RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 MS4A1P11836 297 aa10.42□□□□□ -0.74
CTNND1-220ENST00000529526 GGT6Q6P531 493 aa10.42□□□□□ -0.74
CTNND1-220ENST00000529526 CHMP4BQ9H444 224 aaKnown RBP10.42□□□□□ -0.74
CTNND1-220ENST00000529526 APBB1O00213 710 aa10.41□□□□□ -0.74
CTNND1-220ENST00000529526 HSCBQ8IWL3 235 aa10.41□□□□□ -0.74
CTNND1-220ENST00000529526 TRHP20396 242 aaPredicted RBP10.4□□□□□ -0.75
CTNND1-220ENST00000529526 GOLGA2Q08379 1002 aa10.39□□□□□ -0.75
CTNND1-220ENST00000529526 ERICH6BQ5W0A0 696 aa10.39□□□□□ -0.75
CTNND1-220ENST00000529526 KTN1Q86UP2 1357 aaKnown RBP10.39□□□□□ -0.75
CTNND1-220ENST00000529526 CCER2I3L3R5 266 aa10.38□□□□□ -0.75
CTNND1-220ENST00000529526 ROCK2O75116 1388 aaKnown RBP10.38□□□□□ -0.75
CTNND1-220ENST00000529526 RTF1Q92541 710 aaKnown RBP10.37□□□□□ -0.75
CTNND1-220ENST00000529526 VPS8Q8N3P4 1428 aa10.37□□□□□ -0.75
CTNND1-220ENST00000529526 CCDC88BA6NC98 1476 aa10.36□□□□□ -0.75
CTNND1-220ENST00000529526 RBM19Q9Y4C8 960 aaKnown RBP10.36□□□□□ -0.75
CTNND1-220ENST00000529526 RAB3GAP2Q9H2M9 1393 aa10.36□□□□□ -0.75
CTNND1-220ENST00000529526 PAK3O75914 559 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-220ENST00000529526 MPHOSPH9Q99550 1183 aa10.36□□□□□ -0.75
CTNND1-220ENST00000529526 GOLGA6L4A6NEF3 574 aa10.35□□□□□ -0.75
CTNND1-220ENST00000529526 GOLGA6L6A8MZA4 724 aa10.35□□□□□ -0.75
CTNND1-220ENST00000529526 HDGFL2Q7Z4V5 671 aaPredicted RBP10.35□□□□□ -0.75
CTNND1-220ENST00000529526 HDGFP51858 240 aaKnown RBP10.34□□□□□ -0.75
CTNND1-220ENST00000529526 ITPRIPQ8IWB1 547 aa10.34□□□□□ -0.75
CTNND1-220ENST00000529526 U2AF1L5P0DN76 240 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-220ENST00000529526 MCCP23508 829 aa10.34□□□□□ -0.75
CTNND1-220ENST00000529526 U2AF1Q01081 240 aaKnown RBP eCLIP10.34□□□□□ -0.752e-10■■□□□ 12.3
CTNND1-220ENST00000529526 TIMELESSQ9UNS1 1208 aa10.34□□□□□ -0.75
CTNND1-220ENST00000529526 NUTM2DQ5VT03 806 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-220ENST00000529526 RCAN3Q9UKA8 241 aa10.34□□□□□ -0.75
CTNND1-220ENST00000529526 DEKP35659 375 aaKnown RBP10.33□□□□□ -0.76
CTNND1-220ENST00000529526 NUP155O75694 1391 aa10.33□□□□□ -0.76
CTNND1-220ENST00000529526 MROH2BQ7Z745 1585 aa10.33□□□□□ -0.76
CTNND1-220ENST00000529526 ZNF330Q9Y3S2 320 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-220ENST00000529526 CCDC146Q8IYE0 955 aa10.32□□□□□ -0.76
CTNND1-220ENST00000529526 DRC7Q8IY82 874 aa10.31□□□□□ -0.76
CTNND1-220ENST00000529526 TDRD9Q8NDG6 1382 aaKnown RBP10.31□□□□□ -0.76
CTNND1-220ENST00000529526 ISY1Q9ULR0 285 aaKnown RBP10.31□□□□□ -0.76
CTNND1-220ENST00000529526 IPO8O15397 1037 aaKnown RBP10.3□□□□□ -0.76
CTNND1-220ENST00000529526 HNRNPMP52272 730 aaKnown RBP eCLIP10.3□□□□□ -0.765e-7■■■■□ 21
CTNND1-220ENST00000529526 GZF1Q9H116 711 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-220ENST00000529526 SLKQ9H2G2 1235 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-220ENST00000529526 CARMIL2Q6F5E8 1435 aa10.29□□□□□ -0.76
CTNND1-220ENST00000529526 MSNP26038 577 aaKnown RBP10.29□□□□□ -0.76
CTNND1-220ENST00000529526 RALBP1Q15311 655 aa10.29□□□□□ -0.76
CTNND1-220ENST00000529526 CLSTN1O94985 981 aa10.29□□□□□ -0.76
CTNND1-220ENST00000529526 CSB-PGBD3P0DP91 1061 aa10.29□□□□□ -0.76
CTNND1-220ENST00000529526 GNL2Q13823 731 aaKnown RBP10.28□□□□□ -0.76
CTNND1-220ENST00000529526 L1TD1Q5T7N2 865 aaKnown RBP10.28□□□□□ -0.76
CTNND1-220ENST00000529526 KIAA1211Q6ZU35 1233 aa10.28□□□□□ -0.76
CTNND1-220ENST00000529526 ANKRD30AQ9BXX3 1397 aa10.28□□□□□ -0.76
CTNND1-220ENST00000529526 MFAP1P55081 439 aaKnown RBP10.27□□□□□ -0.76
CTNND1-220ENST00000529526 RWDD1Q9H446 243 aaPredicted RBP10.27□□□□□ -0.76
CTNND1-220ENST00000529526 NRDCO43847 1150 aa10.27□□□□□ -0.77
CTNND1-220ENST00000529526 KIF3BO15066 747 aa10.27□□□□□ -0.77
CTNND1-220ENST00000529526 L3MBTL2Q969R5 705 aa10.26□□□□□ -0.77
CTNND1-220ENST00000529526 CLUAP1Q96AJ1 413 aa10.26□□□□□ -0.77
CTNND1-220ENST00000529526 FHOD3Q2V2M9 1422 aa10.26□□□□□ -0.77
CTNND1-220ENST00000529526 SMC4Q9NTJ3 1288 aa10.26□□□□□ -0.77
CTNND1-220ENST00000529526 CHAF1AQ13111 956 aaPredicted RBP10.26□□□□□ -0.77
CTNND1-220ENST00000529526 FMN1Q68DA7 1419 aa10.26□□□□□ -0.77
CTNND1-220ENST00000529526 EIF3AQ14152 1382 aaKnown RBP10.25□□□□□ -0.77
CTNND1-220ENST00000529526 EFCAB2Q5VUJ9 269 aa10.25□□□□□ -0.77
CTNND1-220ENST00000529526 FOXD4L1Q9NU39 408 aa10.25□□□□□ -0.77
CTNND1-220ENST00000529526 CHMP3Q9Y3E7 222 aa10.25□□□□□ -0.77
CTNND1-220ENST00000529526 CALD1Q05682 793 aaKnown RBP10.24□□□□□ -0.77
CTNND1-220ENST00000529526 WIZO95785 1651 aa10.24□□□□□ -0.77
CTNND1-220ENST00000529526 NUTM2FA1L443 756 aa10.24□□□□□ -0.77
CTNND1-220ENST00000529526 SLC4A10Q6U841 1118 aa10.24□□□□□ -0.77
CTNND1-220ENST00000529526 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.24□□□□□ -0.772e-8■□□□□ 11.3
CTNND1-220ENST00000529526 NCBP3Q53F19 620 aaKnown RBP10.24□□□□□ -0.77
CTNND1-220ENST00000529526 NOL8Q76FK4 1167 aaKnown RBP10.24□□□□□ -0.77
CTNND1-220ENST00000529526 CFAP44Q96MT7 982 aa10.23□□□□□ -0.77
CTNND1-220ENST00000529526 TRIM6-TRIM34B2RNG4 842 aa10.23□□□□□ -0.77
CTNND1-220ENST00000529526 TCERG1O14776 1098 aaKnown RBP10.23□□□□□ -0.77
CTNND1-220ENST00000529526 GBP4Q96PP9 640 aa10.23□□□□□ -0.77
CTNND1-220ENST00000529526 PMFBP1Q8TBY8 1022 aa10.23□□□□□ -0.77
CTNND1-220ENST00000529526 ARID3AQ99856 593 aa10.23□□□□□ -0.77
CTNND1-220ENST00000529526 RRP7AQ9Y3A4 280 aaKnown RBP10.22□□□□□ -0.77
CTNND1-220ENST00000529526 STK31Q9BXU1 1019 aa10.22□□□□□ -0.77
CTNND1-220ENST00000529526 PDS5BQ9NTI5 1447 aa10.22□□□□□ -0.77
CTNND1-220ENST00000529526 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
CTNND1-220ENST00000529526 SPAG9O60271 1321 aaKnown RBP10.22□□□□□ -0.77
CTNND1-220ENST00000529526 AMER1Q5JTC6 1135 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-220ENST00000529526 LTV1Q96GA3 475 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-220ENST00000529526 HSP90B1P14625 803 aaKnown RBP10.21□□□□□ -0.78
CTNND1-220ENST00000529526 TSHZ2Q9NRE2 1034 aa10.21□□□□□ -0.78
CTNND1-220ENST00000529526 TRAK1Q9UPV9 953 aa10.21□□□□□ -0.78
CTNND1-220ENST00000529526 CENPJQ9HC77 1338 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-220ENST00000529526 TERF2IPQ9NYB0 399 aa10.2□□□□□ -0.78
CTNND1-220ENST00000529526 GORABQ5T7V8 394 aa10.2□□□□□ -0.78
CTNND1-220ENST00000529526 WASHC2CQ9Y4E1 1318 aa10.2□□□□□ -0.78
CTNND1-220ENST00000529526 CCDC9Q9Y3X0 531 aaKnown RBP10.2□□□□□ -0.78
CTNND1-220ENST00000529526 NGDNQ8NEJ9 315 aaKnown RBP10.19□□□□□ -0.78
CTNND1-220ENST00000529526 RAPGEF2Q9Y4G8 1499 aa10.19□□□□□ -0.78
CTNND1-220ENST00000529526 TAF7LQ5H9L4 462 aa10.18□□□□□ -0.78
CTNND1-220ENST00000529526 FOXD4L5Q5VV16 416 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-220ENST00000529526 FOXD4L4Q8WXT5 416 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-220ENST00000529526 AMPHP49418 695 aa10.18□□□□□ -0.78
CTNND1-220ENST00000529526 NLRP13Q86W25 1043 aa10.18□□□□□ -0.78
CTNND1-220ENST00000529526 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms