RNA–Protein interactions for RNA: ENST00000531413.5

CFL1-212, Transcript of cofilin 1, humanhuman

TSL 3 BASIC

Gene CFL1, Length 636 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-212ENST00000531413 MAGI2Q86UL8 1455 aa27.56■■■□□ 2
CFL1-212ENST00000531413 RAPGEF6Q8TEU7 1601 aa27.53■■■□□ 2
CFL1-212ENST00000531413 P3H3Q8IVL6 736 aa27.51■■□□□ 1.99
CFL1-212ENST00000531413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.49■■□□□ 1.99
CFL1-212ENST00000531413 HNRNPUL2Q1KMD3 747 aaKnown RBP27.49■■□□□ 1.99
CFL1-212ENST00000531413 FAM9AQ8IZU1 332 aaPredicted RBP27.48■■□□□ 1.99
CFL1-212ENST00000531413 MED1Q15648 1581 aaPredicted RBP27.48■■□□□ 1.99
CFL1-212ENST00000531413 ATP10AO60312 1499 aa27.44■■□□□ 1.98
CFL1-212ENST00000531413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.43■■□□□ 1.986e-7■■■■□ 21.8
CFL1-212ENST00000531413 UBAP1LF5GYI3 381 aa27.43■■□□□ 1.98
CFL1-212ENST00000531413 C9orf84Q5VXU9 1444 aa27.42■■□□□ 1.98
CFL1-212ENST00000531413 C3P01024 1663 aa27.41■■□□□ 1.98
CFL1-212ENST00000531413 NUP153P49790 1475 aaKnown RBP27.4■■□□□ 1.98
CFL1-212ENST00000531413 NCOA1Q15788 1441 aa27.39■■□□□ 1.97
CFL1-212ENST00000531413 SAMD9Q5K651 1589 aa27.35■■□□□ 1.97
CFL1-212ENST00000531413 SCAPERQ9BY12 1400 aa27.34■■□□□ 1.97
CFL1-212ENST00000531413 ZNF335Q9H4Z2 1342 aaPredicted RBP27.3■■□□□ 1.96
CFL1-212ENST00000531413 PLEKHD1A6NEE1 506 aa27.29■■□□□ 1.96
CFL1-212ENST00000531413 PRXQ9BXM0 1461 aa27.29■■□□□ 1.96
CFL1-212ENST00000531413 CAMSAP1Q5T5Y3 1602 aa27.26■■□□□ 1.95
CFL1-212ENST00000531413 HSPA1LP34931 641 aa27.25■■□□□ 1.95
CFL1-212ENST00000531413 TRAPPC8Q9Y2L5 1435 aa27.24■■□□□ 1.95
CFL1-212ENST00000531413 PLCH2O75038 1416 aa27.18■■□□□ 1.94
CFL1-212ENST00000531413 DIP2CQ9Y2E4 1556 aa27.17■■□□□ 1.94
CFL1-212ENST00000531413 NCKAP5LQ9HCH0 1330 aa27.16■■□□□ 1.94
CFL1-212ENST00000531413 PHF23Q9BUL5 403 aaPredicted RBP27.15■■□□□ 1.94
CFL1-212ENST00000531413 REREQ9P2R6 1566 aa27.14■■□□□ 1.94
CFL1-212ENST00000531413 SCAF1Q9H7N4 1312 aaKnown RBP27.14■■□□□ 1.93
CFL1-212ENST00000531413 KDM5CP41229 1560 aa27.13■■□□□ 1.93
CFL1-212ENST00000531413 MYO5CQ9NQX4 1742 aa27.12■■□□□ 1.93
CFL1-212ENST00000531413 ZNF518AQ6AHZ1 1483 aa27.11■■□□□ 1.93
CFL1-212ENST00000531413 ABCA6Q8N139 1617 aa27.1■■□□□ 1.93
CFL1-212ENST00000531413 PIP4K2BP78356 416 aa27.1■■□□□ 1.93
CFL1-212ENST00000531413 AGLP35573 1532 aa27.08■■□□□ 1.93
CFL1-212ENST00000531413 SUPT6HQ7KZ85 1726 aaKnown RBP27.07■■□□□ 1.92
CFL1-212ENST00000531413 ESF1Q9H501 851 aaKnown RBP27.07■■□□□ 1.92
CFL1-212ENST00000531413 AFAP1Q8N556 730 aa27.05■■□□□ 1.92
CFL1-212ENST00000531413 CDK13Q14004 1512 aaKnown RBP27.04■■□□□ 1.92
CFL1-212ENST00000531413 EFCAB2Q5VUJ9 269 aa27.03■■□□□ 1.92
CFL1-212ENST00000531413 ZNF142P52746 1687 aaPredicted RBP27.02■■□□□ 1.92
CFL1-212ENST00000531413 NPATQ14207 1427 aa27.02■■□□□ 1.92
CFL1-212ENST00000531413 PLA2R1Q13018 1463 aa27.01■■□□□ 1.91
CFL1-212ENST00000531413 CNTLNQ9NXG0 1405 aa27.01■■□□□ 1.91
CFL1-212ENST00000531413 MYT1LQ9UL68 1186 aa27.01■■□□□ 1.91
CFL1-212ENST00000531413 MROH2AA6NES4 1674 aa27.01■■□□□ 1.91
CFL1-212ENST00000531413 TCOF1Q13428 1488 aaKnown RBP27■■□□□ 1.91
CFL1-212ENST00000531413 PKD2Q13563 968 aa26.99■■□□□ 1.91
CFL1-212ENST00000531413 TOM1O60784 492 aa26.98■■□□□ 1.91
CFL1-212ENST00000531413 MYO3AQ8NEV4 1616 aa26.98■■□□□ 1.91
CFL1-212ENST00000531413 MLH3Q9UHC1 1453 aa26.94■■□□□ 1.9
CFL1-212ENST00000531413 RANGAP1P46060 587 aaPredicted RBP26.94■■□□□ 1.9
CFL1-212ENST00000531413 PPP6R1Q9UPN7 881 aa26.93■■□□□ 1.9
CFL1-212ENST00000531413 CEP170BQ9Y4F5 1589 aaPredicted RBP26.92■■□□□ 1.9
CFL1-212ENST00000531413 ARHGAP5Q13017 1502 aa26.9■■□□□ 1.9
CFL1-212ENST00000531413 KIF14Q15058 1648 aa26.9■■□□□ 1.9
CFL1-212ENST00000531413 ALKQ9UM73 1620 aa26.9■■□□□ 1.9
CFL1-212ENST00000531413 CPS1P31327 1500 aa26.89■■□□□ 1.89
CFL1-212ENST00000531413 ZMYM3Q14202 1370 aa26.88■■□□□ 1.89
CFL1-212ENST00000531413 KIDINS220Q9ULH0 1771 aa26.87■■□□□ 1.89
CFL1-212ENST00000531413 RGS17Q9UGC6 210 aaPredicted RBP26.86■■□□□ 1.89
CFL1-212ENST00000531413 CLTCQ00610 1675 aaKnown RBP26.83■■□□□ 1.89
CFL1-212ENST00000531413 CDC42BPBQ9Y5S2 1711 aa26.82■■□□□ 1.88
CFL1-212ENST00000531413 POLR1AO95602 1720 aaPredicted RBP26.82■■□□□ 1.88
CFL1-212ENST00000531413 SHANK2Q9UPX8 1470 aa26.81■■□□□ 1.88
CFL1-212ENST00000531413 PTPRKQ15262 1439 aa26.8■■□□□ 1.88
CFL1-212ENST00000531413 ITSN2Q9NZM3 1697 aa26.79■■□□□ 1.88
CFL1-212ENST00000531413 SENP3Q9H4L4 574 aaPredicted RBP26.78■■□□□ 1.88
CFL1-212ENST00000531413 NEURL4Q96JN8 1562 aa26.77■■□□□ 1.88
CFL1-212ENST00000531413 ABCC1P33527 1531 aa26.76■■□□□ 1.87
CFL1-212ENST00000531413 DNMT1P26358 1616 aaKnown RBP26.74■■□□□ 1.87
CFL1-212ENST00000531413 VWDEQ8N2E2 1590 aa26.71■■□□□ 1.87
CFL1-212ENST00000531413 A2ML1A8K2U0 1454 aa26.69■■□□□ 1.86
CFL1-212ENST00000531413 PREX2Q70Z35 1606 aa26.68■■□□□ 1.86
CFL1-212ENST00000531413 TROQ12816 1431 aaPredicted RBP26.67■■□□□ 1.86
CFL1-212ENST00000531413 CSRNP3Q8WYN3 585 aa26.67■■□□□ 1.86
CFL1-212ENST00000531413 SETD1AO15047 1707 aaKnown RBP26.67■■□□□ 1.86
CFL1-212ENST00000531413 POTEAQ6S8J7 498 aa26.64■■□□□ 1.86
CFL1-212ENST00000531413 CDK11AQ9UQ88 783 aaPredicted RBP26.64■■□□□ 1.86
CFL1-212ENST00000531413 ATP1B4Q9UN42 357 aaPredicted RBP26.63■■□□□ 1.85
CFL1-212ENST00000531413 SAMD9LQ8IVG5 1584 aa26.63■■□□□ 1.85
CFL1-212ENST00000531413 STRCP1A6NGW2 1772 aa26.61■■□□□ 1.85
CFL1-212ENST00000531413 CLIP1P30622 1438 aa26.6■■□□□ 1.85
CFL1-212ENST00000531413 RNF17Q9BXT8 1623 aaKnown RBP26.6■■□□□ 1.85
CFL1-212ENST00000531413 LRRIQ1Q96JM4 1722 aa26.59■■□□□ 1.85
CFL1-212ENST00000531413 PLXNC1O60486 1568 aa26.58■■□□□ 1.85
CFL1-212ENST00000531413 CDC42BPAQ5VT25 1732 aa26.54■■□□□ 1.84
CFL1-212ENST00000531413 LRRC7Q96NW7 1537 aa26.54■■□□□ 1.84
CFL1-212ENST00000531413 GGT6Q6P531 493 aa26.51■■□□□ 1.83
CFL1-212ENST00000531413 SYNMO15061 1565 aa26.5■■□□□ 1.83
CFL1-212ENST00000531413 FMN1Q68DA7 1419 aa26.49■■□□□ 1.83
CFL1-212ENST00000531413 ATP7AQ04656 1500 aa26.49■■□□□ 1.83
CFL1-212ENST00000531413 A2MP01023 1474 aa26.49■■□□□ 1.83
CFL1-212ENST00000531413 DEPDC5O75140 1603 aa26.48■■□□□ 1.83
CFL1-212ENST00000531413 MED14O60244 1454 aa26.48■■□□□ 1.83
CFL1-212ENST00000531413 NPHP4O75161 1426 aaPredicted RBP26.48■■□□□ 1.83
CFL1-212ENST00000531413 IQGAP1P46940 1657 aa26.47■■□□□ 1.83
CFL1-212ENST00000531413 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.47■■□□□ 1.834e-13■□□□□ 9
CFL1-212ENST00000531413 SPAG9O60271 1321 aaKnown RBP26.47■■□□□ 1.83
CFL1-212ENST00000531413 ANKLE2Q86XL3 938 aa26.47■■□□□ 1.83
CFL1-212ENST00000531413 SYCP2Q9BX26 1530 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms