RNA–Protein interactions for RNA: ENST00000531173.1

GSDMD-210, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-210ENST00000531173 CCDC18Q5T9S5 1454 aa27.17■■□□□ 1.94
GSDMD-210ENST00000531173 MAGI2Q86UL8 1455 aa27.16■■□□□ 1.94
GSDMD-210ENST00000531173 CLIP1P30622 1438 aa27.16■■□□□ 1.94
GSDMD-210ENST00000531173 YEATS2Q9ULM3 1422 aa27.16■■□□□ 1.94
GSDMD-210ENST00000531173 PTPRMP28827 1452 aa27.15■■□□□ 1.94
GSDMD-210ENST00000531173 ZFYVE16Q7Z3T8 1539 aa27.15■■□□□ 1.94
GSDMD-210ENST00000531173 FYCO1Q9BQS8 1478 aa27.14■■□□□ 1.94
GSDMD-210ENST00000531173 MADDQ8WXG6 1647 aa27.13■■□□□ 1.93
GSDMD-210ENST00000531173 EFCAB2Q5VUJ9 269 aa27.12■■□□□ 1.93
GSDMD-210ENST00000531173 CDC42BPBQ9Y5S2 1711 aa27.12■■□□□ 1.93
GSDMD-210ENST00000531173 ARHGAP5Q13017 1502 aa27.08■■□□□ 1.93
GSDMD-210ENST00000531173 PREX2Q70Z35 1606 aa27.07■■□□□ 1.92
GSDMD-210ENST00000531173 KDM5CP41229 1560 aa27.06■■□□□ 1.92
GSDMD-210ENST00000531173 ARID4BQ4LE39 1312 aaPredicted RBP27.06■■□□□ 1.92
GSDMD-210ENST00000531173 ZNF518AQ6AHZ1 1483 aa27.03■■□□□ 1.92
GSDMD-210ENST00000531173 CDC42BPAQ5VT25 1732 aa27.02■■□□□ 1.92
GSDMD-210ENST00000531173 RIMS1Q86UR5 1692 aaKnown RBP27.01■■□□□ 1.91
GSDMD-210ENST00000531173 ATP10AO60312 1499 aa27■■□□□ 1.91
GSDMD-210ENST00000531173 ABCC1P33527 1531 aa26.99■■□□□ 1.91
GSDMD-210ENST00000531173 ARHGEF12Q9NZN5 1544 aa26.99■■□□□ 1.91
GSDMD-210ENST00000531173 AFAP1Q8N556 730 aa26.97■■□□□ 1.91
GSDMD-210ENST00000531173 C9orf84Q5VXU9 1444 aa26.96■■□□□ 1.91
GSDMD-210ENST00000531173 ITSN2Q9NZM3 1697 aa26.94■■□□□ 1.9
GSDMD-210ENST00000531173 MLH3Q9UHC1 1453 aa26.93■■□□□ 1.9
GSDMD-210ENST00000531173 DIP2CQ9Y2E4 1556 aa26.92■■□□□ 1.9
GSDMD-210ENST00000531173 TRAPPC8Q9Y2L5 1435 aa26.92■■□□□ 1.9
GSDMD-210ENST00000531173 GPATCH8Q9UKJ3 1502 aaKnown RBP26.91■■□□□ 1.9
GSDMD-210ENST00000531173 FER1L4A9Z1Z3 1794 aa26.91■■□□□ 1.9
GSDMD-210ENST00000531173 REREQ9P2R6 1566 aa26.9■■□□□ 1.9
GSDMD-210ENST00000531173 LMTK3Q96Q04 1460 aa26.9■■□□□ 1.9
GSDMD-210ENST00000531173 CEP162Q5TB80 1403 aa26.9■■□□□ 1.9
GSDMD-210ENST00000531173 ABCA6Q8N139 1617 aa26.89■■□□□ 1.9
GSDMD-210ENST00000531173 SAMD9LQ8IVG5 1584 aa26.88■■□□□ 1.89
GSDMD-210ENST00000531173 KIDINS220Q9ULH0 1771 aa26.85■■□□□ 1.89
GSDMD-210ENST00000531173 MLECQ14165 292 aa26.83■■□□□ 1.89
GSDMD-210ENST00000531173 AGLP35573 1532 aa26.8■■□□□ 1.88
GSDMD-210ENST00000531173 SYCP2Q9BX26 1530 aa26.8■■□□□ 1.88
GSDMD-210ENST00000531173 MTUS2Q5JR59 1369 aa26.78■■□□□ 1.88
GSDMD-210ENST00000531173 EHBP1L1Q8N3D4 1523 aa26.77■■□□□ 1.88
GSDMD-210ENST00000531173 KIAA1107Q9UPP5 1409 aa26.77■■□□□ 1.88
GSDMD-210ENST00000531173 TIAM1Q13009 1591 aa26.75■■□□□ 1.87
GSDMD-210ENST00000531173 CCNB3Q8WWL7 1395 aa26.75■■□□□ 1.87
GSDMD-210ENST00000531173 ILDR1Q86SU0 546 aaPredicted RBP26.73■■□□□ 1.87
GSDMD-210ENST00000531173 ZNF777Q9ULD5 760 aaPredicted RBP26.73■■□□□ 1.87
GSDMD-210ENST00000531173 PLEKHH2Q8IVE3 1493 aa26.73■■□□□ 1.87
GSDMD-210ENST00000531173 CFDP1Q9UEE9 299 aaPredicted RBP26.72■■□□□ 1.87
GSDMD-210ENST00000531173 HNRNPMP52272 730 aaKnown RBP eCLIP26.7■■□□□ 1.86
GSDMD-210ENST00000531173 MYT1LQ9UL68 1186 aa26.7■■□□□ 1.86
GSDMD-210ENST00000531173 INO80Q9ULG1 1556 aaPredicted RBP26.7■■□□□ 1.86
GSDMD-210ENST00000531173 LOC105371045A0A1W2PR82 267 aa26.68■■□□□ 1.86
GSDMD-210ENST00000531173 PLPPR3Q6T4P5 718 aa26.68■■□□□ 1.86
GSDMD-210ENST00000531173 ATP7AQ04656 1500 aa26.67■■□□□ 1.86
GSDMD-210ENST00000531173 CEBPAP49715 358 aaPredicted RBP26.66■■□□□ 1.86
GSDMD-210ENST00000531173 HSPA2P54652 639 aa26.66■■□□□ 1.86
GSDMD-210ENST00000531173 PREX1Q8TCU6 1659 aa26.66■■□□□ 1.86
GSDMD-210ENST00000531173 SETD1BQ9UPS6 1966 aaKnown RBP26.66■■□□□ 1.86
GSDMD-210ENST00000531173 SPAG9O60271 1321 aaKnown RBP26.65■■□□□ 1.86
GSDMD-210ENST00000531173 MBD5Q9P267 1494 aa26.65■■□□□ 1.86
GSDMD-210ENST00000531173 PLXNC1O60486 1568 aa26.65■■□□□ 1.86
GSDMD-210ENST00000531173 ZNF644Q9H582 1327 aaPredicted RBP26.65■■□□□ 1.86
GSDMD-210ENST00000531173 C3P01024 1663 aa26.63■■□□□ 1.85
GSDMD-210ENST00000531173 VPS8Q8N3P4 1428 aa26.62■■□□□ 1.85
GSDMD-210ENST00000531173 NCOA2Q15596 1464 aa26.62■■□□□ 1.85
GSDMD-210ENST00000531173 SUPT6HQ7KZ85 1726 aaKnown RBP26.6■■□□□ 1.85
GSDMD-210ENST00000531173 A2MP01023 1474 aa26.56■■□□□ 1.84
GSDMD-210ENST00000531173 CNTLNQ9NXG0 1405 aa26.56■■□□□ 1.84
GSDMD-210ENST00000531173 MROH2AA6NES4 1674 aa26.54■■□□□ 1.84
GSDMD-210ENST00000531173 ADGBQ8N7X0 1667 aa26.54■■□□□ 1.84
GSDMD-210ENST00000531173 LRRC9Q6ZRR7 1453 aa26.53■■□□□ 1.84
GSDMD-210ENST00000531173 MAP3K1Q13233 1512 aa26.51■■□□□ 1.83
GSDMD-210ENST00000531173 CAMSAP2Q08AD1 1489 aa26.51■■□□□ 1.83
GSDMD-210ENST00000531173 RTEL1-TNFRSF6BF6WH68 1400 aa26.51■■□□□ 1.83
GSDMD-210ENST00000531173 STRCQ7RTU9 1775 aa26.5■■□□□ 1.83
GSDMD-210ENST00000531173 UHRF1BP1Q6BDS2 1440 aa26.49■■□□□ 1.83
GSDMD-210ENST00000531173 CCDC141Q6ZP82 1450 aa26.47■■□□□ 1.83
GSDMD-210ENST00000531173 ESF1Q9H501 851 aaKnown RBP26.46■■□□□ 1.83
GSDMD-210ENST00000531173 CLTCQ00610 1675 aaKnown RBP26.44■■□□□ 1.82
GSDMD-210ENST00000531173 KANK4Q5T7N3 995 aaPredicted RBP26.44■■□□□ 1.82
GSDMD-210ENST00000531173 NPATQ14207 1427 aa26.44■■□□□ 1.82
GSDMD-210ENST00000531173 ARHGEF5Q12774 1597 aa26.44■■□□□ 1.82
GSDMD-210ENST00000531173 ZMYM3Q14202 1370 aa26.44■■□□□ 1.82
GSDMD-210ENST00000531173 FBXO41Q8TF61 875 aa26.42■■□□□ 1.82
GSDMD-210ENST00000531173 DHX29Q7Z478 1369 aaKnown RBP26.41■■□□□ 1.82
GSDMD-210ENST00000531173 RSPH4AQ5TD94 716 aa26.4■■□□□ 1.82
GSDMD-210ENST00000531173 PPP6R1Q9UPN7 881 aa26.37■■□□□ 1.81
GSDMD-210ENST00000531173 PTPRKQ15262 1439 aa26.37■■□□□ 1.81
GSDMD-210ENST00000531173 GGT6Q6P531 493 aa26.35■■□□□ 1.81
GSDMD-210ENST00000531173 MYOM3Q5VTT5 1437 aa26.33■■□□□ 1.81
GSDMD-210ENST00000531173 MIA2Q96PC5 1412 aa26.32■■□□□ 1.8
GSDMD-210ENST00000531173 MAST1Q9Y2H9 1570 aa26.32■■□□□ 1.8
GSDMD-210ENST00000531173 NCOA1Q15788 1441 aa26.31■■□□□ 1.8
GSDMD-210ENST00000531173 MYO3AQ8NEV4 1616 aa26.31■■□□□ 1.8
GSDMD-210ENST00000531173 ZNF142P52746 1687 aaPredicted RBP26.31■■□□□ 1.8
GSDMD-210ENST00000531173 DMRT2Q9Y5R5 561 aa26.29■■□□□ 1.8
GSDMD-210ENST00000531173 PTPRTO14522 1441 aa26.29■■□□□ 1.8
GSDMD-210ENST00000531173 FAM135AQ9P2D6 1515 aa26.29■■□□□ 1.8
GSDMD-210ENST00000531173 KIF3BO15066 747 aa26.26■■□□□ 1.79
GSDMD-210ENST00000531173 CERKQ8TCT0 537 aa26.26■■□□□ 1.79
GSDMD-210ENST00000531173 CAMSAP1Q5T5Y3 1602 aa26.25■■□□□ 1.79
GSDMD-210ENST00000531173 CEP170BQ9Y4F5 1589 aaPredicted RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms