RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 EFCAB2Q5VUJ9 269 aa19.5■□□□□ 0.71
COPB1-206ENST00000529210 POGZQ7Z3K3 1410 aa19.5■□□□□ 0.71
COPB1-206ENST00000529210 CEP162Q5TB80 1403 aa19.49■□□□□ 0.71
COPB1-206ENST00000529210 SCAPERQ9BY12 1400 aa19.48■□□□□ 0.71
COPB1-206ENST00000529210 CDC42BPBQ9Y5S2 1711 aa19.48■□□□□ 0.71
COPB1-206ENST00000529210 PREX2Q70Z35 1606 aa19.47■□□□□ 0.71
COPB1-206ENST00000529210 ADAMTSL3P82987 1691 aa19.46■□□□□ 0.71
COPB1-206ENST00000529210 ARHGAP5Q13017 1502 aa19.45■□□□□ 0.7
COPB1-206ENST00000529210 BCORL1Q5H9F3 1711 aa19.44■□□□□ 0.7
COPB1-206ENST00000529210 ZFYVE16Q7Z3T8 1539 aa19.44■□□□□ 0.7
COPB1-206ENST00000529210 ZNF518AQ6AHZ1 1483 aa19.43■□□□□ 0.7
COPB1-206ENST00000529210 KDM5CP41229 1560 aa19.43■□□□□ 0.7
COPB1-206ENST00000529210 CDC42BPAQ5VT25 1732 aa19.42■□□□□ 0.7
COPB1-206ENST00000529210 YEATS2Q9ULM3 1422 aa19.41■□□□□ 0.7
COPB1-206ENST00000529210 ABCC1P33527 1531 aa19.4■□□□□ 0.7
COPB1-206ENST00000529210 GPATCH8Q9UKJ3 1502 aaKnown RBP19.36■□□□□ 0.69
COPB1-206ENST00000529210 SIGLEC1Q9BZZ2 1709 aa19.36■□□□□ 0.69
COPB1-206ENST00000529210 ATP10AO60312 1499 aa19.35■□□□□ 0.69
COPB1-206ENST00000529210 ITSN2Q9NZM3 1697 aa19.35■□□□□ 0.69
COPB1-206ENST00000529210 HECW2Q9P2P5 1572 aa19.35■□□□□ 0.69
COPB1-206ENST00000529210 EHBP1L1Q8N3D4 1523 aa19.35■□□□□ 0.69
COPB1-206ENST00000529210 PTPRMP28827 1452 aa19.35■□□□□ 0.69
COPB1-206ENST00000529210 MLH3Q9UHC1 1453 aa19.35■□□□□ 0.69
COPB1-206ENST00000529210 MADDQ8WXG6 1647 aa19.34■□□□□ 0.69
COPB1-206ENST00000529210 ARHGEF12Q9NZN5 1544 aa19.34■□□□□ 0.69
COPB1-206ENST00000529210 C9orf84Q5VXU9 1444 aa19.34■□□□□ 0.69
COPB1-206ENST00000529210 MTUS2Q5JR59 1369 aa19.33■□□□□ 0.69
COPB1-206ENST00000529210 REREQ9P2R6 1566 aa19.33■□□□□ 0.69
COPB1-206ENST00000529210 AFAP1Q8N556 730 aa19.32■□□□□ 0.68
COPB1-206ENST00000529210 ARID4BQ4LE39 1312 aaPredicted RBP19.31■□□□□ 0.68
COPB1-206ENST00000529210 LOC105371045A0A1W2PR82 267 aa19.31■□□□□ 0.68
COPB1-206ENST00000529210 TRAPPC8Q9Y2L5 1435 aa19.31■□□□□ 0.68
COPB1-206ENST00000529210 SAMD9LQ8IVG5 1584 aa19.31■□□□□ 0.68
COPB1-206ENST00000529210 VPS8Q8N3P4 1428 aa19.3■□□□□ 0.68
COPB1-206ENST00000529210 KIAA1107Q9UPP5 1409 aa19.3■□□□□ 0.68
COPB1-206ENST00000529210 DIP2CQ9Y2E4 1556 aa19.29■□□□□ 0.68
COPB1-206ENST00000529210 PLEKHH2Q8IVE3 1493 aa19.28■□□□□ 0.68
COPB1-206ENST00000529210 CCNB3Q8WWL7 1395 aa19.28■□□□□ 0.68
COPB1-206ENST00000529210 TIAM1Q13009 1591 aa19.27■□□□□ 0.68
COPB1-206ENST00000529210 ABCA6Q8N139 1617 aa19.26■□□□□ 0.67
COPB1-206ENST00000529210 KIDINS220Q9ULH0 1771 aa19.26■□□□□ 0.67
COPB1-206ENST00000529210 RIMS1Q86UR5 1692 aaKnown RBP19.25■□□□□ 0.67
COPB1-206ENST00000529210 AGLP35573 1532 aa19.25■□□□□ 0.67
COPB1-206ENST00000529210 MAP3K1Q13233 1512 aa19.25■□□□□ 0.67
COPB1-206ENST00000529210 SYCP2Q9BX26 1530 aa19.25■□□□□ 0.67
COPB1-206ENST00000529210 CFDP1Q9UEE9 299 aaPredicted RBP19.24■□□□□ 0.67
COPB1-206ENST00000529210 SUPT6HQ7KZ85 1726 aaKnown RBP19.22■□□□□ 0.67
COPB1-206ENST00000529210 FER1L4A9Z1Z3 1794 aa19.22■□□□□ 0.67
COPB1-206ENST00000529210 NCOA2Q15596 1464 aa19.19■□□□□ 0.66
COPB1-206ENST00000529210 INO80Q9ULG1 1556 aaPredicted RBP19.19■□□□□ 0.66
COPB1-206ENST00000529210 LRRC9Q6ZRR7 1453 aa19.18■□□□□ 0.66
COPB1-206ENST00000529210 MBD5Q9P267 1494 aa19.18■□□□□ 0.66
COPB1-206ENST00000529210 ZNF777Q9ULD5 760 aaPredicted RBP19.18■□□□□ 0.66
COPB1-206ENST00000529210 ATP7AQ04656 1500 aa19.16■□□□□ 0.66
COPB1-206ENST00000529210 HNRNPMP52272 730 aaKnown RBP eCLIP19.16■□□□□ 0.66
COPB1-206ENST00000529210 SPAG9O60271 1321 aaKnown RBP19.15■□□□□ 0.66
COPB1-206ENST00000529210 MLECQ14165 292 aa19.14■□□□□ 0.65
COPB1-206ENST00000529210 MYT1LQ9UL68 1186 aa19.14■□□□□ 0.65
COPB1-206ENST00000529210 LMTK3Q96Q04 1460 aa19.14■□□□□ 0.65
COPB1-206ENST00000529210 PLXNC1O60486 1568 aa19.14■□□□□ 0.65
COPB1-206ENST00000529210 RTEL1-TNFRSF6BF6WH68 1400 aa19.13■□□□□ 0.65
COPB1-206ENST00000529210 ZNF644Q9H582 1327 aaPredicted RBP19.11■□□□□ 0.65
COPB1-206ENST00000529210 RSPH4AQ5TD94 716 aa19.1■□□□□ 0.65
COPB1-206ENST00000529210 CAMSAP2Q08AD1 1489 aa19.09■□□□□ 0.65
COPB1-206ENST00000529210 ADGBQ8N7X0 1667 aa19.09■□□□□ 0.65
COPB1-206ENST00000529210 ARHGEF5Q12774 1597 aa19.09■□□□□ 0.65
COPB1-206ENST00000529210 A2MP01023 1474 aa19.09■□□□□ 0.65
COPB1-206ENST00000529210 CCDC141Q6ZP82 1450 aa19.08■□□□□ 0.64
COPB1-206ENST00000529210 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.64
COPB1-206ENST00000529210 MIA2Q96PC5 1412 aa19.06■□□□□ 0.64
COPB1-206ENST00000529210 SETD1BQ9UPS6 1966 aaKnown RBP19.06■□□□□ 0.64
COPB1-206ENST00000529210 KANK4Q5T7N3 995 aaPredicted RBP19.05■□□□□ 0.64
COPB1-206ENST00000529210 MROH2AA6NES4 1674 aa19.05■□□□□ 0.64
COPB1-206ENST00000529210 PREX1Q8TCU6 1659 aa19.05■□□□□ 0.64
COPB1-206ENST00000529210 C3P01024 1663 aa19.04■□□□□ 0.64
COPB1-206ENST00000529210 MYOM3Q5VTT5 1437 aa19.03■□□□□ 0.64
COPB1-206ENST00000529210 PPP6R1Q9UPN7 881 aa19.01■□□□□ 0.63
COPB1-206ENST00000529210 DHX29Q7Z478 1369 aaKnown RBP19■□□□□ 0.63
COPB1-206ENST00000529210 MAST1Q9Y2H9 1570 aa18.99■□□□□ 0.63
COPB1-206ENST00000529210 CEBPAP49715 358 aaPredicted RBP18.99■□□□□ 0.63
COPB1-206ENST00000529210 ESF1Q9H501 851 aaKnown RBP18.98■□□□□ 0.63
COPB1-206ENST00000529210 FAM135AQ9P2D6 1515 aa18.97■□□□□ 0.63
COPB1-206ENST00000529210 APLP2Q06481 763 aa18.96■□□□□ 0.63
COPB1-206ENST00000529210 NPATQ14207 1427 aa18.96■□□□□ 0.63
COPB1-206ENST00000529210 UHRF1BP1Q6BDS2 1440 aa18.96■□□□□ 0.63
COPB1-206ENST00000529210 ZMYM3Q14202 1370 aa18.94■□□□□ 0.62
COPB1-206ENST00000529210 TSPY4P0CV99 314 aa18.94■□□□□ 0.62
COPB1-206ENST00000529210 TSPY10P0CW01 314 aa18.94■□□□□ 0.62
COPB1-206ENST00000529210 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
COPB1-206ENST00000529210 CLTCQ00610 1675 aaKnown RBP18.93■□□□□ 0.62
COPB1-206ENST00000529210 HSPA2P54652 639 aa18.92■□□□□ 0.62
COPB1-206ENST00000529210 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
COPB1-206ENST00000529210 PTPN23Q9H3S7 1636 aa18.9■□□□□ 0.62
COPB1-206ENST00000529210 SHANK2Q9UPX8 1470 aa18.9■□□□□ 0.62
COPB1-206ENST00000529210 GGT6Q6P531 493 aa18.89■□□□□ 0.61
COPB1-206ENST00000529210 PTPRKQ15262 1439 aa18.88■□□□□ 0.61
COPB1-206ENST00000529210 FGD6Q6ZV73 1430 aa18.88■□□□□ 0.61
COPB1-206ENST00000529210 EIF2AK4Q9P2K8 1649 aaKnown RBP18.88■□□□□ 0.61
COPB1-206ENST00000529210 CROCC2H7BZ55 1655 aa18.87■□□□□ 0.61
COPB1-206ENST00000529210 RNF17Q9BXT8 1623 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms