RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 KHSRPQ92945 711 aaKnown RBP eCLIP10.78□□□□□ -0.689e-10■■■■□ 24.3
C11orf54-208ENST00000530279 VASPP50552 380 aaPredicted RBP10.75□□□□□ -0.69
C11orf54-208ENST00000530279 CIZ1Q9ULV3 898 aaPredicted RBP10.73□□□□□ -0.69
C11orf54-208ENST00000530279 AXIN2Q9Y2T1 843 aa10.7□□□□□ -0.7
C11orf54-208ENST00000530279 POTEEQ6S8J3 1075 aa10.69□□□□□ -0.7
C11orf54-208ENST00000530279 SOX12O15370 315 aa10.67□□□□□ -0.7
C11orf54-208ENST00000530279 NUDT7P0C024 238 aa10.64□□□□□ -0.71
C11orf54-208ENST00000530279 ADGRD1Q6QNK2 874 aa10.64□□□□□ -0.71
C11orf54-208ENST00000530279 MS4A4AQ96JQ5 239 aa10.64□□□□□ -0.71
C11orf54-208ENST00000530279 RGS20O76081 388 aa10.62□□□□□ -0.71
C11orf54-208ENST00000530279 SPOCK2Q92563 424 aa10.62□□□□□ -0.71
C11orf54-208ENST00000530279 IRX2Q9BZI1 471 aaPredicted RBP10.62□□□□□ -0.71
C11orf54-208ENST00000530279 LHX6Q9UPM6 363 aa10.62□□□□□ -0.71
C11orf54-208ENST00000530279 ARHGAP33O14559 1287 aa10.58□□□□□ -0.72
C11orf54-208ENST00000530279 PHF8Q9UPP1 1060 aa10.58□□□□□ -0.72
C11orf54-208ENST00000530279 TK2O00142 265 aa10.55□□□□□ -0.72
C11orf54-208ENST00000530279 KCTD12Q96CX2 325 aaKnown RBP10.54□□□□□ -0.72
C11orf54-208ENST00000530279 HRO43593 1189 aa10.53□□□□□ -0.72
C11orf54-208ENST00000530279 TRIM41Q8WV44 630 aa10.53□□□□□ -0.72
C11orf54-208ENST00000530279 PCDHGA4Q9Y5G9 962 aa10.53□□□□□ -0.72
C11orf54-208ENST00000530279 PSDA5PKW4 1024 aaPredicted RBP10.5□□□□□ -0.73
C11orf54-208ENST00000530279 SLC34A2O95436 690 aa10.5□□□□□ -0.73
C11orf54-208ENST00000530279 STAC3Q96MF2 364 aa10.5□□□□□ -0.73
C11orf54-208ENST00000530279 KIF3CO14782 793 aa10.49□□□□□ -0.73
C11orf54-208ENST00000530279 IFFO2Q5TF58 517 aa10.49□□□□□ -0.73
C11orf54-208ENST00000530279 IFNLR1Q8IU57 520 aaPredicted RBP10.49□□□□□ -0.73
C11orf54-208ENST00000530279 C2orf72A6NCS6 295 aa10.48□□□□□ -0.73
C11orf54-208ENST00000530279 NLRP6P59044 892 aa10.46□□□□□ -0.73
C11orf54-208ENST00000530279 DMRTA1Q5VZB9 504 aa10.46□□□□□ -0.73
C11orf54-208ENST00000530279 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.45□□□□□ -0.74
C11orf54-208ENST00000530279 ZFP91Q96JP5 570 aaPredicted RBP10.45□□□□□ -0.74
C11orf54-208ENST00000530279 PSEN2P49810 448 aa10.44□□□□□ -0.74
C11orf54-208ENST00000530279 PTPN5P54829 565 aa10.43□□□□□ -0.74
C11orf54-208ENST00000530279 A0A0G2JS52 829 aa10.42□□□□□ -0.74
C11orf54-208ENST00000530279 RIOK3O14730 519 aaKnown RBP10.42□□□□□ -0.74
C11orf54-208ENST00000530279 VGFO15240 615 aaPredicted RBP10.39□□□□□ -0.75
C11orf54-208ENST00000530279 FBXO22Q8NEZ5 403 aa10.39□□□□□ -0.75
C11orf54-208ENST00000530279 Q6ZNB5 142 aa10.35□□□□□ -0.75
C11orf54-208ENST00000530279 TMC2Q8TDI7 906 aa10.34□□□□□ -0.75
C11orf54-208ENST00000530279 RNF25Q96BH1 459 aaPredicted RBP10.34□□□□□ -0.75
C11orf54-208ENST00000530279 KDM4FA0A1W2PPD8 638 aa10.33□□□□□ -0.76
C11orf54-208ENST00000530279 PPP4R3BQ5MIZ7 849 aa10.32□□□□□ -0.76
C11orf54-208ENST00000530279 KCNH8Q96L42 1107 aa10.31□□□□□ -0.76
C11orf54-208ENST00000530279 VPS9D1Q9Y2B5 631 aa10.29□□□□□ -0.76
C11orf54-208ENST00000530279 THSD4Q6ZMP0 1018 aa10.28□□□□□ -0.76
C11orf54-208ENST00000530279 KCNK17Q96T54 332 aa10.28□□□□□ -0.76
C11orf54-208ENST00000530279 MFRPQ9BY79 579 aa10.28□□□□□ -0.76
C11orf54-208ENST00000530279 PTCD2Q8WV60 388 aaKnown RBP10.27□□□□□ -0.77
C11orf54-208ENST00000530279 BCL11BQ9C0K0 894 aaPredicted RBP10.25□□□□□ -0.77
C11orf54-208ENST00000530279 GOLGA8CPA6NN73 597 aa10.22□□□□□ -0.77
C11orf54-208ENST00000530279 WNT2BQ93097 391 aa10.21□□□□□ -0.77
C11orf54-208ENST00000530279 STK24Q9Y6E0 443 aa10.21□□□□□ -0.77
C11orf54-208ENST00000530279 SLC4A5Q9BY07 1137 aa10.2□□□□□ -0.78
C11orf54-208ENST00000530279 TAOK2Q9UL54 1235 aa10.2□□□□□ -0.78
C11orf54-208ENST00000530279 BHMG1C9JSJ3 638 aaPredicted RBP10.19□□□□□ -0.78
C11orf54-208ENST00000530279 TBC1D12O60347 775 aa10.18□□□□□ -0.78
C11orf54-208ENST00000530279 LAPTM4AQ15012 233 aa10.15□□□□□ -0.78
C11orf54-208ENST00000530279 MRPL50Q8N5N7 158 aaKnown RBP10.15□□□□□ -0.78
C11orf54-208ENST00000530279 TRAF7Q6Q0C0 670 aa10.13□□□□□ -0.79
C11orf54-208ENST00000530279 ITGBL1O95965 494 aaPredicted RBP10.12□□□□□ -0.79
C11orf54-208ENST00000530279 PLPP6Q8IY26 295 aa10.12□□□□□ -0.79
C11orf54-208ENST00000530279 FOXK1P85037 733 aa10.11□□□□□ -0.79
C11orf54-208ENST00000530279 BCL2L12Q9HB09 334 aa10.11□□□□□ -0.79
C11orf54-208ENST00000530279 STK25O00506 426 aa10.09□□□□□ -0.79
C11orf54-208ENST00000530279 LCE2BO14633 110 aa10.09□□□□□ -0.79
C11orf54-208ENST00000530279 ZNF454Q8N9F8 522 aa10.08□□□□□ -0.8
C11orf54-208ENST00000530279 ZBED2Q9BTP6 218 aa10.08□□□□□ -0.8
C11orf54-208ENST00000530279 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
C11orf54-208ENST00000530279 PTPREP23469 700 aa10.06□□□□□ -0.8
C11orf54-208ENST00000530279 GFRA3O60609 400 aa10.05□□□□□ -0.8
C11orf54-208ENST00000530279 PPP1R37O75864 691 aa10.04□□□□□ -0.8
C11orf54-208ENST00000530279 GPHNQ9NQX3 736 aaPredicted RBP10.02□□□□□ -0.81
C11orf54-208ENST00000530279 KCNC4Q03721 635 aa10□□□□□ -0.81
C11orf54-208ENST00000530279 DSG2Q14126 1118 aa10□□□□□ -0.81
C11orf54-208ENST00000530279 ANKK1Q8NFD2 765 aa9.99□□□□□ -0.81
C11orf54-208ENST00000530279 FOSBP53539 338 aa9.98□□□□□ -0.81
C11orf54-208ENST00000530279 NYAP1Q6ZVC0 841 aa9.97□□□□□ -0.81
C11orf54-208ENST00000530279 ZNF787Q6DD87 383 aa9.96□□□□□ -0.82
C11orf54-208ENST00000530279 OXER1Q8TDS5 423 aa9.96□□□□□ -0.82
C11orf54-208ENST00000530279 NRG2O14511 850 aaPredicted RBP9.93□□□□□ -0.82
C11orf54-208ENST00000530279 BCAMP50895 628 aa9.93□□□□□ -0.82
C11orf54-208ENST00000530279 UPF1Q92900 1129 aaKnown RBP eCLIP9.93□□□□□ -0.82
C11orf54-208ENST00000530279 SOWAHBA6NEL2 793 aa9.91□□□□□ -0.82
C11orf54-208ENST00000530279 RABGEF1Q9UJ41 708 aa9.91□□□□□ -0.82
C11orf54-208ENST00000530279 ZDHHC16Q969W1 377 aa9.9□□□□□ -0.82
C11orf54-208ENST00000530279 ZNF775Q96BV0 537 aaPredicted RBP9.9□□□□□ -0.82
C11orf54-208ENST00000530279 ADAM33Q9BZ11 813 aa9.9□□□□□ -0.82
C11orf54-208ENST00000530279 JPH4Q96JJ6 628 aa9.89□□□□□ -0.83
C11orf54-208ENST00000530279 WBP1LQ9NX94 342 aa9.88□□□□□ -0.83
C11orf54-208ENST00000530279 LAPTM4BQ86VI4 370 aa9.86□□□□□ -0.83
C11orf54-208ENST00000530279 ANO8Q9HCE9 1232 aaPredicted RBP9.86□□□□□ -0.83
C11orf54-208ENST00000530279 PRKD2Q9BZL6 878 aa9.85□□□□□ -0.83
C11orf54-208ENST00000530279 PPP1R3GB7ZBB8 358 aa9.84□□□□□ -0.83
C11orf54-208ENST00000530279 PROX2Q3B8N5 592 aa9.83□□□□□ -0.84
C11orf54-208ENST00000530279 ZFRQ96KR1 1074 aaKnown RBP9.83□□□□□ -0.84
C11orf54-208ENST00000530279 EVI5O60447 810 aa9.79□□□□□ -0.84
C11orf54-208ENST00000530279 ECM2O94769 699 aaPredicted RBP9.79□□□□□ -0.84
C11orf54-208ENST00000530279 V9GY48 417 aaPredicted RBP9.78□□□□□ -0.84
C11orf54-208ENST00000530279 KIAA1468Q9P260 1216 aa9.77□□□□□ -0.85
C11orf54-208ENST00000530279 TSR3Q9UJK0 312 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms