RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 SOCS7O14512 581 aa14.03□□□□□ -0.16
NUP98-219ENST00000532475 RIMS1Q86UR5 1692 aaKnown RBP14.03□□□□□ -0.16
NUP98-219ENST00000532475 FHOD3Q2V2M9 1422 aa14.02□□□□□ -0.16
NUP98-219ENST00000532475 NUP153P49790 1475 aaKnown RBP14.01□□□□□ -0.17
NUP98-219ENST00000532475 FANCAO15360 1455 aa13.99□□□□□ -0.17
NUP98-219ENST00000532475 POGZQ7Z3K3 1410 aa13.98□□□□□ -0.17
NUP98-219ENST00000532475 SIGLEC1Q9BZZ2 1709 aa13.98□□□□□ -0.17
NUP98-219ENST00000532475 RAPGEF6Q8TEU7 1601 aa13.97□□□□□ -0.17
NUP98-219ENST00000532475 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
NUP98-219ENST00000532475 ARHGEF40Q8TER5 1519 aa13.96□□□□□ -0.17
NUP98-219ENST00000532475 RICTORQ6R327 1708 aa13.95□□□□□ -0.18
NUP98-219ENST00000532475 SAMD9Q5K651 1589 aa13.94□□□□□ -0.18
NUP98-219ENST00000532475 SCAPERQ9BY12 1400 aa13.94□□□□□ -0.18
NUP98-219ENST00000532475 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
NUP98-219ENST00000532475 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
NUP98-219ENST00000532475 ZFYVE16Q7Z3T8 1539 aa13.92□□□□□ -0.18
NUP98-219ENST00000532475 DMRT2Q9Y5R5 561 aa13.92□□□□□ -0.18
NUP98-219ENST00000532475 HECW1Q76N89 1606 aa13.9□□□□□ -0.18
NUP98-219ENST00000532475 AFAP1Q8N556 730 aa13.9□□□□□ -0.18
NUP98-219ENST00000532475 MAGI2Q86UL8 1455 aa13.9□□□□□ -0.18
NUP98-219ENST00000532475 ZMYM4Q5VZL5 1548 aa13.9□□□□□ -0.19
NUP98-219ENST00000532475 ATP10AO60312 1499 aa13.89□□□□□ -0.19
NUP98-219ENST00000532475 PLCH2O75038 1416 aa13.89□□□□□ -0.19
NUP98-219ENST00000532475 TTC37Q6PGP7 1564 aa13.88□□□□□ -0.19
NUP98-219ENST00000532475 EFCAB5A4FU69 1503 aa13.88□□□□□ -0.19
NUP98-219ENST00000532475 EFCAB2Q5VUJ9 269 aa13.87□□□□□ -0.19
NUP98-219ENST00000532475 ATP1B4Q9UN42 357 aaPredicted RBP13.87□□□□□ -0.19
NUP98-219ENST00000532475 ARHGEF12Q9NZN5 1544 aa13.86□□□□□ -0.19
NUP98-219ENST00000532475 FKBP8Q14318 412 aa13.86□□□□□ -0.19
NUP98-219ENST00000532475 STRCQ7RTU9 1775 aa13.85□□□□□ -0.19
NUP98-219ENST00000532475 FER1L4A9Z1Z3 1794 aa13.84□□□□□ -0.19
NUP98-219ENST00000532475 MYT1LQ9UL68 1186 aa13.84□□□□□ -0.19
NUP98-219ENST00000532475 CDK13Q14004 1512 aaKnown RBP13.84□□□□□ -0.19
NUP98-219ENST00000532475 C9orf84Q5VXU9 1444 aa13.83□□□□□ -0.2
NUP98-219ENST00000532475 UHRF1BP1Q6BDS2 1440 aa13.82□□□□□ -0.2
NUP98-219ENST00000532475 CFAP74Q9C0B2 1584 aa13.81□□□□□ -0.2
NUP98-219ENST00000532475 SETD1BQ9UPS6 1966 aaKnown RBP13.8□□□□□ -0.2
NUP98-219ENST00000532475 PTPRTO14522 1441 aa13.8□□□□□ -0.2
NUP98-219ENST00000532475 PREX1Q8TCU6 1659 aa13.79□□□□□ -0.2
NUP98-219ENST00000532475 LTBP4Q8N2S1 1624 aa13.78□□□□□ -0.2
NUP98-219ENST00000532475 ESF1Q9H501 851 aaKnown RBP13.76□□□□□ -0.21
NUP98-219ENST00000532475 SPATA31D1Q6ZQQ2 1576 aa13.75□□□□□ -0.21
NUP98-219ENST00000532475 TRAPPC8Q9Y2L5 1435 aa13.75□□□□□ -0.21
NUP98-219ENST00000532475 NCKAP5LQ9HCH0 1330 aa13.75□□□□□ -0.21
NUP98-219ENST00000532475 CDK11AQ9UQ88 783 aaPredicted RBP13.75□□□□□ -0.21
NUP98-219ENST00000532475 UBAP1LF5GYI3 381 aa13.74□□□□□ -0.21
NUP98-219ENST00000532475 ZNF518AQ6AHZ1 1483 aa13.74□□□□□ -0.21
NUP98-219ENST00000532475 ZNF335Q9H4Z2 1342 aaPredicted RBP13.73□□□□□ -0.21
NUP98-219ENST00000532475 UBTFP17480 764 aaKnown RBP13.71□□□□□ -0.21
NUP98-219ENST00000532475 NCOA1Q15788 1441 aa13.71□□□□□ -0.22
NUP98-219ENST00000532475 ARHGAP5Q13017 1502 aa13.7□□□□□ -0.22
NUP98-219ENST00000532475 KDM5CP41229 1560 aa13.7□□□□□ -0.22
NUP98-219ENST00000532475 SCAF1Q9H7N4 1312 aaKnown RBP13.69□□□□□ -0.22
NUP98-219ENST00000532475 MLH3Q9UHC1 1453 aa13.69□□□□□ -0.22
NUP98-219ENST00000532475 KIF14Q15058 1648 aa13.69□□□□□ -0.22
NUP98-219ENST00000532475 DIP2CQ9Y2E4 1556 aa13.69□□□□□ -0.22
NUP98-219ENST00000532475 TROQ12816 1431 aaPredicted RBP13.68□□□□□ -0.22
NUP98-219ENST00000532475 EEA1Q15075 1411 aa13.68□□□□□ -0.22
NUP98-219ENST00000532475 C3P01024 1663 aa13.68□□□□□ -0.22
NUP98-219ENST00000532475 ZMYM3Q14202 1370 aa13.68□□□□□ -0.22
NUP98-219ENST00000532475 IQSEC2Q5JU85 1478 aa13.67□□□□□ -0.22
NUP98-219ENST00000532475 MYO5CQ9NQX4 1742 aa13.66□□□□□ -0.22
NUP98-219ENST00000532475 FMN1Q68DA7 1419 aa13.65□□□□□ -0.22
NUP98-219ENST00000532475 ABCA6Q8N139 1617 aa13.65□□□□□ -0.22
NUP98-219ENST00000532475 ZNF777Q9ULD5 760 aaPredicted RBP13.65□□□□□ -0.22
NUP98-219ENST00000532475 ARHGAP35Q9NRY4 1499 aa13.65□□□□□ -0.22
NUP98-219ENST00000532475 AGLP35573 1532 aa13.64□□□□□ -0.23
NUP98-219ENST00000532475 CAMSAP1Q5T5Y3 1602 aa13.64□□□□□ -0.23
NUP98-219ENST00000532475 HSPA1LP34931 641 aa13.64□□□□□ -0.23
NUP98-219ENST00000532475 REREQ9P2R6 1566 aa13.63□□□□□ -0.23
NUP98-219ENST00000532475 HNRNPMP52272 730 aaKnown RBP eCLIP13.63□□□□□ -0.23
NUP98-219ENST00000532475 PIP4K2BP78356 416 aa13.63□□□□□ -0.23
NUP98-219ENST00000532475 CNTLNQ9NXG0 1405 aa13.63□□□□□ -0.23
NUP98-219ENST00000532475 PKD2Q13563 968 aa13.62□□□□□ -0.23
NUP98-219ENST00000532475 CLIP1P30622 1438 aa13.62□□□□□ -0.23
NUP98-219ENST00000532475 GGT6Q6P531 493 aa13.61□□□□□ -0.23
NUP98-219ENST00000532475 NPATQ14207 1427 aa13.6□□□□□ -0.23
NUP98-219ENST00000532475 CDC42BPBQ9Y5S2 1711 aa13.6□□□□□ -0.23
NUP98-219ENST00000532475 SPAG9O60271 1321 aaKnown RBP13.59□□□□□ -0.23
NUP98-219ENST00000532475 KIDINS220Q9ULH0 1771 aa13.58□□□□□ -0.24
NUP98-219ENST00000532475 PLCB2Q00722 1185 aa13.57□□□□□ -0.24
NUP98-219ENST00000532475 ABCC1P33527 1531 aa13.57□□□□□ -0.24
NUP98-219ENST00000532475 PTPRKQ15262 1439 aa13.56□□□□□ -0.24
NUP98-219ENST00000532475 BCANQ96GW7 911 aa13.56□□□□□ -0.24
NUP98-219ENST00000532475 FBXO31Q5XUX0 539 aaPredicted RBP13.55□□□□□ -0.24
NUP98-219ENST00000532475 TCOF1Q13428 1488 aaKnown RBP13.55□□□□□ -0.24
NUP98-219ENST00000532475 LRRIQ1Q96JM4 1722 aa13.54□□□□□ -0.24
NUP98-219ENST00000532475 TOM1O60784 492 aa13.54□□□□□ -0.24
NUP98-219ENST00000532475 SAMD9LQ8IVG5 1584 aa13.54□□□□□ -0.24
NUP98-219ENST00000532475 PLA2R1Q13018 1463 aa13.53□□□□□ -0.24
NUP98-219ENST00000532475 ITSN2Q9NZM3 1697 aa13.51□□□□□ -0.25
NUP98-219ENST00000532475 PREX2Q70Z35 1606 aa13.51□□□□□ -0.25
NUP98-219ENST00000532475 GPATCH8Q9UKJ3 1502 aaKnown RBP13.51□□□□□ -0.25
NUP98-219ENST00000532475 CFDP1Q9UEE9 299 aaPredicted RBP13.51□□□□□ -0.25
NUP98-219ENST00000532475 ZNF644Q9H582 1327 aaPredicted RBP13.5□□□□□ -0.25
NUP98-219ENST00000532475 SUPT6HQ7KZ85 1726 aaKnown RBP13.5□□□□□ -0.25
NUP98-219ENST00000532475 CEP170BQ9Y4F5 1589 aaPredicted RBP13.49□□□□□ -0.25
NUP98-219ENST00000532475 A2MP01023 1474 aa13.49□□□□□ -0.25
NUP98-219ENST00000532475 CASKIN1Q8WXD9 1431 aa13.49□□□□□ -0.25
NUP98-219ENST00000532475 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 191.2 ms