RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 ZFYVE16Q7Z3T8 1539 aa21.57■■□□□ 1.04
COPB1-209ENST00000533096 ARHGEF40Q8TER5 1519 aa21.56■■□□□ 1.04
COPB1-209ENST00000533096 MAGI2Q86UL8 1455 aa21.53■■□□□ 1.04
COPB1-209ENST00000533096 TTC37Q6PGP7 1564 aa21.53■■□□□ 1.04
COPB1-209ENST00000533096 ATP10AO60312 1499 aa21.52■■□□□ 1.03
COPB1-209ENST00000533096 HECW1Q76N89 1606 aa21.51■■□□□ 1.03
COPB1-209ENST00000533096 RICTORQ6R327 1708 aa21.51■■□□□ 1.03
COPB1-209ENST00000533096 EFCAB5A4FU69 1503 aa21.5■■□□□ 1.03
COPB1-209ENST00000533096 ESF1Q9H501 851 aaKnown RBP21.49■■□□□ 1.03
COPB1-209ENST00000533096 CFAP74Q9C0B2 1584 aa21.48■■□□□ 1.03
COPB1-209ENST00000533096 ZMYM4Q5VZL5 1548 aa21.47■■□□□ 1.03
COPB1-209ENST00000533096 DMRT2Q9Y5R5 561 aa21.47■■□□□ 1.03
COPB1-209ENST00000533096 FMN1Q68DA7 1419 aa21.45■■□□□ 1.02
COPB1-209ENST00000533096 C9orf84Q5VXU9 1444 aa21.44■■□□□ 1.02
COPB1-209ENST00000533096 SIGLEC1Q9BZZ2 1709 aa21.43■■□□□ 1.02
COPB1-209ENST00000533096 ZNF777Q9ULD5 760 aaPredicted RBP21.4■■□□□ 1.02
COPB1-209ENST00000533096 ARHGAP5Q13017 1502 aa21.39■■□□□ 1.01
COPB1-209ENST00000533096 ARHGAP35Q9NRY4 1499 aa21.39■■□□□ 1.01
COPB1-209ENST00000533096 TROQ12816 1431 aaPredicted RBP21.38■■□□□ 1.01
COPB1-209ENST00000533096 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
COPB1-209ENST00000533096 CLIP1P30622 1438 aa21.37■■□□□ 1.01
COPB1-209ENST00000533096 ARHGEF12Q9NZN5 1544 aa21.36■■□□□ 1.01
COPB1-209ENST00000533096 DISP3Q9P2K9 1392 aa21.36■■□□□ 1.01
COPB1-209ENST00000533096 ZNF518AQ6AHZ1 1483 aa21.35■■□□□ 1.01
COPB1-209ENST00000533096 UHRF1BP1Q6BDS2 1440 aa21.35■■□□□ 1.01
COPB1-209ENST00000533096 ILDR2Q71H61 639 aa21.32■■□□□ 1
COPB1-209ENST00000533096 FER1L4A9Z1Z3 1794 aa21.32■■□□□ 1
COPB1-209ENST00000533096 KIF14Q15058 1648 aa21.31■■□□□ 1
COPB1-209ENST00000533096 TRAPPC8Q9Y2L5 1435 aa21.3■■□□□ 1
COPB1-209ENST00000533096 HNRNPMP52272 730 aaKnown RBP eCLIP21.29■■□□□ 1
COPB1-209ENST00000533096 MYO5CQ9NQX4 1742 aa21.25■□□□□ 0.99
COPB1-209ENST00000533096 MLH3Q9UHC1 1453 aa21.23■□□□□ 0.99
COPB1-209ENST00000533096 SPAG9O60271 1321 aaKnown RBP21.22■□□□□ 0.99
COPB1-209ENST00000533096 NCKAP5LQ9HCH0 1330 aa21.22■□□□□ 0.99
COPB1-209ENST00000533096 GGT6Q6P531 493 aa21.21■□□□□ 0.99
COPB1-209ENST00000533096 PREX1Q8TCU6 1659 aa21.21■□□□□ 0.99
COPB1-209ENST00000533096 KDM5CP41229 1560 aa21.19■□□□□ 0.98
COPB1-209ENST00000533096 DIP2CQ9Y2E4 1556 aa21.19■□□□□ 0.98
COPB1-209ENST00000533096 PTPRTO14522 1441 aa21.19■□□□□ 0.98
COPB1-209ENST00000533096 SOCS7O14512 581 aa21.18■□□□□ 0.98
COPB1-209ENST00000533096 CFDP1Q9UEE9 299 aaPredicted RBP21.18■□□□□ 0.98
COPB1-209ENST00000533096 ZMYM3Q14202 1370 aa21.18■□□□□ 0.98
COPB1-209ENST00000533096 CASKIN1Q8WXD9 1431 aa21.18■□□□□ 0.98
COPB1-209ENST00000533096 STRCQ7RTU9 1775 aa21.15■□□□□ 0.98
COPB1-209ENST00000533096 UBAP1LF5GYI3 381 aa21.13■□□□□ 0.97
COPB1-209ENST00000533096 ABCA6Q8N139 1617 aa21.13■□□□□ 0.97
COPB1-209ENST00000533096 AGLP35573 1532 aa21.13■□□□□ 0.97
COPB1-209ENST00000533096 CNTLNQ9NXG0 1405 aa21.12■□□□□ 0.97
COPB1-209ENST00000533096 CCDC18Q5T9S5 1454 aa21.12■□□□□ 0.97
COPB1-209ENST00000533096 ZNF335Q9H4Z2 1342 aaPredicted RBP21.11■□□□□ 0.97
COPB1-209ENST00000533096 ABCC1P33527 1531 aa21.1■□□□□ 0.97
COPB1-209ENST00000533096 CDC42BPBQ9Y5S2 1711 aa21.1■□□□□ 0.97
COPB1-209ENST00000533096 NCOA1Q15788 1441 aa21.09■□□□□ 0.97
COPB1-209ENST00000533096 REREQ9P2R6 1566 aa21.09■□□□□ 0.97
COPB1-209ENST00000533096 C3P01024 1663 aa21.09■□□□□ 0.97
COPB1-209ENST00000533096 ZNF644Q9H582 1327 aaPredicted RBP21.08■□□□□ 0.97
COPB1-209ENST00000533096 SETD1BQ9UPS6 1966 aaKnown RBP21.08■□□□□ 0.96
COPB1-209ENST00000533096 CCNB3Q8WWL7 1395 aa21.08■□□□□ 0.96
COPB1-209ENST00000533096 GPATCH8Q9UKJ3 1502 aaKnown RBP21.07■□□□□ 0.96
COPB1-209ENST00000533096 LRRIQ1Q96JM4 1722 aa21.06■□□□□ 0.96
COPB1-209ENST00000533096 PKD2Q13563 968 aa21.05■□□□□ 0.96
COPB1-209ENST00000533096 PREX2Q70Z35 1606 aa21.04■□□□□ 0.96
COPB1-209ENST00000533096 CAMSAP1Q5T5Y3 1602 aa21.04■□□□□ 0.96
COPB1-209ENST00000533096 LTBP4Q8N2S1 1624 aa21.04■□□□□ 0.96
COPB1-209ENST00000533096 NPATQ14207 1427 aa21.04■□□□□ 0.96
COPB1-209ENST00000533096 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
COPB1-209ENST00000533096 KIDINS220Q9ULH0 1771 aa21.03■□□□□ 0.96
COPB1-209ENST00000533096 SAMD9LQ8IVG5 1584 aa21.03■□□□□ 0.96
COPB1-209ENST00000533096 MTUS2Q5JR59 1369 aa21.02■□□□□ 0.96
COPB1-209ENST00000533096 SYCP2Q9BX26 1530 aa21.01■□□□□ 0.95
COPB1-209ENST00000533096 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
COPB1-209ENST00000533096 ITSN2Q9NZM3 1697 aa21.01■□□□□ 0.95
COPB1-209ENST00000533096 A2MP01023 1474 aa21■□□□□ 0.95
COPB1-209ENST00000533096 KIAA1107Q9UPP5 1409 aa20.99■□□□□ 0.95
COPB1-209ENST00000533096 PIP4K2BP78356 416 aa20.99■□□□□ 0.95
COPB1-209ENST00000533096 FBXO31Q5XUX0 539 aaPredicted RBP20.99■□□□□ 0.95
COPB1-209ENST00000533096 FYCO1Q9BQS8 1478 aa20.99■□□□□ 0.95
COPB1-209ENST00000533096 KIF3BO15066 747 aa20.98■□□□□ 0.95
COPB1-209ENST00000533096 PTPRKQ15262 1439 aa20.96■□□□□ 0.95
COPB1-209ENST00000533096 CDC42BPAQ5VT25 1732 aa20.95■□□□□ 0.94
COPB1-209ENST00000533096 SUPT6HQ7KZ85 1726 aaKnown RBP20.95■□□□□ 0.94
COPB1-209ENST00000533096 PLEKHH2Q8IVE3 1493 aa20.94■□□□□ 0.94
COPB1-209ENST00000533096 ATP7AQ04656 1500 aa20.94■□□□□ 0.94
COPB1-209ENST00000533096 IQSEC2Q5JU85 1478 aa20.92■□□□□ 0.94
COPB1-209ENST00000533096 SPATA31D1Q6ZQQ2 1576 aa20.92■□□□□ 0.94
COPB1-209ENST00000533096 WASHC2CQ9Y4E1 1318 aa20.91■□□□□ 0.94
COPB1-209ENST00000533096 HSPA1LP34931 641 aa20.9■□□□□ 0.94
COPB1-209ENST00000533096 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
COPB1-209ENST00000533096 DHX29Q7Z478 1369 aaKnown RBP20.89■□□□□ 0.93
COPB1-209ENST00000533096 TOM1O60784 492 aa20.88■□□□□ 0.93
COPB1-209ENST00000533096 ANKLE2Q86XL3 938 aa20.88■□□□□ 0.93
COPB1-209ENST00000533096 CLTCQ00610 1675 aaKnown RBP20.88■□□□□ 0.93
COPB1-209ENST00000533096 TNRQ92752 1358 aa20.85■□□□□ 0.93
COPB1-209ENST00000533096 THEMISQ8N1K5 641 aaPredicted RBP20.85■□□□□ 0.93
COPB1-209ENST00000533096 PLA2R1Q13018 1463 aa20.85■□□□□ 0.93
COPB1-209ENST00000533096 TCOF1Q13428 1488 aaKnown RBP20.84■□□□□ 0.93
COPB1-209ENST00000533096 TSPY4P0CV99 314 aa20.84■□□□□ 0.93
COPB1-209ENST00000533096 TSPY10P0CW01 314 aa20.84■□□□□ 0.93
COPB1-209ENST00000533096 MROH2AA6NES4 1674 aa20.83■□□□□ 0.93
COPB1-209ENST00000533096 MBD5Q9P267 1494 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms