RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 SENP3-EIF4A1A0A087X0R7 540 aa10.66□□□□□ -0.7
CTNND1-230ENST00000532245 MPHOSPH9Q99550 1183 aa10.66□□□□□ -0.7
CTNND1-230ENST00000532245 PRDM2Q13029 1718 aa10.64□□□□□ -0.71
CTNND1-230ENST00000532245 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
CTNND1-230ENST00000532245 TMF1P82094 1093 aa10.62□□□□□ -0.71
CTNND1-230ENST00000532245 CC2D1BQ5T0F9 858 aaKnown RBP10.62□□□□□ -0.71
CTNND1-230ENST00000532245 LAMC3Q9Y6N6 1575 aa10.62□□□□□ -0.71
CTNND1-230ENST00000532245 NEUROD2Q15784 382 aa10.61□□□□□ -0.71
CTNND1-230ENST00000532245 CUX1P39880 1505 aa10.61□□□□□ -0.71
CTNND1-230ENST00000532245 SYNJ1O43426 1573 aa10.6□□□□□ -0.71
CTNND1-230ENST00000532245 CCDC9Q9Y3X0 531 aaKnown RBP10.6□□□□□ -0.71
CTNND1-230ENST00000532245 U2SURPO15042 1029 aaKnown RBP10.59□□□□□ -0.71
CTNND1-230ENST00000532245 DNMBPQ6XZF7 1577 aa10.59□□□□□ -0.71
CTNND1-230ENST00000532245 ZNF644Q9H582 1327 aaPredicted RBP10.59□□□□□ -0.71
CTNND1-230ENST00000532245 LAS1LQ9Y4W2 734 aaKnown RBP10.59□□□□□ -0.71
CTNND1-230ENST00000532245 RAB3GAP2Q9H2M9 1393 aa10.59□□□□□ -0.71
CTNND1-230ENST00000532245 NUDCQ9Y266 331 aa10.58□□□□□ -0.72
CTNND1-230ENST00000532245 AFAP1Q8N556 730 aa10.57□□□□□ -0.72
CTNND1-230ENST00000532245 CSB-PGBD3P0DP91 1061 aa10.57□□□□□ -0.72
CTNND1-230ENST00000532245 MAPK8IP3Q9UPT6 1336 aa10.57□□□□□ -0.72
CTNND1-230ENST00000532245 NPHP1O15259 732 aa10.57□□□□□ -0.72
CTNND1-230ENST00000532245 HDGFL2Q7Z4V5 671 aaPredicted RBP10.56□□□□□ -0.72
CTNND1-230ENST00000532245 SYNJ2O15056 1496 aa10.56□□□□□ -0.72
CTNND1-230ENST00000532245 ROCK2O75116 1388 aaKnown RBP10.56□□□□□ -0.72
CTNND1-230ENST00000532245 UNC13AQ9UPW8 1703 aa10.55□□□□□ -0.72
CTNND1-230ENST00000532245 NGDNQ8NEJ9 315 aaKnown RBP10.55□□□□□ -0.72
CTNND1-230ENST00000532245 MORC1Q86VD1 984 aa10.54□□□□□ -0.72
CTNND1-230ENST00000532245 TRAK1Q9UPV9 953 aa10.54□□□□□ -0.72
CTNND1-230ENST00000532245 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-230ENST00000532245 ARHGAP5Q13017 1502 aa10.52□□□□□ -0.72
CTNND1-230ENST00000532245 GTF3C3Q9Y5Q9 886 aa10.52□□□□□ -0.73
CTNND1-230ENST00000532245 RAPGEF3O95398 923 aa10.52□□□□□ -0.73
CTNND1-230ENST00000532245 TOP2BQ02880 1626 aa10.52□□□□□ -0.73
CTNND1-230ENST00000532245 HSPA5P11021 654 aaKnown RBP10.5□□□□□ -0.73
CTNND1-230ENST00000532245 MIER1Q8N108 512 aa10.5□□□□□ -0.73
CTNND1-230ENST00000532245 VGFO15240 615 aaPredicted RBP10.5□□□□□ -0.73
CTNND1-230ENST00000532245 CCDC144AA2RUR9 1427 aa10.5□□□□□ -0.73
CTNND1-230ENST00000532245 URB2Q14146 1524 aaKnown RBP10.49□□□□□ -0.73
CTNND1-230ENST00000532245 ZNF608Q9ULD9 1512 aaPredicted RBP10.49□□□□□ -0.73
CTNND1-230ENST00000532245 L3MBTL2Q969R5 705 aa10.49□□□□□ -0.73
CTNND1-230ENST00000532245 MYH16Q9H6N6 1097 aa10.48□□□□□ -0.73
CTNND1-230ENST00000532245 MYOM3Q5VTT5 1437 aa10.48□□□□□ -0.73
CTNND1-230ENST00000532245 KIF15Q9NS87 1388 aa10.48□□□□□ -0.73
CTNND1-230ENST00000532245 FKBP8Q14318 412 aa10.48□□□□□ -0.73
CTNND1-230ENST00000532245 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.47□□□□□ -0.732e-8■□□□□ 11.3
CTNND1-230ENST00000532245 EIF3AQ14152 1382 aaKnown RBP10.47□□□□□ -0.73
CTNND1-230ENST00000532245 ABCA10Q8WWZ4 1543 aa10.46□□□□□ -0.73
CTNND1-230ENST00000532245 CASKIN1Q8WXD9 1431 aa10.46□□□□□ -0.74
CTNND1-230ENST00000532245 TIMELESSQ9UNS1 1208 aa10.46□□□□□ -0.74
CTNND1-230ENST00000532245 KIAA0586Q9BVV6 1533 aa10.46□□□□□ -0.74
CTNND1-230ENST00000532245 LTV1Q96GA3 475 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-230ENST00000532245 UACAQ9BZF9 1416 aa10.45□□□□□ -0.74
CTNND1-230ENST00000532245 TERF2IPQ9NYB0 399 aa10.45□□□□□ -0.74
CTNND1-230ENST00000532245 SCAPERQ9BY12 1400 aa10.45□□□□□ -0.74
CTNND1-230ENST00000532245 MINK1Q8N4C8 1332 aaPredicted RBP10.44□□□□□ -0.74
CTNND1-230ENST00000532245 IRX6P78412 446 aaPredicted RBP10.44□□□□□ -0.74
CTNND1-230ENST00000532245 PNNQ9H307 717 aaKnown RBP10.44□□□□□ -0.74
CTNND1-230ENST00000532245 KIF21BO75037 1637 aa10.44□□□□□ -0.74
CTNND1-230ENST00000532245 MEX3CQ5U5Q3 659 aaKnown RBP10.44□□□□□ -0.74
CTNND1-230ENST00000532245 RTF1Q92541 710 aaKnown RBP10.44□□□□□ -0.74
CTNND1-230ENST00000532245 ZNF330Q9Y3S2 320 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-230ENST00000532245 MAGI1Q96QZ7 1491 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-230ENST00000532245 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.43□□□□□ -0.74
CTNND1-230ENST00000532245 GRIN2AQ12879 1464 aa10.43□□□□□ -0.74
CTNND1-230ENST00000532245 NCOA2Q15596 1464 aa10.43□□□□□ -0.74
CTNND1-230ENST00000532245 FGD6Q6ZV73 1430 aa10.42□□□□□ -0.74
CTNND1-230ENST00000532245 AMPHP49418 695 aa10.42□□□□□ -0.74
CTNND1-230ENST00000532245 PHLDB1Q86UU1 1377 aa10.42□□□□□ -0.74
CTNND1-230ENST00000532245 ERICH3Q5RHP9 1530 aa10.42□□□□□ -0.74
CTNND1-230ENST00000532245 ATF3P18847 181 aa10.41□□□□□ -0.74
CTNND1-230ENST00000532245 CCDC136Q96JN2 1154 aa10.41□□□□□ -0.74
CTNND1-230ENST00000532245 TXNDC2Q86VQ3 553 aa10.41□□□□□ -0.74
CTNND1-230ENST00000532245 ARAP1Q96P48 1450 aa10.41□□□□□ -0.74
CTNND1-230ENST00000532245 PRXQ9BXM0 1461 aa10.41□□□□□ -0.74
CTNND1-230ENST00000532245 FTSJ3Q8IY81 847 aaKnown RBP10.4□□□□□ -0.74
CTNND1-230ENST00000532245 LRRC9Q6ZRR7 1453 aa10.4□□□□□ -0.74
CTNND1-230ENST00000532245 U2AF1L5P0DN76 240 aaPredicted RBP10.4□□□□□ -0.74
CTNND1-230ENST00000532245 EVA1CP58658 441 aa10.4□□□□□ -0.74
CTNND1-230ENST00000532245 U2AF1Q01081 240 aaKnown RBP eCLIP10.4□□□□□ -0.742e-10■■□□□ 12.3
CTNND1-230ENST00000532245 FYCO1Q9BQS8 1478 aa10.39□□□□□ -0.75
CTNND1-230ENST00000532245 FRAT1Q92837 279 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-230ENST00000532245 CD109Q6YHK3 1445 aa10.39□□□□□ -0.75
CTNND1-230ENST00000532245 ANKRD50Q9ULJ7 1429 aa10.39□□□□□ -0.75
CTNND1-230ENST00000532245 PEG3Q9GZU2 1588 aa10.39□□□□□ -0.75
CTNND1-230ENST00000532245 PSME1Q06323 249 aa10.39□□□□□ -0.75
CTNND1-230ENST00000532245 RTL5Q5HYW3 569 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-230ENST00000532245 IQGAP2Q13576 1575 aa10.38□□□□□ -0.75
CTNND1-230ENST00000532245 HSP90AA1P07900 732 aaKnown RBP10.38□□□□□ -0.75
CTNND1-230ENST00000532245 TROQ12816 1431 aaPredicted RBP10.38□□□□□ -0.75
CTNND1-230ENST00000532245 KTN1Q86UP2 1357 aaKnown RBP10.37□□□□□ -0.75
CTNND1-230ENST00000532245 PLB1Q6P1J6 1458 aa10.37□□□□□ -0.75
CTNND1-230ENST00000532245 EFCAB5A4FU69 1503 aa10.37□□□□□ -0.75
CTNND1-230ENST00000532245 UPF2Q9HAU5 1272 aaKnown RBP10.37□□□□□ -0.75
CTNND1-230ENST00000532245 ST20-MTHFSA0A0A6YYL1 179 aa10.37□□□□□ -0.75
CTNND1-230ENST00000532245 PROSER2Q86WR7 435 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-230ENST00000532245 POGZQ7Z3K3 1410 aa10.36□□□□□ -0.75
CTNND1-230ENST00000532245 THEMISQ8N1K5 641 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-230ENST00000532245 EVC2Q86UK5 1308 aa10.36□□□□□ -0.75
CTNND1-230ENST00000532245 TMEM132EQ6IEE7 984 aa10.36□□□□□ -0.75
CTNND1-230ENST00000532245 CDK13Q14004 1512 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms