RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 CLIP1P30622 1438 aa27.75■■■□□ 2.03
PKP3-207ENST00000530695 SCAPERQ9BY12 1400 aa27.75■■■□□ 2.03
PKP3-207ENST00000530695 CASKIN1Q8WXD9 1431 aa27.73■■■□□ 2.03
PKP3-207ENST00000530695 EFCAB2Q5VUJ9 269 aa27.72■■■□□ 2.03
PKP3-207ENST00000530695 POGZQ7Z3K3 1410 aa27.72■■■□□ 2.03
PKP3-207ENST00000530695 MAGI2Q86UL8 1455 aa27.71■■■□□ 2.03
PKP3-207ENST00000530695 CCDC18Q5T9S5 1454 aa27.7■■■□□ 2.03
PKP3-207ENST00000530695 YEATS2Q9ULM3 1422 aa27.7■■■□□ 2.03
PKP3-207ENST00000530695 ARHGAP5Q13017 1502 aa27.69■■■□□ 2.02
PKP3-207ENST00000530695 SIGLEC1Q9BZZ2 1709 aa27.69■■■□□ 2.02
PKP3-207ENST00000530695 CDC42BPBQ9Y5S2 1711 aa27.67■■■□□ 2.02
PKP3-207ENST00000530695 RIMS1Q86UR5 1692 aaKnown RBP27.67■■■□□ 2.02
PKP3-207ENST00000530695 FYCO1Q9BQS8 1478 aa27.64■■■□□ 2.02
PKP3-207ENST00000530695 PREX2Q70Z35 1606 aa27.61■■■□□ 2.01
PKP3-207ENST00000530695 ZNF518AQ6AHZ1 1483 aa27.59■■■□□ 2.01
PKP3-207ENST00000530695 CDC42BPAQ5VT25 1732 aa27.57■■■□□ 2
PKP3-207ENST00000530695 FER1L4A9Z1Z3 1794 aa27.57■■■□□ 2
PKP3-207ENST00000530695 ATP10AO60312 1499 aa27.57■■■□□ 2
PKP3-207ENST00000530695 KDM5CP41229 1560 aa27.56■■■□□ 2
PKP3-207ENST00000530695 C9orf84Q5VXU9 1444 aa27.54■■■□□ 2
PKP3-207ENST00000530695 MLECQ14165 292 aa27.53■■■□□ 2
PKP3-207ENST00000530695 AFAP1Q8N556 730 aa27.53■■■□□ 2
PKP3-207ENST00000530695 ITSN2Q9NZM3 1697 aa27.52■■■□□ 2
PKP3-207ENST00000530695 ABCC1P33527 1531 aa27.51■■□□□ 1.99
PKP3-207ENST00000530695 PLPPR3Q6T4P5 718 aa27.48■■□□□ 1.99
PKP3-207ENST00000530695 MYT1LQ9UL68 1186 aa27.48■■□□□ 1.99
PKP3-207ENST00000530695 LMTK3Q96Q04 1460 aa27.47■■□□□ 1.99
PKP3-207ENST00000530695 ARHGEF12Q9NZN5 1544 aa27.46■■□□□ 1.99
PKP3-207ENST00000530695 ILDR1Q86SU0 546 aaPredicted RBP27.46■■□□□ 1.99
PKP3-207ENST00000530695 DIP2CQ9Y2E4 1556 aa27.46■■□□□ 1.99
PKP3-207ENST00000530695 ABCA6Q8N139 1617 aa27.44■■□□□ 1.98
PKP3-207ENST00000530695 MLH3Q9UHC1 1453 aa27.44■■□□□ 1.98
PKP3-207ENST00000530695 TRAPPC8Q9Y2L5 1435 aa27.43■■□□□ 1.98
PKP3-207ENST00000530695 REREQ9P2R6 1566 aa27.41■■□□□ 1.98
PKP3-207ENST00000530695 SAMD9LQ8IVG5 1584 aa27.39■■□□□ 1.98
PKP3-207ENST00000530695 GPATCH8Q9UKJ3 1502 aaKnown RBP27.39■■□□□ 1.98
PKP3-207ENST00000530695 KIDINS220Q9ULH0 1771 aa27.39■■□□□ 1.98
PKP3-207ENST00000530695 ZNF777Q9ULD5 760 aaPredicted RBP27.38■■□□□ 1.97
PKP3-207ENST00000530695 CEP162Q5TB80 1403 aa27.37■■□□□ 1.97
PKP3-207ENST00000530695 MTUS2Q5JR59 1369 aa27.35■■□□□ 1.97
PKP3-207ENST00000530695 SYCP2Q9BX26 1530 aa27.34■■□□□ 1.97
PKP3-207ENST00000530695 CCNB3Q8WWL7 1395 aa27.32■■□□□ 1.96
PKP3-207ENST00000530695 HSPA2P54652 639 aa27.31■■□□□ 1.96
PKP3-207ENST00000530695 AGLP35573 1532 aa27.31■■□□□ 1.96
PKP3-207ENST00000530695 PREX1Q8TCU6 1659 aa27.3■■□□□ 1.96
PKP3-207ENST00000530695 CFDP1Q9UEE9 299 aaPredicted RBP27.3■■□□□ 1.96
PKP3-207ENST00000530695 EHBP1L1Q8N3D4 1523 aa27.28■■□□□ 1.96
PKP3-207ENST00000530695 SETD1BQ9UPS6 1966 aaKnown RBP27.28■■□□□ 1.96
PKP3-207ENST00000530695 PLEKHH2Q8IVE3 1493 aa27.27■■□□□ 1.96
PKP3-207ENST00000530695 CEBPAP49715 358 aaPredicted RBP27.27■■□□□ 1.96
PKP3-207ENST00000530695 HNRNPMP52272 730 aaKnown RBP eCLIP27.27■■□□□ 1.96
PKP3-207ENST00000530695 KIAA1107Q9UPP5 1409 aa27.25■■□□□ 1.95
PKP3-207ENST00000530695 TIAM1Q13009 1591 aa27.25■■□□□ 1.95
PKP3-207ENST00000530695 SPAG9O60271 1321 aaKnown RBP27.24■■□□□ 1.95
PKP3-207ENST00000530695 C3P01024 1663 aa27.24■■□□□ 1.95
PKP3-207ENST00000530695 ATP7AQ04656 1500 aa27.22■■□□□ 1.95
PKP3-207ENST00000530695 SUPT6HQ7KZ85 1726 aaKnown RBP27.21■■□□□ 1.95
PKP3-207ENST00000530695 ESF1Q9H501 851 aaKnown RBP27.21■■□□□ 1.95
PKP3-207ENST00000530695 INO80Q9ULG1 1556 aaPredicted RBP27.21■■□□□ 1.95
PKP3-207ENST00000530695 LOC105371045A0A1W2PR82 267 aa27.15■■□□□ 1.94
PKP3-207ENST00000530695 ZNF644Q9H582 1327 aaPredicted RBP27.15■■□□□ 1.94
PKP3-207ENST00000530695 UHRF1BP1Q6BDS2 1440 aa27.14■■□□□ 1.93
PKP3-207ENST00000530695 CNTLNQ9NXG0 1405 aa27.13■■□□□ 1.93
PKP3-207ENST00000530695 ADGBQ8N7X0 1667 aa27.12■■□□□ 1.93
PKP3-207ENST00000530695 PLXNC1O60486 1568 aa27.12■■□□□ 1.93
PKP3-207ENST00000530695 MROH2AA6NES4 1674 aa27.11■■□□□ 1.93
PKP3-207ENST00000530695 FBXO41Q8TF61 875 aa27.11■■□□□ 1.93
PKP3-207ENST00000530695 A2MP01023 1474 aa27.11■■□□□ 1.93
PKP3-207ENST00000530695 NCOA2Q15596 1464 aa27.1■■□□□ 1.93
PKP3-207ENST00000530695 MBD5Q9P267 1494 aa27.09■■□□□ 1.93
PKP3-207ENST00000530695 STRCQ7RTU9 1775 aa27.08■■□□□ 1.93
PKP3-207ENST00000530695 VPS8Q8N3P4 1428 aa27.07■■□□□ 1.92
PKP3-207ENST00000530695 CLTCQ00610 1675 aaKnown RBP27.06■■□□□ 1.92
PKP3-207ENST00000530695 CAMSAP2Q08AD1 1489 aa27.02■■□□□ 1.92
PKP3-207ENST00000530695 RTEL1-TNFRSF6BF6WH68 1400 aa27.01■■□□□ 1.91
PKP3-207ENST00000530695 ZMYM3Q14202 1370 aa27■■□□□ 1.91
PKP3-207ENST00000530695 CCDC141Q6ZP82 1450 aa27■■□□□ 1.91
PKP3-207ENST00000530695 LRRC9Q6ZRR7 1453 aa27■■□□□ 1.91
PKP3-207ENST00000530695 GGT6Q6P531 493 aa26.99■■□□□ 1.91
PKP3-207ENST00000530695 NPATQ14207 1427 aa26.99■■□□□ 1.91
PKP3-207ENST00000530695 DMRT2Q9Y5R5 561 aa26.97■■□□□ 1.91
PKP3-207ENST00000530695 RSPH4AQ5TD94 716 aa26.94■■□□□ 1.9
PKP3-207ENST00000530695 MAP3K1Q13233 1512 aa26.94■■□□□ 1.9
PKP3-207ENST00000530695 ARHGEF5Q12774 1597 aa26.93■■□□□ 1.9
PKP3-207ENST00000530695 DHX29Q7Z478 1369 aaKnown RBP26.93■■□□□ 1.9
PKP3-207ENST00000530695 CERKQ8TCT0 537 aa26.92■■□□□ 1.9
PKP3-207ENST00000530695 PPP6R1Q9UPN7 881 aa26.92■■□□□ 1.9
PKP3-207ENST00000530695 MYO3AQ8NEV4 1616 aa26.9■■□□□ 1.9
PKP3-207ENST00000530695 KANK4Q5T7N3 995 aaPredicted RBP26.89■■□□□ 1.9
PKP3-207ENST00000530695 PTPRKQ15262 1439 aa26.88■■□□□ 1.89
PKP3-207ENST00000530695 ZNF142P52746 1687 aaPredicted RBP26.88■■□□□ 1.89
PKP3-207ENST00000530695 PTPRTO14522 1441 aa26.87■■□□□ 1.89
PKP3-207ENST00000530695 NCOA1Q15788 1441 aa26.87■■□□□ 1.89
PKP3-207ENST00000530695 CAMSAP1Q5T5Y3 1602 aa26.87■■□□□ 1.89
PKP3-207ENST00000530695 KIF3BO15066 747 aa26.85■■□□□ 1.89
PKP3-207ENST00000530695 TSPY4P0CV99 314 aa26.85■■□□□ 1.89
PKP3-207ENST00000530695 TSPY10P0CW01 314 aa26.85■■□□□ 1.89
PKP3-207ENST00000530695 CEP170BQ9Y4F5 1589 aaPredicted RBP26.82■■□□□ 1.88
PKP3-207ENST00000530695 MYOM3Q5VTT5 1437 aa26.81■■□□□ 1.88
PKP3-207ENST00000530695 KDM5DQ9BY66 1539 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms