RNA–Protein interactions for RNA: ENST00000532443.1

PPFIA1-221, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-221ENST00000532443 FAM163AQ96GL9 167 aaPredicted RBP10.62□□□□□ -0.71
PPFIA1-221ENST00000532443 C2orf72A6NCS6 295 aa10.59□□□□□ -0.71
PPFIA1-221ENST00000532443 TMC2Q8TDI7 906 aa10.58□□□□□ -0.72
PPFIA1-221ENST00000532443 CADPS2Q86UW7 1296 aa10.54□□□□□ -0.72
PPFIA1-221ENST00000532443 KIF3CO14782 793 aa10.53□□□□□ -0.72
PPFIA1-221ENST00000532443 SNPHO15079 494 aa10.53□□□□□ -0.72
PPFIA1-221ENST00000532443 POTEMA6NI47 508 aa10.52□□□□□ -0.73
PPFIA1-221ENST00000532443 HOXB3P14651 431 aaPredicted RBP10.51□□□□□ -0.73
PPFIA1-221ENST00000532443 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
PPFIA1-221ENST00000532443 ST18O60284 1047 aa10.5□□□□□ -0.73
PPFIA1-221ENST00000532443 POTEGQ6S5H5 508 aa10.5□□□□□ -0.73
PPFIA1-221ENST00000532443 NCKAP5LQ9HCH0 1330 aa10.5□□□□□ -0.73
PPFIA1-221ENST00000532443 CCDC180Q9P1Z9 1646 aa10.49□□□□□ -0.73
PPFIA1-221ENST00000532443 GPHNQ9NQX3 736 aaPredicted RBP10.49□□□□□ -0.73
PPFIA1-221ENST00000532443 DSG2Q14126 1118 aa10.48□□□□□ -0.73
PPFIA1-221ENST00000532443 ZNF710Q8N1W2 664 aa10.48□□□□□ -0.73
PPFIA1-221ENST00000532443 DOK7Q18PE1 504 aa10.47□□□□□ -0.73
PPFIA1-221ENST00000532443 LARP6Q9BRS8 491 aaKnown RBP10.47□□□□□ -0.73
PPFIA1-221ENST00000532443 CRISPLD2Q9H0B8 497 aa10.47□□□□□ -0.73
PPFIA1-221ENST00000532443 PLSCR2Q9NRY7 297 aa10.47□□□□□ -0.73
PPFIA1-221ENST00000532443 PLPP6Q8IY26 295 aa10.46□□□□□ -0.73
PPFIA1-221ENST00000532443 PDE4AP27815 886 aa10.45□□□□□ -0.74
PPFIA1-221ENST00000532443 MARVELD3Q96A59 401 aa10.45□□□□□ -0.74
PPFIA1-221ENST00000532443 TSHZ2Q9NRE2 1034 aa10.44□□□□□ -0.74
PPFIA1-221ENST00000532443 PCDH10Q9P2E7 1040 aa10.44□□□□□ -0.74
PPFIA1-221ENST00000532443 FOXK1P85037 733 aa10.43□□□□□ -0.74
PPFIA1-221ENST00000532443 PPP1R15BQ5SWA1 713 aa10.43□□□□□ -0.74
PPFIA1-221ENST00000532443 RIMBP2O15034 1052 aa10.42□□□□□ -0.74
PPFIA1-221ENST00000532443 PLCB2Q00722 1185 aa10.42□□□□□ -0.74
PPFIA1-221ENST00000532443 KHSRPQ92945 711 aaKnown RBP eCLIP10.41□□□□□ -0.74
PPFIA1-221ENST00000532443 DDX27Q96GQ7 796 aaKnown RBP10.41□□□□□ -0.74
PPFIA1-221ENST00000532443 ARSIQ5FYB1 569 aa10.39□□□□□ -0.75
PPFIA1-221ENST00000532443 EMP3P54852 163 aa10.38□□□□□ -0.75
PPFIA1-221ENST00000532443 UPF1Q92900 1129 aaKnown RBP eCLIP10.38□□□□□ -0.75
PPFIA1-221ENST00000532443 HOXB1P14653 301 aaPredicted RBP10.36□□□□□ -0.75
PPFIA1-221ENST00000532443 MFSD10Q14728 455 aa10.36□□□□□ -0.75
PPFIA1-221ENST00000532443 HAP1P54257 671 aaPredicted RBP10.35□□□□□ -0.75
PPFIA1-221ENST00000532443 GPR153Q6NV75 609 aa10.35□□□□□ -0.75
PPFIA1-221ENST00000532443 PCDHGA4Q9Y5G9 962 aa10.35□□□□□ -0.75
PPFIA1-221ENST00000532443 NUDT7P0C024 238 aa10.34□□□□□ -0.75
PPFIA1-221ENST00000532443 FAM205CA6NFA0 338 aa10.33□□□□□ -0.76
PPFIA1-221ENST00000532443 ZSWIM6Q9HCJ5 1215 aa10.33□□□□□ -0.76
PPFIA1-221ENST00000532443 SLC34A2O95436 690 aa10.32□□□□□ -0.76
PPFIA1-221ENST00000532443 ERBB3P21860 1342 aa10.3□□□□□ -0.76
PPFIA1-221ENST00000532443 PTCD2Q8WV60 388 aaKnown RBP10.29□□□□□ -0.76
PPFIA1-221ENST00000532443 EMILIN3Q9NT22 766 aa10.29□□□□□ -0.76
PPFIA1-221ENST00000532443 WDR70Q9NW82 654 aa10.29□□□□□ -0.76
PPFIA1-221ENST00000532443 OXER1Q8TDS5 423 aa10.28□□□□□ -0.76
PPFIA1-221ENST00000532443 HS3ST6Q96QI5 342 aa10.28□□□□□ -0.76
PPFIA1-221ENST00000532443 POTEB3A0JP26 581 aa10.27□□□□□ -0.77
PPFIA1-221ENST00000532443 POTEBQ6S5H4 581 aa10.27□□□□□ -0.77
PPFIA1-221ENST00000532443 TBC1D12O60347 775 aa10.26□□□□□ -0.77
PPFIA1-221ENST00000532443 VARS2Q5ST30 1063 aaKnown RBP10.26□□□□□ -0.77
PPFIA1-221ENST00000532443 MAP3K9P80192 1104 aa10.24□□□□□ -0.77
PPFIA1-221ENST00000532443 LHX6Q9UPM6 363 aa10.24□□□□□ -0.77
PPFIA1-221ENST00000532443 ZNF316A6NFI3 1004 aaPredicted RBP10.23□□□□□ -0.77
PPFIA1-221ENST00000532443 DPYSL4O14531 572 aa10.23□□□□□ -0.77
PPFIA1-221ENST00000532443 CAMK2BQ13554 666 aa10.22□□□□□ -0.77
PPFIA1-221ENST00000532443 E2F4Q16254 413 aa10.22□□□□□ -0.77
PPFIA1-221ENST00000532443 CDAN1Q8IWY9 1227 aa10.22□□□□□ -0.77
PPFIA1-221ENST00000532443 EVI5O60447 810 aa10.2□□□□□ -0.78
PPFIA1-221ENST00000532443 KDM4FA0A1W2PPD8 638 aa10.18□□□□□ -0.78
PPFIA1-221ENST00000532443 KDM2AQ9Y2K7 1162 aa10.15□□□□□ -0.78
PPFIA1-221ENST00000532443 ZNF454Q8N9F8 522 aa10.14□□□□□ -0.79
PPFIA1-221ENST00000532443 KCNV2Q8TDN2 545 aa10.14□□□□□ -0.79
PPFIA1-221ENST00000532443 ZNF687Q8N1G0 1237 aa10.11□□□□□ -0.79
PPFIA1-221ENST00000532443 KRTAP3-3Q9BYR6 98 aa10.1□□□□□ -0.79
PPFIA1-221ENST00000532443 KRTAP3-2Q9BYR7 98 aa10.1□□□□□ -0.79
PPFIA1-221ENST00000532443 AXIN2Q9Y2T1 843 aa10.1□□□□□ -0.79
PPFIA1-221ENST00000532443 PPP4R3BQ5MIZ7 849 aa10.09□□□□□ -0.79
PPFIA1-221ENST00000532443 DDX12PQ92771 950 aa10.09□□□□□ -0.79
PPFIA1-221ENST00000532443 ANO8Q9HCE9 1232 aaPredicted RBP10.09□□□□□ -0.79
PPFIA1-221ENST00000532443 ZCCHC6Q5VYS8 1495 aaKnown RBP10.09□□□□□ -0.79
PPFIA1-221ENST00000532443 PSDA5PKW4 1024 aaPredicted RBP10.08□□□□□ -0.8
PPFIA1-221ENST00000532443 FOSBP53539 338 aa10.07□□□□□ -0.8
PPFIA1-221ENST00000532443 PDIA6Q15084 440 aa10.07□□□□□ -0.8
PPFIA1-221ENST00000532443 POTEEQ6S8J3 1075 aa10.06□□□□□ -0.8
PPFIA1-221ENST00000532443 JPH4Q96JJ6 628 aa10.06□□□□□ -0.8
PPFIA1-221ENST00000532443 VSIG10Q8N0Z9 540 aa10.05□□□□□ -0.8
PPFIA1-221ENST00000532443 PSEN2P49810 448 aa10.04□□□□□ -0.8
PPFIA1-221ENST00000532443 KCNK17Q96T54 332 aa10.04□□□□□ -0.8
PPFIA1-221ENST00000532443 PCDHGA10Q9Y5H3 936 aa10.04□□□□□ -0.8
PPFIA1-221ENST00000532443 GRXCR2A6NFK2 248 aa10.03□□□□□ -0.8
PPFIA1-221ENST00000532443 SPDYE16A6NNV3 312 aaPredicted RBP10.03□□□□□ -0.8
PPFIA1-221ENST00000532443 ANKRD13DQ6ZTN6 518 aa10.03□□□□□ -0.8
PPFIA1-221ENST00000532443 P3H3Q8IVL6 736 aa10.03□□□□□ -0.8
PPFIA1-221ENST00000532443 ARHGEF1Q92888 912 aaKnown RBP10.03□□□□□ -0.8
PPFIA1-221ENST00000532443 RBM33Q96EV2 1170 aaKnown RBP10.03□□□□□ -0.8
PPFIA1-221ENST00000532443 ADAM33Q9BZ11 813 aa10.03□□□□□ -0.8
PPFIA1-221ENST00000532443 ARIH1Q9Y4X5 557 aaPredicted RBP10.03□□□□□ -0.8
PPFIA1-221ENST00000532443 ZDHHC16Q969W1 377 aa10.02□□□□□ -0.81
PPFIA1-221ENST00000532443 NBR1Q14596 966 aa10.01□□□□□ -0.81
PPFIA1-221ENST00000532443 ARHGAP33O14559 1287 aa10□□□□□ -0.81
PPFIA1-221ENST00000532443 PHF14O94880 888 aa10□□□□□ -0.81
PPFIA1-221ENST00000532443 PBX2P40425 430 aa10□□□□□ -0.81
PPFIA1-221ENST00000532443 TYW1BQ6NUM6 668 aa10□□□□□ -0.81
PPFIA1-221ENST00000532443 LSM11P83369 360 aaKnown RBP eCLIP9.99□□□□□ -0.81
PPFIA1-221ENST00000532443 DMRTA1Q5VZB9 504 aa9.99□□□□□ -0.81
PPFIA1-221ENST00000532443 DCAF1Q9Y4B6 1507 aa9.98□□□□□ -0.81
PPFIA1-221ENST00000532443 MLLT3P42568 568 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms