59
NUCB2-216ENST00000533738 ATP7AQ04656 1500 aa18.74■□□□□ 0.59
NUCB2-216ENST00000533738 AGLP35573 1532 aa18.71■□□□□ 0.59
NUCB2-216ENST00000533738 APLP2Q06481 763 aa18.71■□□□□ 0.59
NUCB2-216ENST00000533738 FER1L4A9Z1Z3 1794 aa18.7■□□□□ 0.58
NUCB2-216ENST00000533738 MYOM3Q5VTT5 1437 aa18.69■□□□□ 0.58
NUCB2-216ENST00000533738 CCDC141Q6ZP82 1450 aa18.69■□□□□ 0.58
NUCB2-216ENST00000533738 PLXNC1O60486 1568 aa18.67■□□□□ 0.58
NUCB2-216ENST00000533738 MIA2Q96PC5 1412 aa18.66■□□□□ 0.58
NUCB2-216ENST00000533738 ARHGEF5Q12774 1597 aa18.66■□□□□ 0.58
NUCB2-216ENST00000533738 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
NUCB2-216ENST00000533738 A2MP01023 1474 aa18.65■□□□□ 0.58
NUCB2-216ENST00000533738 PLPPR3Q6T4P5 718 aa18.63■□□□□ 0.57
NUCB2-216ENST00000533738 RSPH4AQ5TD94 716 aa18.62■□□□□ 0.57
NUCB2-216ENST00000533738 ADGBQ8N7X0 1667 aa18.62■□□□□ 0.57
NUCB2-216ENST00000533738 LMTK3Q96Q04 1460 aa18.58■□□□□ 0.57
NUCB2-216ENST00000533738 FGD6Q6ZV73 1430 aa18.57■□□□□ 0.56
NUCB2-216ENST00000533738 PTPN23Q9H3S7 1636 aa18.57■□□□□ 0.56
NUCB2-216ENST00000533738 CEBPAP49715 358 aaPredicted RBP18.57■□□□□ 0.56
NUCB2-216ENST00000533738 DHX29Q7Z478 1369 aaKnown RBP18.56■□□□□ 0.56
NUCB2-216ENST00000533738 MAST1Q9Y2H9 1570 aa18.56■□□□□ 0.56
NUCB2-216ENST00000533738 TCOF1Q13428 1488 aaKnown RBP18.55■□□□□ 0.56
NUCB2-216ENST00000533738 TSPY4P0CV99 314 aa18.55■□□□□ 0.56
NUCB2-216ENST00000533738 TSPY10P0CW01 314 aa18.55■□□□□ 0.56
NUCB2-216ENST00000533738 CNTLNQ9NXG0 1405 aa18.55■□□□□ 0.56
NUCB2-216ENST00000533738 ESF1Q9H501 851 aaKnown RBP18.54■□□□□ 0.56
NUCB2-216ENST00000533738 C3P01024 1663 aa18.53■□□□□ 0.56
NUCB2-216ENST00000533738 ABCC5O15440 1437 aa18.51■□□□□ 0.55
NUCB2-216ENST00000533738 GGT6Q6P531 493 aa18.51■□□□□ 0.55
NUCB2-216ENST00000533738 CROCC2H7BZ55 1655 aa18.5■□□□□ 0.55
NUCB2-216ENST00000533738 SHANK2Q9UPX8 1470 aa18.5■□□□□ 0.55
NUCB2-216ENST00000533738 MROH2AA6NES4 1674 aa18.5■□□□□ 0.55
NUCB2-216ENST00000533738 DAPK1P53355 1430 aa18.49■□□□□ 0.55
NUCB2-216ENST00000533738 CLTCQ00610 1675 aaKnown RBP18.49■□□□□ 0.55
NUCB2-216ENST00000533738 DNMT1P26358 1616 aaKnown RBP18.49■□□□□ 0.55
NUCB2-216ENST00000533738 PREX1Q8TCU6 1659 aa18.48■□□□□ 0.55
NUCB2-216ENST00000533738 ZMYM3Q14202 1370 aa18.47■□□□□ 0.55
NUCB2-216ENST00000533738 KIF3BO15066 747 aa18.47■□□□□ 0.55
NUCB2-216ENST00000533738 HSPA2P54652 639 aa18.46■□□□□ 0.55
NUCB2-216ENST00000533738 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
NUCB2-216ENST00000533738 UHRF1BP1Q6BDS2 1440 aa18.44■□□□□ 0.54
NUCB2-216ENST00000533738 KDM5DQ9BY66 1539 aa18.43■□□□□ 0.54
NUCB2-216ENST00000533738 DUOX2Q9NRD8 1548 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms