RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 MBD5Q9P267 1494 aa12.63□□□□□ -0.39
SORL1-207ENST00000528339 REREQ9P2R6 1566 aa12.63□□□□□ -0.39
SORL1-207ENST00000528339 FGD6Q6ZV73 1430 aa12.6□□□□□ -0.39
SORL1-207ENST00000528339 KANK4Q5T7N3 995 aaPredicted RBP12.6□□□□□ -0.39
SORL1-207ENST00000528339 SIGLEC1Q9BZZ2 1709 aa12.6□□□□□ -0.39
SORL1-207ENST00000528339 EIF2AK4Q9P2K8 1649 aaKnown RBP12.6□□□□□ -0.39
SORL1-207ENST00000528339 ASXL2Q76L83 1435 aa12.6□□□□□ -0.39
SORL1-207ENST00000528339 KIDINS220Q9ULH0 1771 aa12.59□□□□□ -0.39
SORL1-207ENST00000528339 ARHGEF12Q9NZN5 1544 aa12.59□□□□□ -0.39
SORL1-207ENST00000528339 MAGI2Q86UL8 1455 aa12.58□□□□□ -0.4
SORL1-207ENST00000528339 UNC13BO14795 1591 aa12.58□□□□□ -0.4
SORL1-207ENST00000528339 KDM5DQ9BY66 1539 aa12.57□□□□□ -0.4
SORL1-207ENST00000528339 PLCH2O75038 1416 aa12.57□□□□□ -0.4
SORL1-207ENST00000528339 CAMSAP2Q08AD1 1489 aa12.57□□□□□ -0.4
SORL1-207ENST00000528339 RNF17Q9BXT8 1623 aaKnown RBP12.57□□□□□ -0.4
SORL1-207ENST00000528339 KIAA1107Q9UPP5 1409 aa12.57□□□□□ -0.4
SORL1-207ENST00000528339 ZFYVE16Q7Z3T8 1539 aa12.56□□□□□ -0.4
SORL1-207ENST00000528339 VWDEQ8N2E2 1590 aa12.56□□□□□ -0.4
SORL1-207ENST00000528339 MROH1Q8NDA8 1641 aa12.55□□□□□ -0.4
SORL1-207ENST00000528339 PTPRKQ15262 1439 aa12.53□□□□□ -0.4
SORL1-207ENST00000528339 KDM6BO15054 1643 aa12.53□□□□□ -0.4
SORL1-207ENST00000528339 NEO1Q92859 1461 aa12.53□□□□□ -0.4
SORL1-207ENST00000528339 ABCA6Q8N139 1617 aa12.51□□□□□ -0.41
SORL1-207ENST00000528339 FBLN2P98095 1184 aa12.5□□□□□ -0.41
SORL1-207ENST00000528339 DENND4BO75064 1496 aaPredicted RBP12.49□□□□□ -0.41
SORL1-207ENST00000528339 SYCP2Q9BX26 1530 aa12.49□□□□□ -0.41
SORL1-207ENST00000528339 ROCK1Q13464 1354 aa12.48□□□□□ -0.41
SORL1-207ENST00000528339 HECW2Q9P2P5 1572 aa12.48□□□□□ -0.41
SORL1-207ENST00000528339 PLEKHH2Q8IVE3 1493 aa12.48□□□□□ -0.41
SORL1-207ENST00000528339 IQGAP3Q86VI3 1631 aa12.47□□□□□ -0.41
SORL1-207ENST00000528339 ABCC5O15440 1437 aa12.47□□□□□ -0.41
SORL1-207ENST00000528339 DAPK1P53355 1430 aa12.47□□□□□ -0.41
SORL1-207ENST00000528339 DIP2CQ9Y2E4 1556 aa12.46□□□□□ -0.41
SORL1-207ENST00000528339 DNAJC5Q9H3Z4 198 aa12.46□□□□□ -0.42
SORL1-207ENST00000528339 RTEL1-TNFRSF6BF6WH68 1400 aa12.45□□□□□ -0.42
SORL1-207ENST00000528339 FAM135AQ9P2D6 1515 aa12.45□□□□□ -0.42
SORL1-207ENST00000528339 CCNB3Q8WWL7 1395 aa12.45□□□□□ -0.42
SORL1-207ENST00000528339 ZC3H13Q5T200 1668 aaKnown RBP12.45□□□□□ -0.42
SORL1-207ENST00000528339 HFM1A2PYH4 1435 aa12.44□□□□□ -0.42
SORL1-207ENST00000528339 PRDM15P57071 1507 aaPredicted RBP12.44□□□□□ -0.42
SORL1-207ENST00000528339 P3H3Q8IVL6 736 aa12.44□□□□□ -0.42
SORL1-207ENST00000528339 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
SORL1-207ENST00000528339 ARHGEF40Q8TER5 1519 aa12.43□□□□□ -0.42
SORL1-207ENST00000528339 NEURL4Q96JN8 1562 aa12.42□□□□□ -0.42
SORL1-207ENST00000528339 POGZQ7Z3K3 1410 aa12.42□□□□□ -0.42
SORL1-207ENST00000528339 CCDC141Q6ZP82 1450 aa12.41□□□□□ -0.42
SORL1-207ENST00000528339 MTUS2Q5JR59 1369 aa12.4□□□□□ -0.42
SORL1-207ENST00000528339 ATP7AQ04656 1500 aa12.4□□□□□ -0.42
SORL1-207ENST00000528339 LMTK2Q8IWU2 1503 aa12.4□□□□□ -0.42
SORL1-207ENST00000528339 FANCAO15360 1455 aa12.39□□□□□ -0.43
SORL1-207ENST00000528339 ARHGAP5Q13017 1502 aa12.39□□□□□ -0.43
SORL1-207ENST00000528339 MROH2AA6NES4 1674 aa12.39□□□□□ -0.43
SORL1-207ENST00000528339 AGLP35573 1532 aa12.39□□□□□ -0.43
SORL1-207ENST00000528339 NAIPQ13075 1403 aa12.39□□□□□ -0.43
SORL1-207ENST00000528339 TSPOAP1O95153 1857 aa12.38□□□□□ -0.43
SORL1-207ENST00000528339 DUOX2Q9NRD8 1548 aa12.37□□□□□ -0.43
SORL1-207ENST00000528339 IFT172Q9UG01 1749 aa12.36□□□□□ -0.43
SORL1-207ENST00000528339 NCOA1Q15788 1441 aa12.36□□□□□ -0.43
SORL1-207ENST00000528339 PIK3C2BO00750 1634 aa12.35□□□□□ -0.43
SORL1-207ENST00000528339 TET3O43151 1660 aa12.35□□□□□ -0.43
SORL1-207ENST00000528339 ZNF518AQ6AHZ1 1483 aa12.35□□□□□ -0.43
SORL1-207ENST00000528339 TEX14Q8IWB6 1497 aa12.35□□□□□ -0.43
SORL1-207ENST00000528339 HRCP23327 699 aa12.34□□□□□ -0.43
SORL1-207ENST00000528339 EHMT2Q96KQ7 1210 aa12.34□□□□□ -0.43
SORL1-207ENST00000528339 COL17A1Q9UMD9 1497 aaPredicted RBP12.34□□□□□ -0.43
SORL1-207ENST00000528339 ERBINQ96RT1 1412 aa12.34□□□□□ -0.43
SORL1-207ENST00000528339 TRAPPC8Q9Y2L5 1435 aa12.33□□□□□ -0.44
SORL1-207ENST00000528339 E9PCH4 1651 aa12.33□□□□□ -0.44
SORL1-207ENST00000528339 KDM5AP29375 1690 aaKnown RBP12.33□□□□□ -0.44
SORL1-207ENST00000528339 CD109Q6YHK3 1445 aa12.32□□□□□ -0.44
SORL1-207ENST00000528339 CEP152O94986 1710 aa12.31□□□□□ -0.44
SORL1-207ENST00000528339 ADGRL1O94910 1474 aa12.3□□□□□ -0.44
SORL1-207ENST00000528339 PZPP20742 1482 aa12.3□□□□□ -0.44
SORL1-207ENST00000528339 TRIM26Q12899 539 aaPredicted RBP12.3□□□□□ -0.44
SORL1-207ENST00000528339 ATP10AO60312 1499 aa12.3□□□□□ -0.44
SORL1-207ENST00000528339 C9orf84Q5VXU9 1444 aa12.29□□□□□ -0.44
SORL1-207ENST00000528339 CAMSAP1Q5T5Y3 1602 aa12.29□□□□□ -0.44
SORL1-207ENST00000528339 SPHKAPQ2M3C7 1700 aa12.29□□□□□ -0.44
SORL1-207ENST00000528339 CDK11AQ9UQ88 783 aaPredicted RBP12.28□□□□□ -0.44
SORL1-207ENST00000528339 PLEKHD1A6NEE1 506 aa12.27□□□□□ -0.45
SORL1-207ENST00000528339 ADAMTSL3P82987 1691 aa12.27□□□□□ -0.45
SORL1-207ENST00000528339 EFCAB6Q5THR3 1501 aa12.25□□□□□ -0.45
SORL1-207ENST00000528339 ZNF644Q9H582 1327 aaPredicted RBP12.22□□□□□ -0.45
SORL1-207ENST00000528339 PREX1Q8TCU6 1659 aa12.22□□□□□ -0.45
SORL1-207ENST00000528339 SETD5Q9C0A6 1442 aa12.21□□□□□ -0.45
SORL1-207ENST00000528339 RSPH4AQ5TD94 716 aa12.21□□□□□ -0.45
SORL1-207ENST00000528339 RANGAP1P46060 587 aaPredicted RBP12.21□□□□□ -0.46
SORL1-207ENST00000528339 ZNF142P52746 1687 aaPredicted RBP12.2□□□□□ -0.46
SORL1-207ENST00000528339 ABCC3O15438 1527 aa12.19□□□□□ -0.46
SORL1-207ENST00000528339 TRPM2O94759 1503 aa12.19□□□□□ -0.46
SORL1-207ENST00000528339 SETD1AO15047 1707 aaKnown RBP12.18□□□□□ -0.46
SORL1-207ENST00000528339 SCAPERQ9BY12 1400 aa12.18□□□□□ -0.46
SORL1-207ENST00000528339 SYNMO15061 1565 aa12.18□□□□□ -0.46
SORL1-207ENST00000528339 PTPRTO14522 1441 aa12.17□□□□□ -0.46
SORL1-207ENST00000528339 DHX57Q6P158 1386 aaKnown RBP12.17□□□□□ -0.46
SORL1-207ENST00000528339 SPATA31D1Q6ZQQ2 1576 aa12.17□□□□□ -0.46
SORL1-207ENST00000528339 CYB5RLQ6IPT4 315 aa12.16□□□□□ -0.46
SORL1-207ENST00000528339 ARHGAP31Q2M1Z3 1444 aa12.16□□□□□ -0.46
SORL1-207ENST00000528339 LAMC1P11047 1609 aa12.16□□□□□ -0.46
SORL1-207ENST00000528339 C3P01024 1663 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms