RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 POGZQ7Z3K3 1410 aa18.84■□□□□ 0.61
SRPRA-203ENST00000528744 PLPPR3Q6T4P5 718 aa18.83■□□□□ 0.6
SRPRA-203ENST00000528744 LRRIQ1Q96JM4 1722 aa18.83■□□□□ 0.6
SRPRA-203ENST00000528744 SIGLEC1Q9BZZ2 1709 aa18.83■□□□□ 0.6
SRPRA-203ENST00000528744 ZMYM4Q5VZL5 1548 aa18.82■□□□□ 0.6
SRPRA-203ENST00000528744 ARHGEF40Q8TER5 1519 aa18.82■□□□□ 0.6
SRPRA-203ENST00000528744 BCORL1Q5H9F3 1711 aa18.82■□□□□ 0.6
SRPRA-203ENST00000528744 CLIP1P30622 1438 aa18.81■□□□□ 0.6
SRPRA-203ENST00000528744 MAGI2Q86UL8 1455 aa18.8■□□□□ 0.6
SRPRA-203ENST00000528744 MADDQ8WXG6 1647 aa18.8■□□□□ 0.6
SRPRA-203ENST00000528744 ZFYVE16Q7Z3T8 1539 aa18.79■□□□□ 0.6
SRPRA-203ENST00000528744 PCF11O94913 1555 aaKnown RBP18.78■□□□□ 0.6
SRPRA-203ENST00000528744 CFAP74Q9C0B2 1584 aa18.78■□□□□ 0.6
SRPRA-203ENST00000528744 FOXD1Q16676 465 aa18.78■□□□□ 0.6
SRPRA-203ENST00000528744 ARHGEF12Q9NZN5 1544 aa18.78■□□□□ 0.6
SRPRA-203ENST00000528744 ATP10AO60312 1499 aa18.77■□□□□ 0.59
SRPRA-203ENST00000528744 TRAPPC8Q9Y2L5 1435 aa18.76■□□□□ 0.59
SRPRA-203ENST00000528744 ARHGAP5Q13017 1502 aa18.75■□□□□ 0.59
SRPRA-203ENST00000528744 CEBPAP49715 358 aaPredicted RBP18.75■□□□□ 0.59
SRPRA-203ENST00000528744 HSPA2P54652 639 aa18.75■□□□□ 0.59
SRPRA-203ENST00000528744 CCDC18Q5T9S5 1454 aa18.72■□□□□ 0.59
SRPRA-203ENST00000528744 LMTK3Q96Q04 1460 aa18.71■□□□□ 0.59
SRPRA-203ENST00000528744 LOC105371045A0A1W2PR82 267 aa18.71■□□□□ 0.59
SRPRA-203ENST00000528744 MYT1LQ9UL68 1186 aa18.71■□□□□ 0.59
SRPRA-203ENST00000528744 ZNF777Q9ULD5 760 aaPredicted RBP18.71■□□□□ 0.59
SRPRA-203ENST00000528744 MYO5CQ9NQX4 1742 aa18.71■□□□□ 0.59
SRPRA-203ENST00000528744 HNRNPMP52272 730 aaKnown RBP eCLIP18.7■□□□□ 0.58
SRPRA-203ENST00000528744 C9orf84Q5VXU9 1444 aa18.7■□□□□ 0.58
SRPRA-203ENST00000528744 ZNF518AQ6AHZ1 1483 aa18.7■□□□□ 0.58
SRPRA-203ENST00000528744 FYCO1Q9BQS8 1478 aa18.7■□□□□ 0.58
SRPRA-203ENST00000528744 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
SRPRA-203ENST00000528744 CDC42BPBQ9Y5S2 1711 aa18.69■□□□□ 0.58
SRPRA-203ENST00000528744 GPATCH8Q9UKJ3 1502 aaKnown RBP18.69■□□□□ 0.58
SRPRA-203ENST00000528744 KDM5CP41229 1560 aa18.68■□□□□ 0.58
SRPRA-203ENST00000528744 MLH3Q9UHC1 1453 aa18.66■□□□□ 0.58
SRPRA-203ENST00000528744 ZNF644Q9H582 1327 aaPredicted RBP18.65■□□□□ 0.58
SRPRA-203ENST00000528744 CFDP1Q9UEE9 299 aaPredicted RBP18.63■□□□□ 0.57
SRPRA-203ENST00000528744 ABCC1P33527 1531 aa18.63■□□□□ 0.57
SRPRA-203ENST00000528744 DIP2CQ9Y2E4 1556 aa18.62■□□□□ 0.57
SRPRA-203ENST00000528744 PREX2Q70Z35 1606 aa18.61■□□□□ 0.57
SRPRA-203ENST00000528744 CEP162Q5TB80 1403 aa18.61■□□□□ 0.57
SRPRA-203ENST00000528744 MTUS2Q5JR59 1369 aa18.58■□□□□ 0.57
SRPRA-203ENST00000528744 CCNB3Q8WWL7 1395 aa18.58■□□□□ 0.57
SRPRA-203ENST00000528744 CDC42BPAQ5VT25 1732 aa18.58■□□□□ 0.57
SRPRA-203ENST00000528744 ABCA6Q8N139 1617 aa18.58■□□□□ 0.56
SRPRA-203ENST00000528744 SAMD9LQ8IVG5 1584 aa18.58■□□□□ 0.56
SRPRA-203ENST00000528744 SPAG9O60271 1321 aaKnown RBP18.57■□□□□ 0.56
SRPRA-203ENST00000528744 KIAA1107Q9UPP5 1409 aa18.55■□□□□ 0.56
SRPRA-203ENST00000528744 KIDINS220Q9ULH0 1771 aa18.55■□□□□ 0.56
SRPRA-203ENST00000528744 AGLP35573 1532 aa18.54■□□□□ 0.56
SRPRA-203ENST00000528744 SYCP2Q9BX26 1530 aa18.54■□□□□ 0.56
SRPRA-203ENST00000528744 ITSN2Q9NZM3 1697 aa18.54■□□□□ 0.56
SRPRA-203ENST00000528744 FER1L4A9Z1Z3 1794 aa18.53■□□□□ 0.56
SRPRA-203ENST00000528744 FBXO41Q8TF61 875 aa18.53■□□□□ 0.56
SRPRA-203ENST00000528744 REREQ9P2R6 1566 aa18.53■□□□□ 0.56
SRPRA-203ENST00000528744 MBD5Q9P267 1494 aa18.51■□□□□ 0.55
SRPRA-203ENST00000528744 KANK4Q5T7N3 995 aaPredicted RBP18.48■□□□□ 0.55
SRPRA-203ENST00000528744 ESF1Q9H501 851 aaKnown RBP18.47■□□□□ 0.55
SRPRA-203ENST00000528744 ZMYM3Q14202 1370 aa18.46■□□□□ 0.55
SRPRA-203ENST00000528744 GGT6Q6P531 493 aa18.46■□□□□ 0.55
SRPRA-203ENST00000528744 TIAM1Q13009 1591 aa18.46■□□□□ 0.55
SRPRA-203ENST00000528744 PLEKHH2Q8IVE3 1493 aa18.46■□□□□ 0.54
SRPRA-203ENST00000528744 A2MP01023 1474 aa18.44■□□□□ 0.54
SRPRA-203ENST00000528744 NCOA2Q15596 1464 aa18.44■□□□□ 0.54
SRPRA-203ENST00000528744 CERKQ8TCT0 537 aa18.43■□□□□ 0.54
SRPRA-203ENST00000528744 ATP7AQ04656 1500 aa18.43■□□□□ 0.54
SRPRA-203ENST00000528744 EHBP1L1Q8N3D4 1523 aa18.43■□□□□ 0.54
SRPRA-203ENST00000528744 UHRF1BP1Q6BDS2 1440 aa18.42■□□□□ 0.54
SRPRA-203ENST00000528744 C3P01024 1663 aa18.4■□□□□ 0.54
SRPRA-203ENST00000528744 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
SRPRA-203ENST00000528744 CNTLNQ9NXG0 1405 aa18.4■□□□□ 0.54
SRPRA-203ENST00000528744 DHX29Q7Z478 1369 aaKnown RBP18.39■□□□□ 0.53
SRPRA-203ENST00000528744 SETD1BQ9UPS6 1966 aaKnown RBP18.39■□□□□ 0.53
SRPRA-203ENST00000528744 INO80Q9ULG1 1556 aaPredicted RBP18.38■□□□□ 0.53
SRPRA-203ENST00000528744 PLXNC1O60486 1568 aa18.38■□□□□ 0.53
SRPRA-203ENST00000528744 RTEL1-TNFRSF6BF6WH68 1400 aa18.37■□□□□ 0.53
SRPRA-203ENST00000528744 LRRC9Q6ZRR7 1453 aa18.36■□□□□ 0.53
SRPRA-203ENST00000528744 SUPT6HQ7KZ85 1726 aaKnown RBP18.36■□□□□ 0.53
SRPRA-203ENST00000528744 STRCQ7RTU9 1775 aa18.36■□□□□ 0.53
SRPRA-203ENST00000528744 PREX1Q8TCU6 1659 aa18.36■□□□□ 0.53
SRPRA-203ENST00000528744 KIF3BO15066 747 aa18.35■□□□□ 0.53
SRPRA-203ENST00000528744 PTPRKQ15262 1439 aa18.34■□□□□ 0.53
SRPRA-203ENST00000528744 NCKAP5LQ9HCH0 1330 aa18.34■□□□□ 0.53
SRPRA-203ENST00000528744 RSPH4AQ5TD94 716 aa18.34■□□□□ 0.53
SRPRA-203ENST00000528744 FBXO31Q5XUX0 539 aaPredicted RBP18.34■□□□□ 0.53
SRPRA-203ENST00000528744 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
SRPRA-203ENST00000528744 CAMSAP2Q08AD1 1489 aa18.33■□□□□ 0.53
SRPRA-203ENST00000528744 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
SRPRA-203ENST00000528744 NPATQ14207 1427 aa18.32■□□□□ 0.52
SRPRA-203ENST00000528744 CCDC141Q6ZP82 1450 aa18.31■□□□□ 0.52
SRPRA-203ENST00000528744 PTPRTO14522 1441 aa18.3■□□□□ 0.52
SRPRA-203ENST00000528744 NCOA1Q15788 1441 aa18.3■□□□□ 0.52
SRPRA-203ENST00000528744 TSPY4P0CV99 314 aa18.29■□□□□ 0.52
SRPRA-203ENST00000528744 TSPY10P0CW01 314 aa18.29■□□□□ 0.52
SRPRA-203ENST00000528744 CLTCQ00610 1675 aaKnown RBP18.27■□□□□ 0.52
SRPRA-203ENST00000528744 MAP3K1Q13233 1512 aa18.24■□□□□ 0.51
SRPRA-203ENST00000528744 WASHC2CQ9Y4E1 1318 aa18.23■□□□□ 0.51
SRPRA-203ENST00000528744 CAMSAP1Q5T5Y3 1602 aa18.23■□□□□ 0.51
SRPRA-203ENST00000528744 MROH2AA6NES4 1674 aa18.23■□□□□ 0.51
SRPRA-203ENST00000528744 ADGBQ8N7X0 1667 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms