RNA–Protein interactions for RNA: ENST00000528281.5

CNKSR1-212, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-212ENST00000528281 ARHGAP5Q13017 1502 aa28.69■■■□□ 2.18
CNKSR1-212ENST00000528281 MAGI2Q86UL8 1455 aa28.68■■■□□ 2.18
CNKSR1-212ENST00000528281 CDC42BPBQ9Y5S2 1711 aa28.67■■■□□ 2.18
CNKSR1-212ENST00000528281 CEP162Q5TB80 1403 aa28.67■■■□□ 2.18
CNKSR1-212ENST00000528281 ZFYVE16Q7Z3T8 1539 aa28.65■■■□□ 2.18
CNKSR1-212ENST00000528281 ADAMTSL3P82987 1691 aa28.65■■■□□ 2.18
CNKSR1-212ENST00000528281 PREX2Q70Z35 1606 aa28.65■■■□□ 2.18
CNKSR1-212ENST00000528281 BCORL1Q5H9F3 1711 aa28.64■■■□□ 2.18
CNKSR1-212ENST00000528281 ARID4BQ4LE39 1312 aaPredicted RBP28.62■■■□□ 2.17
CNKSR1-212ENST00000528281 YEATS2Q9ULM3 1422 aa28.6■■■□□ 2.17
CNKSR1-212ENST00000528281 CDC42BPAQ5VT25 1732 aa28.6■■■□□ 2.17
CNKSR1-212ENST00000528281 ZNF518AQ6AHZ1 1483 aa28.59■■■□□ 2.17
CNKSR1-212ENST00000528281 KDM5CP41229 1560 aa28.54■■■□□ 2.16
CNKSR1-212ENST00000528281 MADDQ8WXG6 1647 aa28.53■■■□□ 2.16
CNKSR1-212ENST00000528281 PTPRMP28827 1452 aa28.53■■■□□ 2.16
CNKSR1-212ENST00000528281 SIGLEC1Q9BZZ2 1709 aa28.52■■■□□ 2.16
CNKSR1-212ENST00000528281 ABCC1P33527 1531 aa28.52■■■□□ 2.16
CNKSR1-212ENST00000528281 LOC105371045A0A1W2PR82 267 aa28.51■■■□□ 2.15
CNKSR1-212ENST00000528281 AFAP1Q8N556 730 aa28.51■■■□□ 2.15
CNKSR1-212ENST00000528281 ATP10AO60312 1499 aa28.51■■■□□ 2.15
CNKSR1-212ENST00000528281 MTUS2Q5JR59 1369 aa28.5■■■□□ 2.15
CNKSR1-212ENST00000528281 ITSN2Q9NZM3 1697 aa28.5■■■□□ 2.15
CNKSR1-212ENST00000528281 HECW2Q9P2P5 1572 aa28.49■■■□□ 2.15
CNKSR1-212ENST00000528281 GPATCH8Q9UKJ3 1502 aaKnown RBP28.48■■■□□ 2.15
CNKSR1-212ENST00000528281 C9orf84Q5VXU9 1444 aa28.47■■■□□ 2.15
CNKSR1-212ENST00000528281 ARHGEF12Q9NZN5 1544 aa28.47■■■□□ 2.15
CNKSR1-212ENST00000528281 EHBP1L1Q8N3D4 1523 aa28.44■■■□□ 2.14
CNKSR1-212ENST00000528281 MLH3Q9UHC1 1453 aa28.44■■■□□ 2.14
CNKSR1-212ENST00000528281 RIMS1Q86UR5 1692 aaKnown RBP28.44■■■□□ 2.14
CNKSR1-212ENST00000528281 TRAPPC8Q9Y2L5 1435 aa28.43■■■□□ 2.14
CNKSR1-212ENST00000528281 SAMD9LQ8IVG5 1584 aa28.43■■■□□ 2.14
CNKSR1-212ENST00000528281 CCNB3Q8WWL7 1395 aa28.42■■■□□ 2.14
CNKSR1-212ENST00000528281 MYT1LQ9UL68 1186 aa28.41■■■□□ 2.14
CNKSR1-212ENST00000528281 ZNF777Q9ULD5 760 aaPredicted RBP28.4■■■□□ 2.14
CNKSR1-212ENST00000528281 DIP2CQ9Y2E4 1556 aa28.4■■■□□ 2.14
CNKSR1-212ENST00000528281 CFDP1Q9UEE9 299 aaPredicted RBP28.38■■■□□ 2.13
CNKSR1-212ENST00000528281 REREQ9P2R6 1566 aa28.37■■■□□ 2.13
CNKSR1-212ENST00000528281 ABCA6Q8N139 1617 aa28.37■■■□□ 2.13
CNKSR1-212ENST00000528281 FER1L4A9Z1Z3 1794 aa28.37■■■□□ 2.13
CNKSR1-212ENST00000528281 VPS8Q8N3P4 1428 aa28.36■■■□□ 2.13
CNKSR1-212ENST00000528281 PLEKHH2Q8IVE3 1493 aa28.36■■■□□ 2.13
CNKSR1-212ENST00000528281 MLECQ14165 292 aa28.36■■■□□ 2.13
CNKSR1-212ENST00000528281 SYCP2Q9BX26 1530 aa28.36■■■□□ 2.13
CNKSR1-212ENST00000528281 TIAM1Q13009 1591 aa28.35■■■□□ 2.13
CNKSR1-212ENST00000528281 KIAA1107Q9UPP5 1409 aa28.35■■■□□ 2.13
CNKSR1-212ENST00000528281 KIDINS220Q9ULH0 1771 aa28.34■■■□□ 2.13
CNKSR1-212ENST00000528281 SUPT6HQ7KZ85 1726 aaKnown RBP28.3■■■□□ 2.12
CNKSR1-212ENST00000528281 HNRNPMP52272 730 aaKnown RBP eCLIP28.3■■■□□ 2.12
CNKSR1-212ENST00000528281 AGLP35573 1532 aa28.27■■■□□ 2.12
CNKSR1-212ENST00000528281 SPAG9O60271 1321 aaKnown RBP28.25■■■□□ 2.11
CNKSR1-212ENST00000528281 NCOA2Q15596 1464 aa28.25■■■□□ 2.11
CNKSR1-212ENST00000528281 ATP7AQ04656 1500 aa28.22■■■□□ 2.11
CNKSR1-212ENST00000528281 INO80Q9ULG1 1556 aaPredicted RBP28.21■■■□□ 2.11
CNKSR1-212ENST00000528281 MAP3K1Q13233 1512 aa28.21■■■□□ 2.11
CNKSR1-212ENST00000528281 LRRC9Q6ZRR7 1453 aa28.21■■■□□ 2.11
CNKSR1-212ENST00000528281 LMTK3Q96Q04 1460 aa28.21■■■□□ 2.11
CNKSR1-212ENST00000528281 ZNF644Q9H582 1327 aaPredicted RBP28.2■■■□□ 2.11
CNKSR1-212ENST00000528281 PLPPR3Q6T4P5 718 aa28.2■■■□□ 2.1
CNKSR1-212ENST00000528281 MBD5Q9P267 1494 aa28.18■■■□□ 2.1
CNKSR1-212ENST00000528281 CAMSAP2Q08AD1 1489 aa28.12■■■□□ 2.09
CNKSR1-212ENST00000528281 PLXNC1O60486 1568 aa28.11■■■□□ 2.09
CNKSR1-212ENST00000528281 ADGBQ8N7X0 1667 aa28.1■■■□□ 2.09
CNKSR1-212ENST00000528281 A2MP01023 1474 aa28.1■■■□□ 2.09
CNKSR1-212ENST00000528281 ESF1Q9H501 851 aaKnown RBP28.1■■■□□ 2.09
CNKSR1-212ENST00000528281 RTEL1-TNFRSF6BF6WH68 1400 aa28.09■■■□□ 2.09
CNKSR1-212ENST00000528281 CEBPAP49715 358 aaPredicted RBP28.09■■■□□ 2.09
CNKSR1-212ENST00000528281 KANK4Q5T7N3 995 aaPredicted RBP28.09■■■□□ 2.09
CNKSR1-212ENST00000528281 RSPH4AQ5TD94 716 aa28.08■■■□□ 2.09
CNKSR1-212ENST00000528281 C3P01024 1663 aa28.07■■■□□ 2.08
CNKSR1-212ENST00000528281 PREX1Q8TCU6 1659 aa28.07■■■□□ 2.08
CNKSR1-212ENST00000528281 CCDC141Q6ZP82 1450 aa28.07■■■□□ 2.08
CNKSR1-212ENST00000528281 CNTLNQ9NXG0 1405 aa28.06■■■□□ 2.08
CNKSR1-212ENST00000528281 SETD1BQ9UPS6 1966 aaKnown RBP28.04■■■□□ 2.08
CNKSR1-212ENST00000528281 ARHGEF5Q12774 1597 aa28.03■■■□□ 2.08
CNKSR1-212ENST00000528281 APLP2Q06481 763 aa28.02■■■□□ 2.08
CNKSR1-212ENST00000528281 MROH2AA6NES4 1674 aa28.01■■■□□ 2.07
CNKSR1-212ENST00000528281 HSPA2P54652 639 aa28.01■■■□□ 2.07
CNKSR1-212ENST00000528281 MYOM3Q5VTT5 1437 aa27.99■■■□□ 2.07
CNKSR1-212ENST00000528281 MIA2Q96PC5 1412 aa27.99■■■□□ 2.07
CNKSR1-212ENST00000528281 DHX29Q7Z478 1369 aaKnown RBP27.97■■■□□ 2.07
CNKSR1-212ENST00000528281 UHRF1BP1Q6BDS2 1440 aa27.96■■■□□ 2.07
CNKSR1-212ENST00000528281 TSPY4P0CV99 314 aa27.94■■■□□ 2.06
CNKSR1-212ENST00000528281 TSPY10P0CW01 314 aa27.94■■■□□ 2.06
CNKSR1-212ENST00000528281 CLTCQ00610 1675 aaKnown RBP27.94■■■□□ 2.06
CNKSR1-212ENST00000528281 GGT6Q6P531 493 aa27.93■■■□□ 2.06
CNKSR1-212ENST00000528281 PPP6R1Q9UPN7 881 aa27.93■■■□□ 2.06
CNKSR1-212ENST00000528281 ZMYM3Q14202 1370 aa27.92■■■□□ 2.06
CNKSR1-212ENST00000528281 MAST1Q9Y2H9 1570 aa27.9■■■□□ 2.06
CNKSR1-212ENST00000528281 NPATQ14207 1427 aa27.89■■■□□ 2.06
CNKSR1-212ENST00000528281 KIF3BO15066 747 aa27.84■■■□□ 2.05
CNKSR1-212ENST00000528281 ILDR1Q86SU0 546 aaPredicted RBP27.84■■■□□ 2.05
CNKSR1-212ENST00000528281 PTPN23Q9H3S7 1636 aa27.82■■■□□ 2.04
CNKSR1-212ENST00000528281 FAM135AQ9P2D6 1515 aa27.81■■■□□ 2.04
CNKSR1-212ENST00000528281 STRCQ7RTU9 1775 aa27.81■■■□□ 2.04
CNKSR1-212ENST00000528281 PTPRKQ15262 1439 aa27.79■■■□□ 2.04
CNKSR1-212ENST00000528281 FGD6Q6ZV73 1430 aa27.77■■■□□ 2.04
CNKSR1-212ENST00000528281 KDM5DQ9BY66 1539 aa27.77■■■□□ 2.04
CNKSR1-212ENST00000528281 CROCC2H7BZ55 1655 aa27.76■■■□□ 2.03
CNKSR1-212ENST00000528281 DMRT2Q9Y5R5 561 aa27.75■■■□□ 2.03
CNKSR1-212ENST00000528281 TCOF1Q13428 1488 aaKnown RBP27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms