RNA–Protein interactions for RNA: ENST00000532278.1

SLC43A3-220, Transcript of solute carrier family 43 member 3, humanhuman

TSL 4

Gene SLC43A3, Length 506 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-220ENST00000532278 SCAPERQ9BY12 1400 aa37.78■■■■□ 3.64
SLC43A3-220ENST00000532278 CDC42BPBQ9Y5S2 1711 aa37.78■■■■□ 3.64
SLC43A3-220ENST00000532278 PREX2Q70Z35 1606 aa37.77■■■■□ 3.64
SLC43A3-220ENST00000532278 POGZQ7Z3K3 1410 aa37.77■■■■□ 3.64
SLC43A3-220ENST00000532278 ARHGEF40Q8TER5 1519 aa37.75■■■■□ 3.63
SLC43A3-220ENST00000532278 MAGI2Q86UL8 1455 aa37.73■■■■□ 3.63
SLC43A3-220ENST00000532278 CDC42BPAQ5VT25 1732 aa37.71■■■■□ 3.63
SLC43A3-220ENST00000532278 MTUS2Q5JR59 1369 aa37.68■■■■□ 3.62
SLC43A3-220ENST00000532278 VPS8Q8N3P4 1428 aa37.66■■■■□ 3.62
SLC43A3-220ENST00000532278 ZFYVE16Q7Z3T8 1539 aa37.65■■■■□ 3.62
SLC43A3-220ENST00000532278 EHBP1L1Q8N3D4 1523 aa37.64■■■■□ 3.62
SLC43A3-220ENST00000532278 ZNF518AQ6AHZ1 1483 aa37.64■■■■□ 3.62
SLC43A3-220ENST00000532278 GPATCH8Q9UKJ3 1502 aaKnown RBP37.61■■■■□ 3.61
SLC43A3-220ENST00000532278 KDM5CP41229 1560 aa37.6■■■■□ 3.61
SLC43A3-220ENST00000532278 ABCC1P33527 1531 aa37.6■■■■□ 3.61
SLC43A3-220ENST00000532278 YEATS2Q9ULM3 1422 aa37.58■■■■□ 3.61
SLC43A3-220ENST00000532278 ADAMTSL3P82987 1691 aa37.54■■■■□ 3.6
SLC43A3-220ENST00000532278 CCNB3Q8WWL7 1395 aa37.54■■■■□ 3.6
SLC43A3-220ENST00000532278 ITSN2Q9NZM3 1697 aa37.53■■■■□ 3.6
SLC43A3-220ENST00000532278 TIAM1Q13009 1591 aa37.53■■■■□ 3.6
SLC43A3-220ENST00000532278 BCORL1Q5H9F3 1711 aa37.53■■■■□ 3.6
SLC43A3-220ENST00000532278 ARHGEF12Q9NZN5 1544 aa37.52■■■■□ 3.6
SLC43A3-220ENST00000532278 AFAP1Q8N556 730 aa37.5■■■■□ 3.59
SLC43A3-220ENST00000532278 SAMD9LQ8IVG5 1584 aa37.49■■■■□ 3.59
SLC43A3-220ENST00000532278 HECW2Q9P2P5 1572 aa37.47■■■■□ 3.59
SLC43A3-220ENST00000532278 ATP10AO60312 1499 aa37.47■■■■□ 3.59
SLC43A3-220ENST00000532278 ARID4BQ4LE39 1312 aaPredicted RBP37.47■■■■□ 3.59
SLC43A3-220ENST00000532278 MLH3Q9UHC1 1453 aa37.46■■■■□ 3.59
SLC43A3-220ENST00000532278 TRAPPC8Q9Y2L5 1435 aa37.46■■■■□ 3.59
SLC43A3-220ENST00000532278 MAP3K1Q13233 1512 aa37.46■■■■□ 3.59
SLC43A3-220ENST00000532278 CFDP1Q9UEE9 299 aaPredicted RBP37.45■■■■□ 3.59
SLC43A3-220ENST00000532278 PLEKHH2Q8IVE3 1493 aa37.44■■■■□ 3.58
SLC43A3-220ENST00000532278 KIAA1107Q9UPP5 1409 aa37.44■■■■□ 3.58
SLC43A3-220ENST00000532278 SUPT6HQ7KZ85 1726 aaKnown RBP37.43■■■■□ 3.58
SLC43A3-220ENST00000532278 SIGLEC1Q9BZZ2 1709 aa37.43■■■■□ 3.58
SLC43A3-220ENST00000532278 C9orf84Q5VXU9 1444 aa37.43■■■■□ 3.58
SLC43A3-220ENST00000532278 ZNF777Q9ULD5 760 aaPredicted RBP37.4■■■■□ 3.58
SLC43A3-220ENST00000532278 SYCP2Q9BX26 1530 aa37.39■■■■□ 3.58
SLC43A3-220ENST00000532278 NCOA2Q15596 1464 aa37.38■■■■□ 3.57
SLC43A3-220ENST00000532278 LRRC9Q6ZRR7 1453 aa37.38■■■■□ 3.57
SLC43A3-220ENST00000532278 DIP2CQ9Y2E4 1556 aa37.36■■■■□ 3.57
SLC43A3-220ENST00000532278 REREQ9P2R6 1566 aa37.35■■■■□ 3.57
SLC43A3-220ENST00000532278 MADDQ8WXG6 1647 aa37.35■■■■□ 3.57
SLC43A3-220ENST00000532278 PTPRMP28827 1452 aa37.33■■■■□ 3.57
SLC43A3-220ENST00000532278 ABCA6Q8N139 1617 aa37.32■■■■□ 3.57
SLC43A3-220ENST00000532278 KIDINS220Q9ULH0 1771 aa37.32■■■■□ 3.56
SLC43A3-220ENST00000532278 HNRNPMP52272 730 aaKnown RBP eCLIP37.29■■■■□ 3.56
SLC43A3-220ENST00000532278 MYT1LQ9UL68 1186 aa37.28■■■■□ 3.56
SLC43A3-220ENST00000532278 RIMS1Q86UR5 1692 aaKnown RBP37.22■■■■□ 3.55
SLC43A3-220ENST00000532278 MBD5Q9P267 1494 aa37.22■■■■□ 3.55
SLC43A3-220ENST00000532278 SPAG9O60271 1321 aaKnown RBP37.22■■■■□ 3.55
SLC43A3-220ENST00000532278 AGLP35573 1532 aa37.21■■■■□ 3.55
SLC43A3-220ENST00000532278 ZNF644Q9H582 1327 aaPredicted RBP37.21■■■■□ 3.55
SLC43A3-220ENST00000532278 KANK4Q5T7N3 995 aaPredicted RBP37.21■■■■□ 3.55
SLC43A3-220ENST00000532278 INO80Q9ULG1 1556 aaPredicted RBP37.19■■■■□ 3.54
SLC43A3-220ENST00000532278 ATP7AQ04656 1500 aa37.18■■■■□ 3.54
SLC43A3-220ENST00000532278 FER1L4A9Z1Z3 1794 aa37.18■■■■□ 3.54
SLC43A3-220ENST00000532278 MLECQ14165 292 aa37.15■■■■□ 3.54
SLC43A3-220ENST00000532278 CAMSAP2Q08AD1 1489 aa37.14■■■■□ 3.54
SLC43A3-220ENST00000532278 APLP2Q06481 763 aa37.13■■■■□ 3.53
SLC43A3-220ENST00000532278 RSPH4AQ5TD94 716 aa37.1■■■■□ 3.53
SLC43A3-220ENST00000532278 RTEL1-TNFRSF6BF6WH68 1400 aa37.09■■■■□ 3.53
SLC43A3-220ENST00000532278 CCDC141Q6ZP82 1450 aa37.07■■■■□ 3.52
SLC43A3-220ENST00000532278 MIA2Q96PC5 1412 aa37.06■■■■□ 3.52
SLC43A3-220ENST00000532278 MYOM3Q5VTT5 1437 aa37.05■■■■□ 3.52
SLC43A3-220ENST00000532278 PLXNC1O60486 1568 aa37.04■■■■□ 3.52
SLC43A3-220ENST00000532278 ARHGEF5Q12774 1597 aa37.04■■■■□ 3.52
SLC43A3-220ENST00000532278 ADGBQ8N7X0 1667 aa37.02■■■■□ 3.52
SLC43A3-220ENST00000532278 A2MP01023 1474 aa37.01■■■■□ 3.52
SLC43A3-220ENST00000532278 CNTLNQ9NXG0 1405 aa36.91■■■■□ 3.5
SLC43A3-220ENST00000532278 LMTK3Q96Q04 1460 aa36.9■■■■□ 3.5
SLC43A3-220ENST00000532278 DHX29Q7Z478 1369 aaKnown RBP36.88■■■■□ 3.49
SLC43A3-220ENST00000532278 TSPY4P0CV99 314 aa36.87■■■■□ 3.49
SLC43A3-220ENST00000532278 TSPY10P0CW01 314 aa36.87■■■■□ 3.49
SLC43A3-220ENST00000532278 MAST1Q9Y2H9 1570 aa36.87■■■■□ 3.49
SLC43A3-220ENST00000532278 ESF1Q9H501 851 aaKnown RBP36.85■■■■□ 3.49
SLC43A3-220ENST00000532278 PLPPR3Q6T4P5 718 aa36.83■■■■□ 3.49
SLC43A3-220ENST00000532278 SETD1BQ9UPS6 1966 aaKnown RBP36.83■■■■□ 3.49
SLC43A3-220ENST00000532278 MROH2AA6NES4 1674 aa36.82■■■■□ 3.48
SLC43A3-220ENST00000532278 C3P01024 1663 aa36.82■■■■□ 3.48
SLC43A3-220ENST00000532278 PTPN23Q9H3S7 1636 aa36.81■■■■□ 3.48
SLC43A3-220ENST00000532278 CEBPAP49715 358 aaPredicted RBP36.81■■■■□ 3.48
SLC43A3-220ENST00000532278 PPP6R1Q9UPN7 881 aa36.8■■■■□ 3.48
SLC43A3-220ENST00000532278 FGD6Q6ZV73 1430 aa36.79■■■■□ 3.48
SLC43A3-220ENST00000532278 TCOF1Q13428 1488 aaKnown RBP36.77■■■■□ 3.48
SLC43A3-220ENST00000532278 PREX1Q8TCU6 1659 aa36.77■■■■□ 3.48
SLC43A3-220ENST00000532278 GGT6Q6P531 493 aa36.72■■■■□ 3.47
SLC43A3-220ENST00000532278 SHANK2Q9UPX8 1470 aa36.71■■■■□ 3.47
SLC43A3-220ENST00000532278 CLTCQ00610 1675 aaKnown RBP36.7■■■■□ 3.47
SLC43A3-220ENST00000532278 ZMYM3Q14202 1370 aa36.69■■■■□ 3.46
SLC43A3-220ENST00000532278 CROCC2H7BZ55 1655 aa36.69■■■■□ 3.46
SLC43A3-220ENST00000532278 ABCC5O15440 1437 aa36.68■■■■□ 3.46
SLC43A3-220ENST00000532278 FAM135AQ9P2D6 1515 aa36.68■■■■□ 3.46
SLC43A3-220ENST00000532278 NPATQ14207 1427 aa36.67■■■■□ 3.46
SLC43A3-220ENST00000532278 DNMT1P26358 1616 aaKnown RBP36.67■■■■□ 3.46
SLC43A3-220ENST00000532278 KIF3BO15066 747 aa36.66■■■■□ 3.46
SLC43A3-220ENST00000532278 UHRF1BP1Q6BDS2 1440 aa36.64■■■■□ 3.46
SLC43A3-220ENST00000532278 DAPK1P53355 1430 aa36.63■■■■□ 3.45
SLC43A3-220ENST00000532278 EIF2AK4Q9P2K8 1649 aaKnown RBP36.61■■■■□ 3.45
SLC43A3-220ENST00000532278 HSPA2P54652 639 aa36.6■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms