RNA–Protein interactions for RNA: ENST00000532500.1

CPNE7-206, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-206ENST00000532500 TROQ12816 1431 aaPredicted RBP18.59■□□□□ 0.57
CPNE7-206ENST00000532500 CDK11AQ9UQ88 783 aaPredicted RBP18.59■□□□□ 0.57
CPNE7-206ENST00000532500 ZMYM4Q5VZL5 1548 aa18.59■□□□□ 0.57
CPNE7-206ENST00000532500 SCAPERQ9BY12 1400 aa18.58■□□□□ 0.57
CPNE7-206ENST00000532500 YEATS2Q9ULM3 1422 aa18.58■□□□□ 0.57
CPNE7-206ENST00000532500 CDC42BPAQ5VT25 1732 aa18.58■□□□□ 0.57
CPNE7-206ENST00000532500 CLIP1P30622 1438 aa18.57■□□□□ 0.56
CPNE7-206ENST00000532500 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
CPNE7-206ENST00000532500 CASKIN1Q8WXD9 1431 aa18.57■□□□□ 0.56
CPNE7-206ENST00000532500 PREX2Q70Z35 1606 aa18.56■□□□□ 0.56
CPNE7-206ENST00000532500 FER1L4A9Z1Z3 1794 aa18.56■□□□□ 0.56
CPNE7-206ENST00000532500 PTPRMP28827 1452 aa18.56■□□□□ 0.56
CPNE7-206ENST00000532500 CCDC18Q5T9S5 1454 aa18.55■□□□□ 0.56
CPNE7-206ENST00000532500 POGZQ7Z3K3 1410 aa18.55■□□□□ 0.56
CPNE7-206ENST00000532500 FYCO1Q9BQS8 1478 aa18.53■□□□□ 0.56
CPNE7-206ENST00000532500 MLECQ14165 292 aa18.52■□□□□ 0.56
CPNE7-206ENST00000532500 EFCAB2Q5VUJ9 269 aa18.52■□□□□ 0.56
CPNE7-206ENST00000532500 ITSN2Q9NZM3 1697 aa18.52■□□□□ 0.56
CPNE7-206ENST00000532500 MYT1LQ9UL68 1186 aa18.5■□□□□ 0.55
CPNE7-206ENST00000532500 MAGI2Q86UL8 1455 aa18.46■□□□□ 0.55
CPNE7-206ENST00000532500 ABCA6Q8N139 1617 aa18.46■□□□□ 0.55
CPNE7-206ENST00000532500 ABCC1P33527 1531 aa18.45■□□□□ 0.54
CPNE7-206ENST00000532500 AFAP1Q8N556 730 aa18.45■□□□□ 0.54
CPNE7-206ENST00000532500 ZNF518AQ6AHZ1 1483 aa18.45■□□□□ 0.54
CPNE7-206ENST00000532500 KDM5CP41229 1560 aa18.44■□□□□ 0.54
CPNE7-206ENST00000532500 DIP2CQ9Y2E4 1556 aa18.43■□□□□ 0.54
CPNE7-206ENST00000532500 ATP10AO60312 1499 aa18.43■□□□□ 0.54
CPNE7-206ENST00000532500 ZNF777Q9ULD5 760 aaPredicted RBP18.42■□□□□ 0.54
CPNE7-206ENST00000532500 ARHGEF12Q9NZN5 1544 aa18.42■□□□□ 0.54
CPNE7-206ENST00000532500 SAMD9LQ8IVG5 1584 aa18.42■□□□□ 0.54
CPNE7-206ENST00000532500 C9orf84Q5VXU9 1444 aa18.41■□□□□ 0.54
CPNE7-206ENST00000532500 CEP162Q5TB80 1403 aa18.4■□□□□ 0.54
CPNE7-206ENST00000532500 TRAPPC8Q9Y2L5 1435 aa18.4■□□□□ 0.54
CPNE7-206ENST00000532500 KIDINS220Q9ULH0 1771 aa18.4■□□□□ 0.54
CPNE7-206ENST00000532500 SYCP2Q9BX26 1530 aa18.39■□□□□ 0.53
CPNE7-206ENST00000532500 SUPT6HQ7KZ85 1726 aaKnown RBP18.37■□□□□ 0.53
CPNE7-206ENST00000532500 LMTK3Q96Q04 1460 aa18.36■□□□□ 0.53
CPNE7-206ENST00000532500 MTUS2Q5JR59 1369 aa18.35■□□□□ 0.53
CPNE7-206ENST00000532500 ILDR1Q86SU0 546 aaPredicted RBP18.35■□□□□ 0.53
CPNE7-206ENST00000532500 GPATCH8Q9UKJ3 1502 aaKnown RBP18.34■□□□□ 0.53
CPNE7-206ENST00000532500 LOC105371045A0A1W2PR82 267 aa18.34■□□□□ 0.53
CPNE7-206ENST00000532500 HSPA2P54652 639 aa18.33■□□□□ 0.52
CPNE7-206ENST00000532500 PREX1Q8TCU6 1659 aa18.33■□□□□ 0.52
CPNE7-206ENST00000532500 TIAM1Q13009 1591 aa18.33■□□□□ 0.52
CPNE7-206ENST00000532500 C3P01024 1663 aa18.32■□□□□ 0.52
CPNE7-206ENST00000532500 MLH3Q9UHC1 1453 aa18.32■□□□□ 0.52
CPNE7-206ENST00000532500 CCNB3Q8WWL7 1395 aa18.31■□□□□ 0.52
CPNE7-206ENST00000532500 CEBPAP49715 358 aaPredicted RBP18.31■□□□□ 0.52
CPNE7-206ENST00000532500 HNRNPMP52272 730 aaKnown RBP eCLIP18.31■□□□□ 0.52
CPNE7-206ENST00000532500 EHBP1L1Q8N3D4 1523 aa18.31■□□□□ 0.52
CPNE7-206ENST00000532500 REREQ9P2R6 1566 aa18.3■□□□□ 0.52
CPNE7-206ENST00000532500 CFDP1Q9UEE9 299 aaPredicted RBP18.28■□□□□ 0.52
CPNE7-206ENST00000532500 INO80Q9ULG1 1556 aaPredicted RBP18.27■□□□□ 0.52
CPNE7-206ENST00000532500 ATP7AQ04656 1500 aa18.27■□□□□ 0.51
CPNE7-206ENST00000532500 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
CPNE7-206ENST00000532500 ZNF644Q9H582 1327 aaPredicted RBP18.24■□□□□ 0.51
CPNE7-206ENST00000532500 CLTCQ00610 1675 aaKnown RBP18.24■□□□□ 0.51
CPNE7-206ENST00000532500 SETD1BQ9UPS6 1966 aaKnown RBP18.24■□□□□ 0.51
CPNE7-206ENST00000532500 ADGBQ8N7X0 1667 aa18.22■□□□□ 0.51
CPNE7-206ENST00000532500 AGLP35573 1532 aa18.22■□□□□ 0.51
CPNE7-206ENST00000532500 PLEKHH2Q8IVE3 1493 aa18.21■□□□□ 0.51
CPNE7-206ENST00000532500 ESF1Q9H501 851 aaKnown RBP18.21■□□□□ 0.51
CPNE7-206ENST00000532500 NCOA2Q15596 1464 aa18.2■□□□□ 0.5
CPNE7-206ENST00000532500 STRCQ7RTU9 1775 aa18.19■□□□□ 0.5
CPNE7-206ENST00000532500 MROH2AA6NES4 1674 aa18.18■□□□□ 0.5
CPNE7-206ENST00000532500 KIAA1107Q9UPP5 1409 aa18.17■□□□□ 0.5
CPNE7-206ENST00000532500 PLXNC1O60486 1568 aa18.17■□□□□ 0.5
CPNE7-206ENST00000532500 VPS8Q8N3P4 1428 aa18.16■□□□□ 0.5
CPNE7-206ENST00000532500 A2MP01023 1474 aa18.16■□□□□ 0.5
CPNE7-206ENST00000532500 CAMSAP2Q08AD1 1489 aa18.16■□□□□ 0.5
CPNE7-206ENST00000532500 UHRF1BP1Q6BDS2 1440 aa18.15■□□□□ 0.5
CPNE7-206ENST00000532500 MBD5Q9P267 1494 aa18.13■□□□□ 0.49
CPNE7-206ENST00000532500 LRRC9Q6ZRR7 1453 aa18.12■□□□□ 0.49
CPNE7-206ENST00000532500 GGT6Q6P531 493 aa18.11■□□□□ 0.49
CPNE7-206ENST00000532500 CCDC141Q6ZP82 1450 aa18.09■□□□□ 0.49
CPNE7-206ENST00000532500 CNTLNQ9NXG0 1405 aa18.08■□□□□ 0.49
CPNE7-206ENST00000532500 KANK4Q5T7N3 995 aaPredicted RBP18.08■□□□□ 0.48
CPNE7-206ENST00000532500 MYO3AQ8NEV4 1616 aa18.07■□□□□ 0.48
CPNE7-206ENST00000532500 CFAP65Q6ZU64 1925 aaKnown RBP18.06■□□□□ 0.48
CPNE7-206ENST00000532500 FBXO41Q8TF61 875 aa18.05■□□□□ 0.48
CPNE7-206ENST00000532500 ZMYM3Q14202 1370 aa18.04■□□□□ 0.48
CPNE7-206ENST00000532500 ARHGEF5Q12774 1597 aa18.04■□□□□ 0.48
CPNE7-206ENST00000532500 ZNF142P52746 1687 aaPredicted RBP18.03■□□□□ 0.48
CPNE7-206ENST00000532500 CAMSAP1Q5T5Y3 1602 aa18.02■□□□□ 0.48
CPNE7-206ENST00000532500 RTEL1-TNFRSF6BF6WH68 1400 aa18.02■□□□□ 0.48
CPNE7-206ENST00000532500 KIF3BO15066 747 aa18■□□□□ 0.47
CPNE7-206ENST00000532500 DHX29Q7Z478 1369 aaKnown RBP18■□□□□ 0.47
CPNE7-206ENST00000532500 CROCC2H7BZ55 1655 aa17.99■□□□□ 0.47
CPNE7-206ENST00000532500 MAP3K1Q13233 1512 aa17.99■□□□□ 0.47
CPNE7-206ENST00000532500 CEP170BQ9Y4F5 1589 aaPredicted RBP17.99■□□□□ 0.47
CPNE7-206ENST00000532500 NPATQ14207 1427 aa17.98■□□□□ 0.47
CPNE7-206ENST00000532500 CEP152O94986 1710 aa17.98■□□□□ 0.47
CPNE7-206ENST00000532500 PTPRKQ15262 1439 aa17.98■□□□□ 0.47
CPNE7-206ENST00000532500 MYOM3Q5VTT5 1437 aa17.98■□□□□ 0.47
CPNE7-206ENST00000532500 CERKQ8TCT0 537 aa17.97■□□□□ 0.47
CPNE7-206ENST00000532500 PTPN23Q9H3S7 1636 aa17.97■□□□□ 0.47
CPNE7-206ENST00000532500 TSPY4P0CV99 314 aa17.96■□□□□ 0.47
CPNE7-206ENST00000532500 TSPY10P0CW01 314 aa17.96■□□□□ 0.47
CPNE7-206ENST00000532500 APLP2Q06481 763 aa17.96■□□□□ 0.47
CPNE7-206ENST00000532500 MAST1Q9Y2H9 1570 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms