RNA–Protein interactions for RNA: ENST00000532500.1

CPNE7-206, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-206ENST00000532500 NISCHQ9Y2I1 1504 aa28.38■■■□□ 2.13
CPNE7-206ENST00000532500 CCDC180Q9P1Z9 1646 aa25.47■■□□□ 1.67
CPNE7-206ENST00000532500 ABCC9O60706 1549 aa25.37■■□□□ 1.65
CPNE7-206ENST00000532500 RB1CC1Q8TDY2 1594 aa24.15■■□□□ 1.46
CPNE7-206ENST00000532500 DCAF8L2P0C7V8 631 aa24.02■■□□□ 1.44
CPNE7-206ENST00000532500 NACADO15069 1562 aa23.95■■□□□ 1.43
CPNE7-206ENST00000532500 UNC13AQ9UPW8 1703 aa23.83■■□□□ 1.41
CPNE7-206ENST00000532500 PABPN1Q86U42 306 aaKnown RBP eCLIP23.62■■□□□ 1.37
CPNE7-206ENST00000532500 DNAJC5BQ9UF47 199 aa23.59■■□□□ 1.37
CPNE7-206ENST00000532500 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
CPNE7-206ENST00000532500 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
CPNE7-206ENST00000532500 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
CPNE7-206ENST00000532500 DCAF1Q9Y4B6 1507 aa23.35■■□□□ 1.33
CPNE7-206ENST00000532500 SCRIBQ14160 1630 aa23.33■■□□□ 1.33
CPNE7-206ENST00000532500 SHROOM4Q9ULL8 1493 aa22.96■■□□□ 1.27
CPNE7-206ENST00000532500 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
CPNE7-206ENST00000532500 EIF4G1Q04637 1599 aaKnown RBP22.86■■□□□ 1.25
CPNE7-206ENST00000532500 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
CPNE7-206ENST00000532500 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
CPNE7-206ENST00000532500 ATAD2BQ9ULI0 1458 aa22.08■■□□□ 1.12
CPNE7-206ENST00000532500 NCAPD3P42695 1498 aa22.05■■□□□ 1.12
CPNE7-206ENST00000532500 SMARCA2P51531 1590 aa22.04■■□□□ 1.12
CPNE7-206ENST00000532500 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
CPNE7-206ENST00000532500 HMGXB3Q12766 1538 aa21.97■■□□□ 1.11
CPNE7-206ENST00000532500 MROH2BQ7Z745 1585 aa21.93■■□□□ 1.1
CPNE7-206ENST00000532500 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
CPNE7-206ENST00000532500 ERCC6Q03468 1493 aa21.87■■□□□ 1.09
CPNE7-206ENST00000532500 NESP48681 1621 aa21.85■■□□□ 1.09
CPNE7-206ENST00000532500 PEG3Q9GZU2 1588 aa21.85■■□□□ 1.09
CPNE7-206ENST00000532500 WIZO95785 1651 aa21.78■■□□□ 1.08
CPNE7-206ENST00000532500 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
CPNE7-206ENST00000532500 CUX2O14529 1486 aa21.66■■□□□ 1.06
CPNE7-206ENST00000532500 LAMC3Q9Y6N6 1575 aa21.63■■□□□ 1.05
CPNE7-206ENST00000532500 THOC2Q8NI27 1593 aaKnown RBP21.59■■□□□ 1.05
CPNE7-206ENST00000532500 DNAJC5Q9H3Z4 198 aa21.47■■□□□ 1.03
CPNE7-206ENST00000532500 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
CPNE7-206ENST00000532500 PDS5BQ9NTI5 1447 aa21.44■■□□□ 1.02
CPNE7-206ENST00000532500 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
CPNE7-206ENST00000532500 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.01
CPNE7-206ENST00000532500 MRC2Q9UBG0 1479 aa21.31■■□□□ 1
CPNE7-206ENST00000532500 CEP164Q9UPV0 1460 aa21.27■■□□□ 1
CPNE7-206ENST00000532500 PRDM2Q13029 1718 aa21.27■■□□□ 1
CPNE7-206ENST00000532500 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
CPNE7-206ENST00000532500 WDR62O43379 1518 aa21.24■□□□□ 0.99
CPNE7-206ENST00000532500 CFTRP13569 1480 aa21.2■□□□□ 0.98
CPNE7-206ENST00000532500 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
CPNE7-206ENST00000532500 URB2Q14146 1524 aaKnown RBP21.09■□□□□ 0.97
CPNE7-206ENST00000532500 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
CPNE7-206ENST00000532500 DNMBPQ6XZF7 1577 aa20.83■□□□□ 0.92
CPNE7-206ENST00000532500 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.92
CPNE7-206ENST00000532500 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
CPNE7-206ENST00000532500 TRIM41Q8WV44 630 aa20.78■□□□□ 0.92
CPNE7-206ENST00000532500 EIF4G3O43432 1585 aaKnown RBP20.77■□□□□ 0.92
CPNE7-206ENST00000532500 SUPT5HO00267 1087 aaKnown RBP20.75■□□□□ 0.91
CPNE7-206ENST00000532500 ABCC8Q09428 1581 aa20.74■□□□□ 0.91
CPNE7-206ENST00000532500 TARBP1Q13395 1621 aaKnown RBP20.71■□□□□ 0.91
CPNE7-206ENST00000532500 CHD1O14646 1710 aa20.7■□□□□ 0.9
CPNE7-206ENST00000532500 OSCARQ8IYS5 282 aa20.69■□□□□ 0.9
CPNE7-206ENST00000532500 POLA1P09884 1462 aaPredicted RBP20.66■□□□□ 0.9
CPNE7-206ENST00000532500 AQRO60306 1485 aaKnown RBP eCLIP20.64■□□□□ 0.892e-8■■■■■ 31.9
CPNE7-206ENST00000532500 RAD54L2Q9Y4B4 1467 aa20.63■□□□□ 0.89
CPNE7-206ENST00000532500 CUX1P39880 1505 aa20.6■□□□□ 0.89
CPNE7-206ENST00000532500 FGD5Q6ZNL6 1462 aa20.59■□□□□ 0.89
CPNE7-206ENST00000532500 RIMBP3CA6NJZ7 1639 aa20.58■□□□□ 0.89
CPNE7-206ENST00000532500 RIMBP3BA6NNM3 1639 aa20.58■□□□□ 0.89
CPNE7-206ENST00000532500 RIMBP3Q9UFD9 1639 aa20.58■□□□□ 0.89
CPNE7-206ENST00000532500 SOGA1O94964 1423 aa20.55■□□□□ 0.88
CPNE7-206ENST00000532500 TDRD9Q8NDG6 1382 aaKnown RBP20.53■□□□□ 0.88
CPNE7-206ENST00000532500 FBLN2P98095 1184 aa20.52■□□□□ 0.88
CPNE7-206ENST00000532500 WDR97A6NE52 1622 aa20.51■□□□□ 0.87
CPNE7-206ENST00000532500 PBRM1Q86U86 1689 aa20.48■□□□□ 0.87
CPNE7-206ENST00000532500 ARHGEF11O15085 1522 aa20.46■□□□□ 0.87
CPNE7-206ENST00000532500 SNAPC4Q5SXM2 1469 aa20.44■□□□□ 0.86
CPNE7-206ENST00000532500 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
CPNE7-206ENST00000532500 SYNJ1O43426 1573 aa20.34■□□□□ 0.85
CPNE7-206ENST00000532500 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
CPNE7-206ENST00000532500 ABCA5Q8WWZ7 1642 aa20.34■□□□□ 0.85
CPNE7-206ENST00000532500 GAPVD1Q14C86 1478 aa20.32■□□□□ 0.84
CPNE7-206ENST00000532500 MAGI1Q96QZ7 1491 aaPredicted RBP20.31■□□□□ 0.84
CPNE7-206ENST00000532500 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
CPNE7-206ENST00000532500 TOP2BQ02880 1626 aa20.3■□□□□ 0.84
CPNE7-206ENST00000532500 CYB5RLQ6IPT4 315 aa20.29■□□□□ 0.84
CPNE7-206ENST00000532500 ABCA10Q8WWZ4 1543 aa20.28■□□□□ 0.84
CPNE7-206ENST00000532500 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.84
CPNE7-206ENST00000532500 SYNJ2O15056 1496 aa20.26■□□□□ 0.83
CPNE7-206ENST00000532500 ARAP1Q96P48 1450 aa20.26■□□□□ 0.83
CPNE7-206ENST00000532500 WRNQ14191 1432 aaPredicted RBP eCLIP20.26■□□□□ 0.83
CPNE7-206ENST00000532500 ADAMTS12P58397 1594 aa20.18■□□□□ 0.82
CPNE7-206ENST00000532500 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
CPNE7-206ENST00000532500 CEP170Q5SW79 1584 aa20.1■□□□□ 0.81
CPNE7-206ENST00000532500 ERCC6L2Q5T890 1561 aa20.07■□□□□ 0.8
CPNE7-206ENST00000532500 TRHP20396 242 aaPredicted RBP20.06■□□□□ 0.8
CPNE7-206ENST00000532500 ERICH3Q5RHP9 1530 aa20.05■□□□□ 0.8
CPNE7-206ENST00000532500 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.79
CPNE7-206ENST00000532500 NUP160Q12769 1436 aa19.98■□□□□ 0.79
CPNE7-206ENST00000532500 SHROOM2Q13796 1616 aa19.96■□□□□ 0.79
CPNE7-206ENST00000532500 RUSC2Q8N2Y8 1516 aa19.9■□□□□ 0.78
CPNE7-206ENST00000532500 CUL7Q14999 1698 aa19.87■□□□□ 0.77
CPNE7-206ENST00000532500 KIF27Q86VH2 1401 aa19.84■□□□□ 0.77
CPNE7-206ENST00000532500 PRG4Q92954 1404 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms