RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 ZBED9Q6R2W3 1325 aa15.18■□□□□ 0.02
NXF1-211ENST00000531709 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
NXF1-211ENST00000531709 EFCAB5A4FU69 1503 aa15.16■□□□□ 0.02
NXF1-211ENST00000531709 CNTLNQ9NXG0 1405 aa15.16■□□□□ 0.02
NXF1-211ENST00000531709 AQRO60306 1485 aaKnown RBP eCLIP15.16■□□□□ 0.022e-7■■■□□ 19.2
NXF1-211ENST00000531709 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
NXF1-211ENST00000531709 FANCIQ9NVI1 1328 aa15.15■□□□□ 0.02
NXF1-211ENST00000531709 NUDCQ9Y266 331 aa15.14■□□□□ 0.01
NXF1-211ENST00000531709 CC2D1BQ5T0F9 858 aaKnown RBP15.14■□□□□ 0.01
NXF1-211ENST00000531709 DEKP35659 375 aaKnown RBP15.13■□□□□ 0.01
NXF1-211ENST00000531709 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
NXF1-211ENST00000531709 NUP155O75694 1391 aa15.11■□□□□ 0.01
NXF1-211ENST00000531709 ST20-MTHFSA0A0A6YYL1 179 aa15.11■□□□□ 0.01
NXF1-211ENST00000531709 CC2D2AQ9P2K1 1620 aa15.11■□□□□ 0.01
NXF1-211ENST00000531709 USP47Q96K76 1375 aa15.09■□□□□ 0.01
NXF1-211ENST00000531709 DNMBPQ6XZF7 1577 aa15.09■□□□□ 0.01
NXF1-211ENST00000531709 LAS1LQ9Y4W2 734 aaKnown RBP15.09■□□□□ 0.01
NXF1-211ENST00000531709 PTPN23Q9H3S7 1636 aa15.08■□□□□ 0
NXF1-211ENST00000531709 AKNAQ7Z591 1439 aa15.06■□□□□ 0
NXF1-211ENST00000531709 HNRNPMP52272 730 aaKnown RBP eCLIP15.06■□□□□ 02e-7■□□□□ 9.4
NXF1-211ENST00000531709 CDK13Q14004 1512 aaKnown RBP15.05■□□□□ -0
NXF1-211ENST00000531709 RCAN3Q9UKA8 241 aa15.04■□□□□ -0
NXF1-211ENST00000531709 EHBP1L1Q8N3D4 1523 aa15.04■□□□□ -0
NXF1-211ENST00000531709 WDR43Q15061 677 aaKnown RBP eCLIP15.03■□□□□ -0
NXF1-211ENST00000531709 SUPT6HQ7KZ85 1726 aaKnown RBP15.03■□□□□ -0
NXF1-211ENST00000531709 ANKRD30AQ9BXX3 1397 aa15.03■□□□□ -0
NXF1-211ENST00000531709 EXOC6Q8TAG9 804 aa15.02□□□□□ -0.01
NXF1-211ENST00000531709 ROCK2O75116 1388 aaKnown RBP15.02□□□□□ -0.01
NXF1-211ENST00000531709 CFAP43Q8NDM7 1665 aa15.01□□□□□ -0.01
NXF1-211ENST00000531709 PAK3O75914 559 aaPredicted RBP15.01□□□□□ -0.01
NXF1-211ENST00000531709 IPO9Q96P70 1041 aaKnown RBP15.01□□□□□ -0.01
NXF1-211ENST00000531709 PLIN1O60240 522 aa15□□□□□ -0.01
NXF1-211ENST00000531709 CANXP27824 592 aaKnown RBP15□□□□□ -0.01
NXF1-211ENST00000531709 ANKRD30BQ9BXX2 1392 aa15□□□□□ -0.01
NXF1-211ENST00000531709 SNAPC4Q5SXM2 1469 aa14.99□□□□□ -0.01
NXF1-211ENST00000531709 EPRSP07814 1512 aaKnown RBP14.99□□□□□ -0.01
NXF1-211ENST00000531709 URB2Q14146 1524 aaKnown RBP14.98□□□□□ -0.01
NXF1-211ENST00000531709 NEFMP07197 916 aa14.98□□□□□ -0.01
NXF1-211ENST00000531709 RALBP1Q15311 655 aa14.98□□□□□ -0.01
NXF1-211ENST00000531709 JPH4Q96JJ6 628 aa14.97□□□□□ -0.01
NXF1-211ENST00000531709 RTN4Q9NQC3 1192 aaKnown RBP14.97□□□□□ -0.01
NXF1-211ENST00000531709 NCOA1Q15788 1441 aa14.97□□□□□ -0.01
NXF1-211ENST00000531709 CUL7Q14999 1698 aa14.97□□□□□ -0.01
NXF1-211ENST00000531709 MIA2Q96PC5 1412 aa14.96□□□□□ -0.01
NXF1-211ENST00000531709 GRIN2BQ13224 1484 aa14.96□□□□□ -0.01
NXF1-211ENST00000531709 DAPK1P53355 1430 aa14.96□□□□□ -0.01
NXF1-211ENST00000531709 PNISRQ8TF01 805 aaKnown RBP14.96□□□□□ -0.02
NXF1-211ENST00000531709 KNSTRNQ9Y448 316 aa14.96□□□□□ -0.02
NXF1-211ENST00000531709 KTN1Q86UP2 1357 aaKnown RBP14.96□□□□□ -0.02
NXF1-211ENST00000531709 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
NXF1-211ENST00000531709 MYBBP1AQ9BQG0 1328 aaKnown RBP14.95□□□□□ -0.02
NXF1-211ENST00000531709 NLRP13Q86W25 1043 aa14.95□□□□□ -0.02
NXF1-211ENST00000531709 KIF15Q9NS87 1388 aa14.95□□□□□ -0.02
NXF1-211ENST00000531709 PRG4Q92954 1404 aaPredicted RBP14.95□□□□□ -0.02
NXF1-211ENST00000531709 RGS3P49796 1198 aa14.94□□□□□ -0.02
NXF1-211ENST00000531709 RRP1P56182 461 aaKnown RBP14.94□□□□□ -0.02
NXF1-211ENST00000531709 CHGAP10645 457 aaKnown RBP14.94□□□□□ -0.02
NXF1-211ENST00000531709 CDCA7LQ96GN5 454 aa14.93□□□□□ -0.02
NXF1-211ENST00000531709 ABCC5O15440 1437 aa14.92□□□□□ -0.02
NXF1-211ENST00000531709 TMF1P82094 1093 aa14.91□□□□□ -0.02
NXF1-211ENST00000531709 ANKRD50Q9ULJ7 1429 aa14.91□□□□□ -0.02
NXF1-211ENST00000531709 PANK3Q9H999 370 aa14.91□□□□□ -0.02
NXF1-211ENST00000531709 UGGT2Q9NYU1 1516 aa14.9□□□□□ -0.02
NXF1-211ENST00000531709 TCERG1O14776 1098 aaKnown RBP14.9□□□□□ -0.02
NXF1-211ENST00000531709 PDE4AP27815 886 aa14.9□□□□□ -0.02
NXF1-211ENST00000531709 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.9□□□□□ -0.02
NXF1-211ENST00000531709 RPRD2Q5VT52 1461 aaKnown RBP14.9□□□□□ -0.02
NXF1-211ENST00000531709 SENP3Q9H4L4 574 aaPredicted RBP14.9□□□□□ -0.02
NXF1-211ENST00000531709 HECW1Q76N89 1606 aa14.89□□□□□ -0.03
NXF1-211ENST00000531709 NBPF1Q3BBV0 1214 aa14.89□□□□□ -0.03
NXF1-211ENST00000531709 ERCC6Q03468 1493 aa14.89□□□□□ -0.03
NXF1-211ENST00000531709 CARMIL2Q6F5E8 1435 aa14.89□□□□□ -0.03
NXF1-211ENST00000531709 NEUROD2Q15784 382 aa14.89□□□□□ -0.03
NXF1-211ENST00000531709 SMG6Q86US8 1419 aaKnown RBP14.87□□□□□ -0.03
NXF1-211ENST00000531709 THOC2Q8NI27 1593 aaKnown RBP14.87□□□□□ -0.03
NXF1-211ENST00000531709 KIAA1107Q9UPP5 1409 aa14.87□□□□□ -0.03
NXF1-211ENST00000531709 CTTNBP2Q8WZ74 1663 aa14.87□□□□□ -0.03
NXF1-211ENST00000531709 ROCK1Q13464 1354 aa14.86□□□□□ -0.03
NXF1-211ENST00000531709 TNNT2P45379 298 aaPredicted RBP14.85□□□□□ -0.03
NXF1-211ENST00000531709 SLC4A3P48751 1232 aa14.85□□□□□ -0.03
NXF1-211ENST00000531709 CRBNQ96SW2 442 aa14.85□□□□□ -0.03
NXF1-211ENST00000531709 IQGAP2Q13576 1575 aa14.85□□□□□ -0.03
NXF1-211ENST00000531709 MAGI3Q5TCQ9 1506 aa14.84□□□□□ -0.03
NXF1-211ENST00000531709 SKAP1Q86WV1 359 aa14.84□□□□□ -0.03
NXF1-211ENST00000531709 DDRGK1Q96HY6 314 aa14.84□□□□□ -0.03
NXF1-211ENST00000531709 PDE3BQ13370 1112 aa14.83□□□□□ -0.03
NXF1-211ENST00000531709 CCDC146Q8IYE0 955 aa14.83□□□□□ -0.03
NXF1-211ENST00000531709 PPM1GO15355 546 aaPredicted RBP14.83□□□□□ -0.04
NXF1-211ENST00000531709 ARID4BQ4LE39 1312 aaPredicted RBP14.83□□□□□ -0.04
NXF1-211ENST00000531709 CCDC144AA2RUR9 1427 aa14.83□□□□□ -0.04
NXF1-211ENST00000531709 ARXQ96QS3 562 aa14.82□□□□□ -0.04
NXF1-211ENST00000531709 TROQ12816 1431 aaPredicted RBP14.81□□□□□ -0.04
NXF1-211ENST00000531709 KDM6BO15054 1643 aa14.81□□□□□ -0.04
NXF1-211ENST00000531709 BRD4O60885 1362 aaPredicted RBP14.8□□□□□ -0.04
NXF1-211ENST00000531709 FRAT1Q92837 279 aaPredicted RBP14.8□□□□□ -0.04
NXF1-211ENST00000531709 PLB1Q6P1J6 1458 aa14.79□□□□□ -0.04
NXF1-211ENST00000531709 TCOF1Q13428 1488 aaKnown RBP14.79□□□□□ -0.04
NXF1-211ENST00000531709 LAMC3Q9Y6N6 1575 aa14.79□□□□□ -0.04
NXF1-211ENST00000531709 CDCA8Q53HL2 280 aa14.78□□□□□ -0.04
NXF1-211ENST00000531709 ADAMTS8Q9UP79 889 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms