RNA–Protein interactions for RNA: ENST00000532392.1

CTSB-224, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-224ENST00000532392 EHBP1L1Q8N3D4 1523 aa22.95■■□□□ 1.26
CTSB-224ENST00000532392 CDC42BPBQ9Y5S2 1711 aa22.94■■□□□ 1.26
CTSB-224ENST00000532392 PREX2Q70Z35 1606 aa22.94■■□□□ 1.26
CTSB-224ENST00000532392 RICTORQ6R327 1708 aa22.94■■□□□ 1.26
CTSB-224ENST00000532392 GPATCH8Q9UKJ3 1502 aaKnown RBP22.93■■□□□ 1.26
CTSB-224ENST00000532392 CCNB3Q8WWL7 1395 aa22.93■■□□□ 1.26
CTSB-224ENST00000532392 KDM4FA0A1W2PPD8 638 aa22.93■■□□□ 1.26
CTSB-224ENST00000532392 TIAM1Q13009 1591 aa22.93■■□□□ 1.26
CTSB-224ENST00000532392 POGZQ7Z3K3 1410 aa22.91■■□□□ 1.26
CTSB-224ENST00000532392 CDC42BPAQ5VT25 1732 aa22.91■■□□□ 1.26
CTSB-224ENST00000532392 MAP3K1Q13233 1512 aa22.89■■□□□ 1.26
CTSB-224ENST00000532392 CFDP1Q9UEE9 299 aaPredicted RBP22.89■■□□□ 1.25
CTSB-224ENST00000532392 ZNF777Q9ULD5 760 aaPredicted RBP22.88■■□□□ 1.25
CTSB-224ENST00000532392 ZMYM4Q5VZL5 1548 aa22.87■■□□□ 1.25
CTSB-224ENST00000532392 LRRC9Q6ZRR7 1453 aa22.86■■□□□ 1.25
CTSB-224ENST00000532392 MAGI2Q86UL8 1455 aa22.86■■□□□ 1.25
CTSB-224ENST00000532392 AFAP1Q8N556 730 aa22.86■■□□□ 1.25
CTSB-224ENST00000532392 ZNF518AQ6AHZ1 1483 aa22.85■■□□□ 1.25
CTSB-224ENST00000532392 APLP2Q06481 763 aa22.85■■□□□ 1.25
CTSB-224ENST00000532392 KANK4Q5T7N3 995 aaPredicted RBP22.84■■□□□ 1.25
CTSB-224ENST00000532392 ABCC1P33527 1531 aa22.83■■□□□ 1.25
CTSB-224ENST00000532392 ARHGEF12Q9NZN5 1544 aa22.83■■□□□ 1.25
CTSB-224ENST00000532392 NCOA2Q15596 1464 aa22.83■■□□□ 1.25
CTSB-224ENST00000532392 SUPT6HQ7KZ85 1726 aaKnown RBP22.82■■□□□ 1.24
CTSB-224ENST00000532392 ZFYVE16Q7Z3T8 1539 aa22.82■■□□□ 1.24
CTSB-224ENST00000532392 ARHGEF40Q8TER5 1519 aa22.82■■□□□ 1.24
CTSB-224ENST00000532392 YEATS2Q9ULM3 1422 aa22.82■■□□□ 1.24
CTSB-224ENST00000532392 TRAPPC8Q9Y2L5 1435 aa22.81■■□□□ 1.24
CTSB-224ENST00000532392 SAMD9LQ8IVG5 1584 aa22.8■■□□□ 1.24
CTSB-224ENST00000532392 HNRNPMP52272 730 aaKnown RBP eCLIP22.79■■□□□ 1.24
CTSB-224ENST00000532392 KIAA1107Q9UPP5 1409 aa22.79■■□□□ 1.24
CTSB-224ENST00000532392 KDM5CP41229 1560 aa22.79■■□□□ 1.24
CTSB-224ENST00000532392 PLEKHH2Q8IVE3 1493 aa22.79■■□□□ 1.24
CTSB-224ENST00000532392 MYT1LQ9UL68 1186 aa22.78■■□□□ 1.24
CTSB-224ENST00000532392 ARID4BQ4LE39 1312 aaPredicted RBP22.78■■□□□ 1.24
CTSB-224ENST00000532392 ITSN2Q9NZM3 1697 aa22.77■■□□□ 1.24
CTSB-224ENST00000532392 ZNF644Q9H582 1327 aaPredicted RBP22.76■■□□□ 1.23
CTSB-224ENST00000532392 MLH3Q9UHC1 1453 aa22.75■■□□□ 1.23
CTSB-224ENST00000532392 SYCP2Q9BX26 1530 aa22.75■■□□□ 1.23
CTSB-224ENST00000532392 ATP10AO60312 1499 aa22.74■■□□□ 1.23
CTSB-224ENST00000532392 HECW2Q9P2P5 1572 aa22.72■■□□□ 1.23
CTSB-224ENST00000532392 C9orf84Q5VXU9 1444 aa22.7■■□□□ 1.22
CTSB-224ENST00000532392 SPAG9O60271 1321 aaKnown RBP22.69■■□□□ 1.22
CTSB-224ENST00000532392 MBD5Q9P267 1494 aa22.67■■□□□ 1.22
CTSB-224ENST00000532392 BCORL1Q5H9F3 1711 aa22.65■■□□□ 1.22
CTSB-224ENST00000532392 DIP2CQ9Y2E4 1556 aa22.65■■□□□ 1.22
CTSB-224ENST00000532392 CAMSAP2Q08AD1 1489 aa22.65■■□□□ 1.22
CTSB-224ENST00000532392 MYOM3Q5VTT5 1437 aa22.65■■□□□ 1.22
CTSB-224ENST00000532392 RSPH4AQ5TD94 716 aa22.64■■□□□ 1.21
CTSB-224ENST00000532392 ADAMTSL3P82987 1691 aa22.64■■□□□ 1.21
CTSB-224ENST00000532392 KIDINS220Q9ULH0 1771 aa22.63■■□□□ 1.21
CTSB-224ENST00000532392 SIGLEC1Q9BZZ2 1709 aa22.63■■□□□ 1.21
CTSB-224ENST00000532392 ABCA6Q8N139 1617 aa22.63■■□□□ 1.21
CTSB-224ENST00000532392 MIA2Q96PC5 1412 aa22.63■■□□□ 1.21
CTSB-224ENST00000532392 MLECQ14165 292 aa22.62■■□□□ 1.21
CTSB-224ENST00000532392 REREQ9P2R6 1566 aa22.6■■□□□ 1.21
CTSB-224ENST00000532392 ATP7AQ04656 1500 aa22.59■■□□□ 1.21
CTSB-224ENST00000532392 CCDC141Q6ZP82 1450 aa22.58■■□□□ 1.2
CTSB-224ENST00000532392 RTEL1-TNFRSF6BF6WH68 1400 aa22.57■■□□□ 1.2
CTSB-224ENST00000532392 INO80Q9ULG1 1556 aaPredicted RBP22.57■■□□□ 1.2
CTSB-224ENST00000532392 PTPRMP28827 1452 aa22.56■■□□□ 1.2
CTSB-224ENST00000532392 MADDQ8WXG6 1647 aa22.56■■□□□ 1.2
CTSB-224ENST00000532392 AGLP35573 1532 aa22.56■■□□□ 1.2
CTSB-224ENST00000532392 TSPY4P0CV99 314 aa22.55■■□□□ 1.2
CTSB-224ENST00000532392 TSPY10P0CW01 314 aa22.55■■□□□ 1.2
CTSB-224ENST00000532392 ARHGEF5Q12774 1597 aa22.55■■□□□ 1.2
CTSB-224ENST00000532392 A2MP01023 1474 aa22.52■■□□□ 1.2
CTSB-224ENST00000532392 FGD6Q6ZV73 1430 aa22.51■■□□□ 1.19
CTSB-224ENST00000532392 RIMS1Q86UR5 1692 aaKnown RBP22.49■■□□□ 1.19
CTSB-224ENST00000532392 PTPN23Q9H3S7 1636 aa22.48■■□□□ 1.19
CTSB-224ENST00000532392 DHX29Q7Z478 1369 aaKnown RBP22.46■■□□□ 1.19
CTSB-224ENST00000532392 TCOF1Q13428 1488 aaKnown RBP22.46■■□□□ 1.19
CTSB-224ENST00000532392 PLXNC1O60486 1568 aa22.46■■□□□ 1.19
CTSB-224ENST00000532392 ADGBQ8N7X0 1667 aa22.46■■□□□ 1.19
CTSB-224ENST00000532392 FER1L4A9Z1Z3 1794 aa22.45■■□□□ 1.19
CTSB-224ENST00000532392 ESF1Q9H501 851 aaKnown RBP22.43■■□□□ 1.18
CTSB-224ENST00000532392 MAST1Q9Y2H9 1570 aa22.42■■□□□ 1.18
CTSB-224ENST00000532392 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
CTSB-224ENST00000532392 PPARGC1BQ86YN6 1023 aaKnown RBP22.42■■□□□ 1.18
CTSB-224ENST00000532392 ABCC5O15440 1437 aa22.41■■□□□ 1.18
CTSB-224ENST00000532392 GGT6Q6P531 493 aa22.4■■□□□ 1.18
CTSB-224ENST00000532392 FAM50AQ14320 339 aaKnown RBP22.39■■□□□ 1.17
CTSB-224ENST00000532392 DAPK1P53355 1430 aa22.39■■□□□ 1.17
CTSB-224ENST00000532392 KIF3BO15066 747 aa22.38■■□□□ 1.17
CTSB-224ENST00000532392 CEBPAP49715 358 aaPredicted RBP22.38■■□□□ 1.17
CTSB-224ENST00000532392 PPP6R1Q9UPN7 881 aa22.38■■□□□ 1.17
CTSB-224ENST00000532392 CNTLNQ9NXG0 1405 aa22.37■■□□□ 1.17
CTSB-224ENST00000532392 SHANK2Q9UPX8 1470 aa22.36■■□□□ 1.17
CTSB-224ENST00000532392 DNMT1P26358 1616 aaKnown RBP22.35■■□□□ 1.17
CTSB-224ENST00000532392 RRP7BPQ9NSQ0 103 aa22.32■■□□□ 1.16
CTSB-224ENST00000532392 CHIC2Q9UKJ5 165 aa22.32■■□□□ 1.16
CTSB-224ENST00000532392 CROCC2H7BZ55 1655 aa22.32■■□□□ 1.16
CTSB-224ENST00000532392 ZMYM3Q14202 1370 aa22.3■■□□□ 1.16
CTSB-224ENST00000532392 KIF15Q9NS87 1388 aa22.3■■□□□ 1.16
CTSB-224ENST00000532392 ANKRD30AQ9BXX3 1397 aa22.29■■□□□ 1.16
CTSB-224ENST00000532392 DUOX2Q9NRD8 1548 aa22.29■■□□□ 1.16
CTSB-224ENST00000532392 C3P01024 1663 aa22.26■■□□□ 1.15
CTSB-224ENST00000532392 LMTK3Q96Q04 1460 aa22.26■■□□□ 1.15
CTSB-224ENST00000532392 MROH2AA6NES4 1674 aa22.26■■□□□ 1.15
CTSB-224ENST00000532392 NCOA1Q15788 1441 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms