RNA–Protein interactions for RNA: ENST00000532041.5

PICALM-218, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-218ENST00000532041 ZFYVE16Q7Z3T8 1539 aa37.9■■■■□ 3.66
PICALM-218ENST00000532041 MADDQ8WXG6 1647 aa37.9■■■■□ 3.66
PICALM-218ENST00000532041 PTPRMP28827 1452 aa37.89■■■■□ 3.66
PICALM-218ENST00000532041 SIGLEC1Q9BZZ2 1709 aa37.88■■■■□ 3.65
PICALM-218ENST00000532041 CLIP1P30622 1438 aa37.87■■■■□ 3.65
PICALM-218ENST00000532041 ARID4BQ4LE39 1312 aaPredicted RBP37.86■■■■□ 3.65
PICALM-218ENST00000532041 CCDC18Q5T9S5 1454 aa37.85■■■■□ 3.65
PICALM-218ENST00000532041 MAGI2Q86UL8 1455 aa37.84■■■■□ 3.65
PICALM-218ENST00000532041 FYCO1Q9BQS8 1478 aa37.81■■■■□ 3.64
PICALM-218ENST00000532041 ARHGAP5Q13017 1502 aa37.81■■■■□ 3.64
PICALM-218ENST00000532041 EFCAB2Q5VUJ9 269 aa37.8■■■■□ 3.64
PICALM-218ENST00000532041 CDC42BPBQ9Y5S2 1711 aa37.76■■■■□ 3.64
PICALM-218ENST00000532041 RIMS1Q86UR5 1692 aaKnown RBP37.75■■■■□ 3.63
PICALM-218ENST00000532041 PREX2Q70Z35 1606 aa37.73■■■■□ 3.63
PICALM-218ENST00000532041 KDM5CP41229 1560 aa37.69■■■■□ 3.62
PICALM-218ENST00000532041 ZNF518AQ6AHZ1 1483 aa37.69■■■■□ 3.62
PICALM-218ENST00000532041 ATP10AO60312 1499 aa37.64■■■■□ 3.62
PICALM-218ENST00000532041 CDC42BPAQ5VT25 1732 aa37.63■■■■□ 3.61
PICALM-218ENST00000532041 C9orf84Q5VXU9 1444 aa37.62■■■■□ 3.61
PICALM-218ENST00000532041 ABCC1P33527 1531 aa37.62■■■■□ 3.61
PICALM-218ENST00000532041 ARHGEF12Q9NZN5 1544 aa37.6■■■■□ 3.61
PICALM-218ENST00000532041 AFAP1Q8N556 730 aa37.59■■■■□ 3.61
PICALM-218ENST00000532041 ITSN2Q9NZM3 1697 aa37.57■■■■□ 3.61
PICALM-218ENST00000532041 FER1L4A9Z1Z3 1794 aa37.57■■■■□ 3.6
PICALM-218ENST00000532041 DIP2CQ9Y2E4 1556 aa37.55■■■■□ 3.6
PICALM-218ENST00000532041 TRAPPC8Q9Y2L5 1435 aa37.54■■■■□ 3.6
PICALM-218ENST00000532041 MLECQ14165 292 aa37.54■■■■□ 3.6
PICALM-218ENST00000532041 LMTK3Q96Q04 1460 aa37.53■■■■□ 3.6
PICALM-218ENST00000532041 ABCA6Q8N139 1617 aa37.52■■■■□ 3.6
PICALM-218ENST00000532041 MLH3Q9UHC1 1453 aa37.49■■■■□ 3.59
PICALM-218ENST00000532041 CEP162Q5TB80 1403 aa37.47■■■■□ 3.59
PICALM-218ENST00000532041 SAMD9LQ8IVG5 1584 aa37.46■■■■□ 3.59
PICALM-218ENST00000532041 GPATCH8Q9UKJ3 1502 aaKnown RBP37.46■■■■□ 3.59
PICALM-218ENST00000532041 REREQ9P2R6 1566 aa37.46■■■■□ 3.59
PICALM-218ENST00000532041 PLPPR3Q6T4P5 718 aa37.43■■■■□ 3.58
PICALM-218ENST00000532041 ILDR1Q86SU0 546 aaPredicted RBP37.41■■■■□ 3.58
PICALM-218ENST00000532041 KIDINS220Q9ULH0 1771 aa37.4■■■■□ 3.58
PICALM-218ENST00000532041 SYCP2Q9BX26 1530 aa37.4■■■■□ 3.58
PICALM-218ENST00000532041 MYT1LQ9UL68 1186 aa37.38■■■■□ 3.57
PICALM-218ENST00000532041 MTUS2Q5JR59 1369 aa37.36■■■■□ 3.57
PICALM-218ENST00000532041 ZNF777Q9ULD5 760 aaPredicted RBP37.34■■■■□ 3.57
PICALM-218ENST00000532041 EHBP1L1Q8N3D4 1523 aa37.32■■■■□ 3.57
PICALM-218ENST00000532041 AGLP35573 1532 aa37.31■■■■□ 3.56
PICALM-218ENST00000532041 CCNB3Q8WWL7 1395 aa37.3■■■■□ 3.56
PICALM-218ENST00000532041 TIAM1Q13009 1591 aa37.29■■■■□ 3.56
PICALM-218ENST00000532041 HSPA2P54652 639 aa37.27■■■■□ 3.56
PICALM-218ENST00000532041 KIAA1107Q9UPP5 1409 aa37.25■■■■□ 3.55
PICALM-218ENST00000532041 CFDP1Q9UEE9 299 aaPredicted RBP37.24■■■■□ 3.55
PICALM-218ENST00000532041 CEBPAP49715 358 aaPredicted RBP37.23■■■■□ 3.55
PICALM-218ENST00000532041 HNRNPMP52272 730 aaKnown RBP eCLIP37.23■■■■□ 3.552e-6■■■■■ 27.7
PICALM-218ENST00000532041 PLEKHH2Q8IVE3 1493 aa37.23■■■■□ 3.55
PICALM-218ENST00000532041 INO80Q9ULG1 1556 aaPredicted RBP37.21■■■■□ 3.55
PICALM-218ENST00000532041 PREX1Q8TCU6 1659 aa37.21■■■■□ 3.55
PICALM-218ENST00000532041 ATP7AQ04656 1500 aa37.2■■■■□ 3.55
PICALM-218ENST00000532041 SPAG9O60271 1321 aaKnown RBP37.18■■■■□ 3.54
PICALM-218ENST00000532041 C3P01024 1663 aa37.15■■■■□ 3.54
PICALM-218ENST00000532041 LOC105371045A0A1W2PR82 267 aa37.14■■■■□ 3.54
PICALM-218ENST00000532041 ZNF644Q9H582 1327 aaPredicted RBP37.12■■■■□ 3.53
PICALM-218ENST00000532041 PLXNC1O60486 1568 aa37.12■■■■□ 3.53
PICALM-218ENST00000532041 SUPT6HQ7KZ85 1726 aaKnown RBP37.09■■■■□ 3.53
PICALM-218ENST00000532041 NCOA2Q15596 1464 aa37.08■■■■□ 3.53
PICALM-218ENST00000532041 MBD5Q9P267 1494 aa37.08■■■■□ 3.53
PICALM-218ENST00000532041 VPS8Q8N3P4 1428 aa37.06■■■■□ 3.52
PICALM-218ENST00000532041 A2MP01023 1474 aa37.04■■■■□ 3.52
PICALM-218ENST00000532041 SETD1BQ9UPS6 1966 aaKnown RBP37.03■■■■□ 3.52
PICALM-218ENST00000532041 UHRF1BP1Q6BDS2 1440 aa37.02■■■■□ 3.52
PICALM-218ENST00000532041 CNTLNQ9NXG0 1405 aa37.02■■■■□ 3.52
PICALM-218ENST00000532041 MROH2AA6NES4 1674 aa36.99■■■■□ 3.51
PICALM-218ENST00000532041 ESF1Q9H501 851 aaKnown RBP36.98■■■■□ 3.51
PICALM-218ENST00000532041 ADGBQ8N7X0 1667 aa36.98■■■■□ 3.51
PICALM-218ENST00000532041 CAMSAP2Q08AD1 1489 aa36.97■■■■□ 3.51
PICALM-218ENST00000532041 LRRC9Q6ZRR7 1453 aa36.94■■■■□ 3.5
PICALM-218ENST00000532041 STRCQ7RTU9 1775 aa36.94■■■■□ 3.5
PICALM-218ENST00000532041 FBXO41Q8TF61 875 aa36.92■■■■□ 3.5
PICALM-218ENST00000532041 CLTCQ00610 1675 aaKnown RBP36.91■■■■□ 3.5
PICALM-218ENST00000532041 RTEL1-TNFRSF6BF6WH68 1400 aa36.91■■■■□ 3.5
PICALM-218ENST00000532041 CCDC141Q6ZP82 1450 aa36.9■■■■□ 3.5
PICALM-218ENST00000532041 ZMYM3Q14202 1370 aa36.85■■■■□ 3.49
PICALM-218ENST00000532041 NPATQ14207 1427 aa36.85■■■■□ 3.49
PICALM-218ENST00000532041 MAP3K1Q13233 1512 aa36.84■■■■□ 3.49
PICALM-218ENST00000532041 ARHGEF5Q12774 1597 aa36.82■■■■□ 3.48
PICALM-218ENST00000532041 GGT6Q6P531 493 aa36.8■■■■□ 3.48
PICALM-218ENST00000532041 KANK4Q5T7N3 995 aaPredicted RBP36.79■■■■□ 3.48
PICALM-218ENST00000532041 DHX29Q7Z478 1369 aaKnown RBP36.78■■■■□ 3.48
PICALM-218ENST00000532041 PTPRKQ15262 1439 aa36.75■■■■□ 3.47
PICALM-218ENST00000532041 MYO3AQ8NEV4 1616 aa36.73■■■■□ 3.47
PICALM-218ENST00000532041 NCOA1Q15788 1441 aa36.71■■■■□ 3.47
PICALM-218ENST00000532041 RSPH4AQ5TD94 716 aa36.7■■■■□ 3.47
PICALM-218ENST00000532041 ZNF142P52746 1687 aaPredicted RBP36.69■■■■□ 3.46
PICALM-218ENST00000532041 CERKQ8TCT0 537 aa36.68■■■■□ 3.46
PICALM-218ENST00000532041 PPP6R1Q9UPN7 881 aa36.68■■■■□ 3.46
PICALM-218ENST00000532041 MYOM3Q5VTT5 1437 aa36.68■■■■□ 3.46
PICALM-218ENST00000532041 DMRT2Q9Y5R5 561 aa36.67■■■■□ 3.46
PICALM-218ENST00000532041 PTPRTO14522 1441 aa36.67■■■■□ 3.46
PICALM-218ENST00000532041 CAMSAP1Q5T5Y3 1602 aa36.67■■■■□ 3.46
PICALM-218ENST00000532041 MAST1Q9Y2H9 1570 aa36.65■■■■□ 3.46
PICALM-218ENST00000532041 CEP170BQ9Y4F5 1589 aaPredicted RBP36.63■■■■□ 3.45
PICALM-218ENST00000532041 KIF3BO15066 747 aa36.63■■■■□ 3.45
PICALM-218ENST00000532041 MIA2Q96PC5 1412 aa36.62■■■■□ 3.45
PICALM-218ENST00000532041 KDM5DQ9BY66 1539 aa36.61■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms